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PROGRAMMED CELL DEATH
In the mid-1960s, cell death occurring during tadpole development recognized as an actively
controlled mechanism i.e., PCD.
(Tata, 1966)
Morphogenesis of Frog
Tadpole Frog
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PROGRAMMED CELL DEATH
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PROGRAMMED CELL DEATH
FLOW
OF
SEMINAR
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2
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INTRODUCTION TO PROGRAMME CELL DEATH
REGULATION AND MECHANISMS OF PROGRAMMED CELL DEATH
PROGRAMMED CELL DEATH IN PLANTS
REGULATION AND MECHANISM OF PCD PLANTS
PCD IN REPRODUCTIVE DEVELOPMENT IN PLANTS
PCD IN VEGETATIVE DEVELOPMENT AND SENESCENCE IN PLANTS
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CASE STUDIES AND CONCLUSION
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PROGRAMMED CELL DEATH
 The number of cells in a body of organism is tightly regulated. Its not only the
control over cell division but also on rate of cell death.
 Controlled cell death is needed for normal development and good health
throughout life along with normal development of cells and cell cycle maturation.
INTRODUCTION
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PROGRAMMED CELL DEATH
 APOPTOSIS: Genetically programmed
process of deliberate sucide by an
unwanted cell in a multicellular
organism.
 AUTOPHAGY : Plays a housekeeping
role in removing misfold proteins,
clearing damaged organelles as well as
eliminating intracellular pathogens.
 NECROSIS : Non-programmed cell
death, death of a cell caused by external
factors such as trauma or infection.
 NECROPTOSIS : Programmed form
of necrosis.
 ONCOSIS: Series of cellular reactions
following injury that ultimately leads to
cell death.
CELL DEATH
NECROSIS NECROPTOSIS ONCOSIS
AUTOPHAGY APOPSTOSIS
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PROGRAMMED CELL DEATH
 Often occurs when the structure they form is no longer needed.
 To eliminate abnormal cells, cells that non-functional or potentially dangerous
to the animal.
 Cell death can prevent viral replication because they need a cell alive to
reproduce.
 Failure of cells to die or cells dying when they shouldn’t can lead to many
diseases.
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PROGRAMMED CELL DEATH
 Cell death occur in many ways.
1.Infection
2.Poisioning
3.Lack of oxygen
 An uncontrolled death messy. In this cells swells up and its contents leak away.
This may damage surrounding cells too.
 On the other hand, there is another tidier way to go, i.e., Programmed cell death
or apopstosis, in which cell often choose to kill themselves.
Programmed cell death
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PROGRAMMED CELL DEATH
 Programmed cell death (PCD) has been defined as a sequence of (potentially
aainterruptible) events that lead to the controlled and organized destruction of the
aacell.
 Synonyms = Chromatolysis, Karyolysis, Karyohexis, Shrinkage necrosis,
Programmed cell death, Cell suicide, Self destruction and Apoptosis.
 The term apoptosis –A Greek word originally means that “fall of the leaf or
leaf falling”. (John et al., 1972)
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PROGRAMMED CELL DEATH
Doctoral Research
 “Programmed Cell Death,”
that were published between
1964 and 1965 in the Journal
of Insect Physiology.
The Nobel Prize in Physiology or Medicine 2002 was awarded jointly to Sydney
Brenner, H. Robert Horvitz and John E. Sulston "for their discoveries concerning
genetic regulation of organ development and programmed cell death'."
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PROGRAMMED CELL DEATH
 Apoptosis refers to active, programmed cell death.
 Individual cells are induced to commit suicide
Characteristics of Apoptosis
 Cell membrane blebbing
 Cell shrinkage
 Chromatin condensation
 Chromosomal DNA fragmentation
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PROGRAMMED CELL DEATH
 During viral infections.
 During DNA damage.
 To make way for new cells.
Ex: In the womb, our fingers and toes are connected to one another by a sort of
webbing. Apopstosis is what causes that webbing to disappear, leaving us with 10
separate digits.
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PROGRAMMED CELL DEATH
 It is not only confined to animals, in plants also it occurs during development and
in the senescence of flowers and leaves.
 Programmed cell death is also necessary to prevent from effect of spurious
infection in plants.
 PCD also occurs in unicellular organisms including yeasts and bacteria.
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PROGRAMMED CELL DEATH
WHAT IS THE PURPOSE OF
THIS PCD ?
 Developmental PCD:
 Essential for successful development & growth of complex multicellular organisms.
 Regulates the rate of cell division.
 Shaping of cells, tissues & organs.
 Defensive PCD:
 Control of cell populations & defense against invading microbes.
 PCD is needed to destroy the cells that represent a threat to the integrity of the
organism.
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PROGRAMMED CELL DEATH
Huang et al., 2019
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PROGRAMMED CELL DEATH
Huang et al., 2019
Schematic representation of difference between Necrosis and Apoptosis
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PROGRAMMED CELL DEATH
 Apoptosis is a tightly regulated and
efficient cell death program involving
multiple factors.
 Caspases take major and a central role in
apoptotic mechanism.
 Contain key cysteine residue at catalytic
site.
 Cleave protein at site just C-terminal to
aspartate residue.
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PROGRAMMED CELL DEATH
Active
Caspase
Inactive
procaspase
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PROGRAMMED CELL DEATH
BCl-2 family
proteins
Pro-apoptopic
Promote apoptosis
BH123 proteins
(Bax, Bak)
BH 3-only proteins
(Bid, Bim, Bik, Bad,
PUMA, NOXA)
Anti-apoptopic
Inhibit apoptosis
(Bcl-2, Bcl-XL, Mcl-1, Bcl-1)
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PROGRAMMED CELL DEATH
Jones et al., 2001
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PROGRAMMED CELL DEATH
There are two basic PCD or apoptotic pathways
▫ Intrinsic pathway
▫ Extrinsic pathway
PCD
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PROGRAMMED CELL DEATH
Image representing the PCD events in the cell Azwali etal.,2019
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PROGRAMMED CELL DEATH
 Cell activate their apoptopic
programs from inside the cell in
response to injury or other
stresses like DNA damage or lack
of oxygen, nutrients or free
radicals, growth factors
deprivation.
 Mitochondria dependent pathway.
Azwali etal.,2019 4/6/2022 23
PROGRAMMED CELL DEATH
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PROGRAMMED CELL DEATH
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PROGRAMMED CELL DEATH
 Extracellular signal proteins binds to
cell surface death receptors that trigger
the extrinsic pathway.
 Death receptors are transmembrane
proteins having extracellular ligand
binding domain, transmembrane
domain and an intracellular death
domain which activated the apoptopic
program.
Azwali etal.,2019
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PROGRAMMED CELL DEATH
 Fas ligand on cells binds to Fas receptor on
target cell.
 Death domains then recruits intracellular
adaptor proteins-
 FADD (Fas ligand associated death domain)
 It then recruits pro caspase 8 or 10, forming
DISC (Death Inducing Signalling Complex)
 Activation or cleavage of procaspase 8 or 10.
 Formation of Caspase 8 or 10
 Caspase 3 activation
 Execution of apoptosis.
Azwali etal.,2019
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PROGRAMMED CELL DEATH
 In plants, the vacuole is responsible for lytic activity which
leads to the removal of organelles and cell corpses.
 In plants, different types of PCD
1. ePCD ( Environment stress dependent)
It is triggered by external insults which include pathogen
attack as well as abiotic stress, such as heat stress, salinity,
drought, and flooding.
2. dPCD (vegetative and reproductive development )
It is generally autolytic, as happens in xylem tracheary
formation, where cytoplasm clearance is required for vessel
functionality.
Daneva etal.,2016
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PROGRAMMED CELL DEATH
 Plants activate PCD in senescent tissues, such as leaves, petals, sepals, in order
to recycle nutrients before eliminating the tissues that are no longer required.
 Differentiation-induced dPCD occurs as an inherent final differentiation step of
particular cell types, e.g., xylem, anther tapetum, or root cap cells. Some cell
types, however, can initiate dPCD in a facultative fashion.
 Finally, age-induced dPCD occurs in all cell types of organs or even entire
organisms as the end point of plant senescence.
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PROGRAMMED CELL DEATH
 On the other hand, plants can fail to activate defense responses against abiotic
stress and as consequence activate PCD.
 This happens when the stress-dependent metabolic impairment overwhelms the
plant’s ability to restore the physiological background and/or counteract the
derived oxidative stress.
DROUGHT STRESS FLOODING HEAT STRESS 4/6/2022 30
PROGRAMMED CELL DEATH
MECHANISTIC PRINCIPLES PUTATIVELY INVOLVED IN THE CONTROL
OF PROGRAMMED CELL DEATH IN PLANTS
Hautegem et al., 2015
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PROGRAMMED CELL DEATH
PCD Classes EXAMPLES
AUTOLYTIC
• Rapid cytoplasm clearance after tonoplast rupture & replaced by
vacuolar volume
DevelopmentalPCD
• Similar to autophagy in animal
• For example, PCD that occurs during the formation of the male and
female zygotes, in embryonic structures, and during development of
roots and shoots.
• Mild abiotic stress, such as lack of oxygen and drought.
NON- AUTOLYTIC
• Death occurs prior to tonoplast rupture or tonoplast rupture does not
occur or tonoplast rupture is not followed by complete clearance of
the cytoplasm
• Hypersensitiveresponse(HR)-related PCD
• Endosperm in cereal seeds is an example (no tonoplast rupture)
Vandroon etal.,2011
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PROGRAMMED CELL DEATH
• During viral infection, the tonoplast is lysed with the release of lytic enzymes
of vacuoles into the cytosol.
• The vacuole tonoplast fuse with the plasmalemma to release vacuolar contents
extracellularly, or it disintegrate to release its contents to the cytosol.
• Induction of rapid cell death pathways may be an effective way of cleansing
cytoplasm from viral growth.
• Sudden release of vacuolar contents into the cytoplasm causes rapid cell death as
was also noted for the HR response to TMV in tobacco.
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PROGRAMMED CELL DEATH
 The impairment of the pathways increases the production of reactive oxygen and
nitrogen species (ROS and RNS) in the cell. When the plant fails to counteract.
 The metabolic imbalance leading to the overproduced reactive species, it activates PCD.
 Several plant hormones are also involved in the induction of both dPCD and ePCD:
salicylic acid is required in HR cell death, ethylene in aerenchyma formation and tissue
senescence, gibberellin in endosperm/aleurone development.

PCD PHASES IN PLANTS
Daneva etal.,2016
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PROGRAMMED CELL DEATH
• Plant proteases: Metacaspases
Type 1: Metacaspases (AtMC1,AtMC2)
Type 2: Metacaspases (AtMC4,AtMC 9)
• Subtilisin- like serine proteases, VPE (vacuolar processing enzyme) family of
proteases.
• Bcl-2 associated athanogene (BAG) family: It is an evolutionary conserved family of
co-chaperons in plants and animals distinguished by a characteristics BAG domain
that mediates direct interaction with HSP70.
• Hypersensitive mediated PCD: Rapid localised plant cell death upon contact with
avirulent pathogens.
• Necrotrophic pathogen mediated cell death: Death of cell caused by hydrolytic
enzymes and host selective toxins.
Vartapetian etal.,2011
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PROGRAMMED CELL DEATH
• Proteolytic enzymes that are involved in
PCD are localized in different
compartments of plant cells:
• Cytoplasm (metacaspases)
• Vacuoles (VPE)
• Intercellular fluid (phytaspases).
Vartapetian etal.,2011
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PROGRAMMED CELL DEATH
Jones etal., 2001
Azwali etal.,2019
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PROGRAMMED CELL DEATH
PCD FEATURES ANIMALS PLANTS
Cell shrinkage Yes Yes
Chromatin condensation Yes Yes
Phosphotidylserine externalization Yes Yes
DNA laddering Yes Yes
TUNELS-DNA cleavage Yes Yes
Caspases Yes No
Mitochondria permabilization Yes Yes
Mitochondria depolarization Yes Yes
Cytochrome c release Yes Yes
Cytochrome c–dependent activation of cell death Yes No
Apoptotic bodies Yes Yes
Vacuole leakage and fusion with plasmalemma No Yes
Cell shrinkage Yes Yes
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PROGRAMMED CELL DEATH
REPRODUCTIVE STAGE
 Gametophyte development.
 Megaspore cell death
 Cell death of the nucellar tissue
 Antipodal cell death
 Tapetum cell death
 Cell death in sex determination
 Self-incompatibility-induced cell
death.
VEGETATIVE STAGE
 Xylogenesis
 Lateral Root Cap Differentiation
 Aerenchyma Formation
 Leaf Morphogenesis
 Organ Abscission and Dehiscence
 Leaf Senescence
 Floral Organ Senescence
Pennel etal.,1997
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PROGRAMMED CELL DEATH
PCD IN REPRODUCTIVE DEVELOPMENT IN PLANTS
Megaspore cell death Cell death of the nucellar
tissue
Tapetum cell death.
• The selection of the functional megaspore is position-
dependentand varies between species.
• The deletion of the functional megaspores is important
for optimal seed development.
• In Arabidopsis (Arabidopsis thaliana), the arabinogalactan
protein AGP18is expressed during meiosis in the abaxial
pole of the ovule.
• Callose deposition.
GAMETOPHYTE DEVELOPMENT
Daneva etal., 2016
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PROGRAMMED CELL DEATH
Cell death of the nucellar
tissue
• In the degenerating nucellar tissue of castor bean
(Ricinus communis L.), proteomic analyses
identified multiple proteases and protease
inhibitors (Nogueira et al. 2012).
• Nuclear condensation and DNA fragmentation
indicative of PCD have been observed in the
nucellus of wheat (Triticum aestivum L.)
Tapetum cell death.
• Precise timing of tapetum degeneration is crucial for pollen
maturation.
• The phytohormone gibberellic acid (GA) regulates tapetum
differentiation and dPCD through GA-regulated
myeloblastosis (GAMYB) TFs in rice and their homologues
MYB33 and MYB65 in Arabidopsis.
Kurusu etal.,2017
GAMETOPHYTE DEVELOPMENT
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PROGRAMMED CELL DEATH
Maize produces separate unisexual flowers through programed abortion of preformed organ primordia. In
the male inflorescence (tassel), stamen primordia develop to sexual maturity, while gynoecia (pistil
primordia) are aborted.
• TS2 encodes a dehydrogenase/reductase domain–containing, NAD(P)- binding Rossmann-fold protein. Shortly
before abortion of the gynoecium, TS2 mRNA is expressed subepidermally in that primordium and thus gynoecium is
aborted through PCD.
• In tasselseed2 (Ts2) mutant plants, floral structures in the tassel adopt a female developmental program.
• Dependent on the lipoxygenase-encodingTS1 gene, TS2 mRNA accumulates in all pistils, but in the female
inflorescence pistils survive protected from PCD by the action of the SILKLESS1 gene.
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PROGRAMMED CELL DEATH
Self-incompatibility-induced cell
death
Transmitting tract cell
death.
Synergid cell death and pollen tube
rupture
PCD IN FERTILIZATION
Daneva etal., 2016
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PROGRAMMED CELL DEATH
PCD IN FERTILIZATION
Self-incompatibility-induced cell
death
Transmitting tract cell
death.
Synergid cell death and pollen tube
rupture
• SI in poppy (Papaver rhoeas) is controlled by a small, secreted
stigma protein, PrsS, and a pollen membrane protein, PrpS, the
interaction of which induces a calcium-triggered signaling network
that leads to growth arrest and PCD of the incompatible PTs.
(Eaves et al., 2014).
• Actin depolymerization, ROS signaling, caspase-like protease
activities and DNA fragmentation.
• A drop of cytoplasmic pH in incompatible pollen.
• The poppy SI system was successfully transferred to the self-
compatible A. thaliana, suggesting that PrsS and PrpS factors can
signal to a conserved PCD network in A. thaliana pollen.
( Lin et al., 2015).
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PROGRAMMED CELL DEATH
Self-incompatibility-induced cell
death
Transmitting tract cell
death.
Synergid cell death and pollen tube
rupture
Transmitting tract cell
death.
• The transmitting tract (TT) is a specialized
tissue that guides and supports PT growth toward the ovule.
• In A. thaliana, TT cell death starts before anthesis and can
be accelerated by pollination.
• It has been proposed that pollination-induced TT PCD is
activated by ethylene signaling and mRNA poly(A)
tail shortening.
(Crawford et al., 2007)
PCD IN FERTILIZATION
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PROGRAMMED CELL DEATH
Self-incompatibility-induced cell
death
Transmitting tract cell
death.
Synergid cell death and pollen tube
rupture
PCD IN FERTILIZATION
Synergid cell death and pollen tube
rupture
• The Rsyn undergoes cell death upon arrival of the PT. The
subsequent rupture of the PT, releasing two sperm cells
into the female gametophyte, represents a second controlled
cell death event during PT and Rsyn interaction.
• In A. thaliana, Rsyn cell death is thought to be elicited by
short-range signaling between PTs and Rsyn.
• In the female gametophyte mutant gametophytic factor 2
(gfa2), ovules remain unfertilized because PT penetration
and Rsyn cell death do not occur.
(Leydon et al., 2015)
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PROGRAMMED CELL DEATH
PCD IN SEED DEVELOPMENT
 In the large suspensor of the runner bean (Phaseolus coccineus), tissue degeneration in
the suspensor is marked by DNA fragmentation, by activation of caspase-like proteases,
and by cytochrome c release from mitochondria.
Embryonic suspensor cell
death
Endosperm cell
death
Seed coat cell
death
Aleurone PCD
 In many species, the embryo-surrounding region (ESR) breaks down during mid-seed
development to provide space for the growing embryo. In cereals, the starchy endosperm
(SE) undergoes a PCD after seed filling.
 Integument PCD is by cysteine protease which is specifically expressed in two
integument layers.
 In the innermost integument layer, PCD is characterized by vacuolar collapse and nuclear
fragmentation and is regulated by PROTEIN DISULFIDE ISOMERASE 5 (PDI5).
 Cereal aleurone PCD is controlled by phytohormones: the PCD-promoting GA and the
antagonistically acting ABA. Downstream of GA and ABA, a number of TFs, proteases,
nucleases, and vesicular trafficking regulators have been implicated in aleurone PCD
Daneva etal., 2016
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PROGRAMMED CELL DEATH
PCD IN VEGETATIVE
DEVELOPMENT
Xylogenesis and Root cap
differentiation
Aerenchyma formation Leaf Morphogenesis
Daneva etal., 20164/6/2022 48
PROGRAMMED CELL DEATH
 PCD of xylem tracheids and tracheary elements (TEs) culminates
in protoplast clearance, producing interconnected hollow cell
corpses with reinforced cell walls.
 TE differentiation encompasses the subsequent phases of
secondary cell wall (SCW) deposition, PCD, protoplast
autolysis, and SCW lignification.
 Various hormones, including brassinosteroids and ethylene,
initiate TE differentiation and dPCD.
 The root cap consists of a central columella and a
peripheral lateral root cap (LRC).
 The constant size and location of the LRC at the growing
root tip are maintained by rapid cellular turnover.
 The continuous generation of new LRC layers by specific
stem cells is counterbalanced by tightly controlled dPCD
that eliminates cells at the root cap edge
LATERAL ROOT CAP
DIFFERENTIATION
Daneva etal., 2016 4/6/2022 49
PROGRAMMED CELL DEATH
AERENCHYMA FORMATION
 The formation of lysigenous aerenchyma mediated by PCD occurs constitutively in
wetland species and can be induced by oxygen deprivation in waterlogged plants.
• Hypoxia (Oxygen deprivation)
• Cell death can occur in the cortex of the root and stem base
in response to water logging and hypoxia.
• It leads to ROS (H2O2, ethylene).
• Ethylene triggers apoptotic pathway- eliminate some cells-
aerenchyma.
• The internal air spaces generated by cell death facilitate
more efficient transfer of oxygen from aerial organs to
waterlogged stem base and roots.
Daneva etal., 2016 4/6/2022 50
PROGRAMMED CELL DEATH
LEAF MORPHOGENESIS
 Perforation PCD occurs between the leaf veins, creating the fenestrate
pattern of mature lace plant leaves. Tonoplast rupture is the first evident
PCD feature to occur, followed by DNA fragmentation, changes in
nuclear morphology, cytoplasmic shrinkage, and organelle dismantling.
 Ethylene Response Sensor 1 (ERS1)-mediated ethylene sensitivity.
 Downstream of ethylene, caspase-1-like activities triggered by the
release of a mitochondrial signal have been detected.
(Rantong et al., 2015).
Leaf morphogenesis in
monstera plant
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PROGRAMMED CELL DEATH
PCD IN LACE PLANT
Aponogeton madagascariensis which is
known as the Madagascar Lace Plant ,
decorative aquatic plant – skeleton
like appearance
• PCD process starts in young leaves between leaf veins
• Alterations in the actin cytoskeleton
• Chloroplast accumulation around the nucleus
• Organelles are taken up into the vacuole in membrane
bound vesicles - autophagy
– Loss of mitochondrial membrane potential
– DNAfragmentation,
– Activation of caspase-like proteases
– Before vacuolar collapse, plasma membrane rupture
and cell wall degradation occurs
• Perforation PCD occurs between the leaf veins, creating
the fenestrate pattern of mature lace plant leaves.
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PROGRAMMED CELL DEATH
PCD AS THE END POINT OF
SENESCENCE
Plant senescence controls nutrient remobilization during stress or age induced
degeneration of tissues, organs, or entire organisms, concluding the life cycle of
plant species.
Leaf senescence Floral organ senescence 4/6/2022 53
PROGRAMMED CELL DEATH
LEAF SENESCENCE
 Ethylene promotes senescence
 ETHYLENE-INSENSITIVE2 (EIN2) activates EIN3
expression
 EIN3 upregulates the NAC TF ORESARA1/ANAC092
(ORE1) and other TFs and concurrently represses
miR164.
 ORE1 activates the expression of senescence-promoting
TFs
 ORE1 inhibits the activity of the chloroplast-supporting
TFs GOLDEN-LIKE1 (GLK1) and GLK2.
 Promotes the expression of dPCD-associated genes such
as BFN1.
 BFN1 localization has been associated with DNA
degradation in aging leaf protoplasts
Leaf senescence
Leaf senescence and dPCD are linked by the trifurcate pathway downstream of ethylene
Kim et al., 2014
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PROGRAMMED CELL DEATH
FLORAL ORGAN SENESCENCE
 In rose flowers, miR164 expression decreased with age and upon
ethylene treatment, suggesting that the trifurcate ethylene pathway
is also functional in floral organ senescence.
 The A. thaliana MADS-box TF FOREVER YOUNG FLOWER
(FYF) negatively regulates the expression of several senescence-
promoting ethylene response DNA-binding factors (EDFs) in both
pollinated and senescing flowers.
 Plants with constitutive expression of EDF manifest significant
upregulation of senescence-associated genes, PCD associated
VPEs, and metacaspase genes.
Floral organ senescence and dPCD are also linked by the trifurcate pathway downstream of ethylene
Floral organ senescence
Pei et al., 2013
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PROGRAMMED CELL DEATH
OVERVIEW OF MOLECULAR REGULATORS DIRECTLY OR INDIRECTLY INVOLVED IN PLANT DPCD
Hautegem etal., 2015
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PROGRAMMED CELL DEATH
 It is commonly known that animal pathogens often target and
suppress programmed cell death (PCD) pathway components to
manipulate their hosts.
 In contrast, plant pathogens often trigger PCD. In cases in which
plant PCD accompanies disease resistance, an event called the
hypersensitive response.
 HR cell death is an active process in which the accumulation of 02
-
and H202 leads to an elevation in cytosolic Ca2+ and triggers a
protein kinase-mediated cell death process that is similar
physiologically to PCD.
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PROGRAMMED CELL DEATH
Taiz and Zeiger, 1991
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PROGRAMMED CELL DEATH
 The first line of defense in both plants and
animals is provided by pattern recognition
receptors (PRRs)
 They recognize microbe or danger associated
molecular patterns (MAMPs and DAMPs,
respectively).
 Trigger immune signaling.
Representation of Programmed cell death in the plant immune system
Coll et al., 2011 4/6/2022 59
PROGRAMMED CELL DEATH
 The morphology of cells undergoing the HR at late stages suggest that it is a form
of PCD with some apoptotic features.
 Membrane dysfunction (loss of ability to be plasmolysed) and progressive
vacuolization of the cytoplasm.
 There was a gap in the time course in which these events may have occurred.
Thus, the HR in this system has a subset of apoptotic features.
 Apoptosis-related events such as mitochondrial swelling, chromatin condensation
and endonucleolytic cleavage occur before general organelle dysfunction.
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PROGRAMMED CELL DEATH
 This would be expected if the HR occurs by an apoptotic-like
mechanism.
 In particular, apoptotic like bodies with avirulent Pseudomonas
syringae infections were observed.
(Levine et al., 1996).
 It was found early changes in mitochondrial morphology
(swelling and cristae disorganization) in avirulent P. syringae-
infected lettuce, similar to what occurs in animal cells
undergoing apoptosis.
(Wakabaashi et al., 2001).
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PROGRAMMED CELL DEATH
AIM :
 To provide evidence for involvement of chloroplast as alternate organelle for initiating
PCD in plants under light and abiotic stress.
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PROGRAMMED CELL DEATH
 Materials and methods:
 Plant material and growth conditions:
Pusa basmati-1 which has been certified as salt sensitive cultivar.
Seeds were soaked were incubated in dark another 3 days for germination.
1. 30 °C and light period 16 h and 8h dark
2. Kept in dark at same temperature
 Isolation of protoplasts and salt treatment
Protoplasts were isolated from the leaves of green and etiolated rice seedlings grown for
7d on respective growth conditions. Isolated protoplasts were subjected to 150 mM NaCl
for different time points.
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PROGRAMMED CELL DEATH
Fig 1: Evans blue staining of the protoplasts to count viability
Protoplast isolated from seddlings in light (A,B) Protoplast isolated from etiolated seedlings (C,D)
Salt stress induces cell death in protoplasts isolated from green and
etiolated rice seedlings
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PROGRAMMED CELL DEATH
Fig 2: Light and protease dependency of salt induced cell death
Salt stress induced cell death is light dependent and Cystein protease mediated
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PROGRAMMED CELL DEATH
SALINITY-INDUCED CELL DEATH IS MEDIATED BY CELLULAR ROS
 Results demonstrate that untreated protoplasts isolated from green leaves generated H2O2 that was
almost double of that generated from cells prepared from etiolated leaves.
Fig 3: ROS generation during salt induced cell death.
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PROGRAMMED CELL DEATH
SALT STRESS-INDUCED CELL DEATH IS APOPTOSIS LIKE CELL DEATH (AL-PCD)
Fig 4: Identification of cell membrane blebbing and nuclear loabing during salt stress.
A) Green protoplasts untreated B) 2h salt treated green protoplasts. C) 4h salt treated green protoplasts. D) 6h salt treated green
protoplasts.
A) bright field image B) Acridine orange C) ethidium bromide staining D) merge of b and c
4/6/2022 67
PROGRAMMED CELL DEATH
EVIDENCE FROM ULTRA-STRUCTURE STUDIES
CHLOROPLASTS ARE PREFERRED TARGET DURING SALT STRESS INDUCED PCD
Fig 5: Ultra structural changes in chloroplast and mitochondria during salt induced cell death.
 As this study attempt has been made to understand the mechanism of salt-stress-
induced PCD and involvement of chloroplasts in the execution of the termination
event.
 The results clearly demonstrate that in salt-treated etiolated and green protoplasts,
cell death is accentuated by light. Thus, suggesting the involvement of etio
chloroplasts and chloroplasts in cell death that is modulated by light.
4/6/2022 68
PROGRAMMED CELL DEATH
AIM :
 To investigate the role of CEP1 in anther development and to identify whether it is the
crucial executor during tapetal PCD which is necessary for timely degeneration of tapetal
cells and functional pollen formation.
Papain-like cysteine proteases, CEP1, CEP2, and CEP3, are expressed in Arabidopsis
roots, flowers, and green siliques where the cells are about to collapse.
4/6/2022
69
PROGRAMMED CELL DEATH
 Materials and methods:
 Plant material and growth conditions:
 Arabidopsis thaliana accession Columbia-0
 Arabidopsis thaliana (Wild, Control)
 Plants were grown on a soil mixture (3:1:1 mixture of peat moss-enriched soil:
vermiculite: perlite) with a 14-h-light/10-h-dark photoperiod at 23°C.
4/6/2022 70
PROGRAMMED CELL DEATH
Identification of the cep1 Mutant
Fig 1: image representing SALK_094934 and SALK_013036 T-DNA insertion positions in
At5g50260. Filled boxes represent exons.
Fig 2. Comparison of the Wild Type and the cep1 Mutant
4/6/2022 71
PROGRAMMED CELL DEATH
EXPRESSION CHARACTERIZATION OF CEP1 IN ARABIDOPSIS
Fig 3. CEP1 spatial and temporal expression analyses by RT-PCR. fl-flower; le-leaf; ro-root and st-stem.
4/6/2022 72
PROGRAMMED CELL DEATH
ANTHER DEVELOPMENT IN THE CEP1 MUTANT
 Figure 4. Transverse Section Comparison of Anther Development in the Wild Type and cep1 Mutant
Anther maturation was abnormal in the cep1 mutant, particularly tapetal degeneration and pollen development.
4/6/2022 73
PROGRAMMED CELL DEATH
Figure 5. Transmission Electron Micrographs of Microspores from the Wild Type and cep1 Mutant
In cep1 mutant, pollen development was impaired, resulting in defective pollen exine, abnormal pollen shape, and
collapsed pollen grains. Thus CEP1 is important for proper pollen development.
4/6/2022 74
PROGRAMMED CELL DEATH
 Tapetal programmed cell death (PCD) is a prerequisite for pollen grain development in
angiosperms, and cysteine proteases are the most ubiquitous hydrolases involved in plant
PCD.
 CEP1 is expressed specifically in the tapetum from stages 5 to 11 of anther development.
 As they characterized the phenotype of the cep1 mutant, CEP1 expression in Arabidopsis,
enzymatic characteristics of CEP1 in vitro, between the wild type and cep1 mutant showed
there is a normal pollen development in the wild than the mutant .
 Results indicate that CEP1 acts as an irreplaceable executor during tapetal cell PCD,
which regulates pollen development.
4/6/2022 75
PROGRAMMED CELL DEATH
THE BUCKET LIST:
THINGS TO DO BEFORE YOU
DIE
4/6/2022 76
PROGRAMMED CELL DEATH
PCD is like a SOLDIERS who can
sacrifice their LIFE for others
GROWTH and DEVELOPMENT..,
4/6/2022 77
PROGRAMMED CELL DEATH

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Pcd 4 th seminar

  • 2. In the mid-1960s, cell death occurring during tadpole development recognized as an actively controlled mechanism i.e., PCD. (Tata, 1966) Morphogenesis of Frog Tadpole Frog 4/6/2022 2 PROGRAMMED CELL DEATH
  • 4. FLOW OF SEMINAR 1 2 3 4 5 6 INTRODUCTION TO PROGRAMME CELL DEATH REGULATION AND MECHANISMS OF PROGRAMMED CELL DEATH PROGRAMMED CELL DEATH IN PLANTS REGULATION AND MECHANISM OF PCD PLANTS PCD IN REPRODUCTIVE DEVELOPMENT IN PLANTS PCD IN VEGETATIVE DEVELOPMENT AND SENESCENCE IN PLANTS 4/6/2022 4 CASE STUDIES AND CONCLUSION 7 PROGRAMMED CELL DEATH
  • 5.  The number of cells in a body of organism is tightly regulated. Its not only the control over cell division but also on rate of cell death.  Controlled cell death is needed for normal development and good health throughout life along with normal development of cells and cell cycle maturation. INTRODUCTION 4/6/2022 5 PROGRAMMED CELL DEATH
  • 6.  APOPTOSIS: Genetically programmed process of deliberate sucide by an unwanted cell in a multicellular organism.  AUTOPHAGY : Plays a housekeeping role in removing misfold proteins, clearing damaged organelles as well as eliminating intracellular pathogens.  NECROSIS : Non-programmed cell death, death of a cell caused by external factors such as trauma or infection.  NECROPTOSIS : Programmed form of necrosis.  ONCOSIS: Series of cellular reactions following injury that ultimately leads to cell death. CELL DEATH NECROSIS NECROPTOSIS ONCOSIS AUTOPHAGY APOPSTOSIS 4/6/2022 6 PROGRAMMED CELL DEATH
  • 7.  Often occurs when the structure they form is no longer needed.  To eliminate abnormal cells, cells that non-functional or potentially dangerous to the animal.  Cell death can prevent viral replication because they need a cell alive to reproduce.  Failure of cells to die or cells dying when they shouldn’t can lead to many diseases. 4/6/2022 7 PROGRAMMED CELL DEATH
  • 8.  Cell death occur in many ways. 1.Infection 2.Poisioning 3.Lack of oxygen  An uncontrolled death messy. In this cells swells up and its contents leak away. This may damage surrounding cells too.  On the other hand, there is another tidier way to go, i.e., Programmed cell death or apopstosis, in which cell often choose to kill themselves. Programmed cell death 4/6/2022 8 PROGRAMMED CELL DEATH
  • 9.  Programmed cell death (PCD) has been defined as a sequence of (potentially aainterruptible) events that lead to the controlled and organized destruction of the aacell.  Synonyms = Chromatolysis, Karyolysis, Karyohexis, Shrinkage necrosis, Programmed cell death, Cell suicide, Self destruction and Apoptosis.  The term apoptosis –A Greek word originally means that “fall of the leaf or leaf falling”. (John et al., 1972) 4/6/2022 9 PROGRAMMED CELL DEATH
  • 10. Doctoral Research  “Programmed Cell Death,” that were published between 1964 and 1965 in the Journal of Insect Physiology. The Nobel Prize in Physiology or Medicine 2002 was awarded jointly to Sydney Brenner, H. Robert Horvitz and John E. Sulston "for their discoveries concerning genetic regulation of organ development and programmed cell death'." 4/6/2022 10 PROGRAMMED CELL DEATH
  • 11.  Apoptosis refers to active, programmed cell death.  Individual cells are induced to commit suicide Characteristics of Apoptosis  Cell membrane blebbing  Cell shrinkage  Chromatin condensation  Chromosomal DNA fragmentation 4/6/2022 11 PROGRAMMED CELL DEATH
  • 12.  During viral infections.  During DNA damage.  To make way for new cells. Ex: In the womb, our fingers and toes are connected to one another by a sort of webbing. Apopstosis is what causes that webbing to disappear, leaving us with 10 separate digits. 4/6/2022 12 PROGRAMMED CELL DEATH
  • 13.  It is not only confined to animals, in plants also it occurs during development and in the senescence of flowers and leaves.  Programmed cell death is also necessary to prevent from effect of spurious infection in plants.  PCD also occurs in unicellular organisms including yeasts and bacteria. 4/6/2022 13 PROGRAMMED CELL DEATH
  • 14. WHAT IS THE PURPOSE OF THIS PCD ?  Developmental PCD:  Essential for successful development & growth of complex multicellular organisms.  Regulates the rate of cell division.  Shaping of cells, tissues & organs.  Defensive PCD:  Control of cell populations & defense against invading microbes.  PCD is needed to destroy the cells that represent a threat to the integrity of the organism. 4/6/2022 14 PROGRAMMED CELL DEATH
  • 15. Huang et al., 2019 4/6/2022 15 PROGRAMMED CELL DEATH
  • 16. Huang et al., 2019 Schematic representation of difference between Necrosis and Apoptosis 4/6/2022 16 PROGRAMMED CELL DEATH
  • 17.  Apoptosis is a tightly regulated and efficient cell death program involving multiple factors.  Caspases take major and a central role in apoptotic mechanism.  Contain key cysteine residue at catalytic site.  Cleave protein at site just C-terminal to aspartate residue. 4/6/2022 17 PROGRAMMED CELL DEATH
  • 19. BCl-2 family proteins Pro-apoptopic Promote apoptosis BH123 proteins (Bax, Bak) BH 3-only proteins (Bid, Bim, Bik, Bad, PUMA, NOXA) Anti-apoptopic Inhibit apoptosis (Bcl-2, Bcl-XL, Mcl-1, Bcl-1) 4/6/2022 19 PROGRAMMED CELL DEATH
  • 20. Jones et al., 2001 4/6/2022 20 PROGRAMMED CELL DEATH
  • 21. There are two basic PCD or apoptotic pathways ▫ Intrinsic pathway ▫ Extrinsic pathway PCD 4/6/2022 21 PROGRAMMED CELL DEATH
  • 22. Image representing the PCD events in the cell Azwali etal.,2019 4/6/2022 22 PROGRAMMED CELL DEATH
  • 23.  Cell activate their apoptopic programs from inside the cell in response to injury or other stresses like DNA damage or lack of oxygen, nutrients or free radicals, growth factors deprivation.  Mitochondria dependent pathway. Azwali etal.,2019 4/6/2022 23 PROGRAMMED CELL DEATH
  • 26.  Extracellular signal proteins binds to cell surface death receptors that trigger the extrinsic pathway.  Death receptors are transmembrane proteins having extracellular ligand binding domain, transmembrane domain and an intracellular death domain which activated the apoptopic program. Azwali etal.,2019 4/6/2022 26 PROGRAMMED CELL DEATH
  • 27.  Fas ligand on cells binds to Fas receptor on target cell.  Death domains then recruits intracellular adaptor proteins-  FADD (Fas ligand associated death domain)  It then recruits pro caspase 8 or 10, forming DISC (Death Inducing Signalling Complex)  Activation or cleavage of procaspase 8 or 10.  Formation of Caspase 8 or 10  Caspase 3 activation  Execution of apoptosis. Azwali etal.,2019 4/6/2022 27 PROGRAMMED CELL DEATH
  • 28.  In plants, the vacuole is responsible for lytic activity which leads to the removal of organelles and cell corpses.  In plants, different types of PCD 1. ePCD ( Environment stress dependent) It is triggered by external insults which include pathogen attack as well as abiotic stress, such as heat stress, salinity, drought, and flooding. 2. dPCD (vegetative and reproductive development ) It is generally autolytic, as happens in xylem tracheary formation, where cytoplasm clearance is required for vessel functionality. Daneva etal.,2016 4/6/2022 28 PROGRAMMED CELL DEATH
  • 29.  Plants activate PCD in senescent tissues, such as leaves, petals, sepals, in order to recycle nutrients before eliminating the tissues that are no longer required.  Differentiation-induced dPCD occurs as an inherent final differentiation step of particular cell types, e.g., xylem, anther tapetum, or root cap cells. Some cell types, however, can initiate dPCD in a facultative fashion.  Finally, age-induced dPCD occurs in all cell types of organs or even entire organisms as the end point of plant senescence. 4/6/2022 29 PROGRAMMED CELL DEATH
  • 30.  On the other hand, plants can fail to activate defense responses against abiotic stress and as consequence activate PCD.  This happens when the stress-dependent metabolic impairment overwhelms the plant’s ability to restore the physiological background and/or counteract the derived oxidative stress. DROUGHT STRESS FLOODING HEAT STRESS 4/6/2022 30 PROGRAMMED CELL DEATH
  • 31. MECHANISTIC PRINCIPLES PUTATIVELY INVOLVED IN THE CONTROL OF PROGRAMMED CELL DEATH IN PLANTS Hautegem et al., 2015 4/6/2022 31 PROGRAMMED CELL DEATH
  • 32. PCD Classes EXAMPLES AUTOLYTIC • Rapid cytoplasm clearance after tonoplast rupture & replaced by vacuolar volume DevelopmentalPCD • Similar to autophagy in animal • For example, PCD that occurs during the formation of the male and female zygotes, in embryonic structures, and during development of roots and shoots. • Mild abiotic stress, such as lack of oxygen and drought. NON- AUTOLYTIC • Death occurs prior to tonoplast rupture or tonoplast rupture does not occur or tonoplast rupture is not followed by complete clearance of the cytoplasm • Hypersensitiveresponse(HR)-related PCD • Endosperm in cereal seeds is an example (no tonoplast rupture) Vandroon etal.,2011 4/6/2022 32 PROGRAMMED CELL DEATH
  • 33. • During viral infection, the tonoplast is lysed with the release of lytic enzymes of vacuoles into the cytosol. • The vacuole tonoplast fuse with the plasmalemma to release vacuolar contents extracellularly, or it disintegrate to release its contents to the cytosol. • Induction of rapid cell death pathways may be an effective way of cleansing cytoplasm from viral growth. • Sudden release of vacuolar contents into the cytoplasm causes rapid cell death as was also noted for the HR response to TMV in tobacco. 4/6/2022 33 PROGRAMMED CELL DEATH
  • 34.  The impairment of the pathways increases the production of reactive oxygen and nitrogen species (ROS and RNS) in the cell. When the plant fails to counteract.  The metabolic imbalance leading to the overproduced reactive species, it activates PCD.  Several plant hormones are also involved in the induction of both dPCD and ePCD: salicylic acid is required in HR cell death, ethylene in aerenchyma formation and tissue senescence, gibberellin in endosperm/aleurone development.  PCD PHASES IN PLANTS Daneva etal.,2016 4/6/2022 34 PROGRAMMED CELL DEATH
  • 35. • Plant proteases: Metacaspases Type 1: Metacaspases (AtMC1,AtMC2) Type 2: Metacaspases (AtMC4,AtMC 9) • Subtilisin- like serine proteases, VPE (vacuolar processing enzyme) family of proteases. • Bcl-2 associated athanogene (BAG) family: It is an evolutionary conserved family of co-chaperons in plants and animals distinguished by a characteristics BAG domain that mediates direct interaction with HSP70. • Hypersensitive mediated PCD: Rapid localised plant cell death upon contact with avirulent pathogens. • Necrotrophic pathogen mediated cell death: Death of cell caused by hydrolytic enzymes and host selective toxins. Vartapetian etal.,2011 4/6/2022 35 PROGRAMMED CELL DEATH
  • 36. • Proteolytic enzymes that are involved in PCD are localized in different compartments of plant cells: • Cytoplasm (metacaspases) • Vacuoles (VPE) • Intercellular fluid (phytaspases). Vartapetian etal.,2011 4/6/2022 36 PROGRAMMED CELL DEATH
  • 37. Jones etal., 2001 Azwali etal.,2019 4/6/2022 37 PROGRAMMED CELL DEATH
  • 38. PCD FEATURES ANIMALS PLANTS Cell shrinkage Yes Yes Chromatin condensation Yes Yes Phosphotidylserine externalization Yes Yes DNA laddering Yes Yes TUNELS-DNA cleavage Yes Yes Caspases Yes No Mitochondria permabilization Yes Yes Mitochondria depolarization Yes Yes Cytochrome c release Yes Yes Cytochrome c–dependent activation of cell death Yes No Apoptotic bodies Yes Yes Vacuole leakage and fusion with plasmalemma No Yes Cell shrinkage Yes Yes 4/6/2022 38 PROGRAMMED CELL DEATH
  • 39. REPRODUCTIVE STAGE  Gametophyte development.  Megaspore cell death  Cell death of the nucellar tissue  Antipodal cell death  Tapetum cell death  Cell death in sex determination  Self-incompatibility-induced cell death. VEGETATIVE STAGE  Xylogenesis  Lateral Root Cap Differentiation  Aerenchyma Formation  Leaf Morphogenesis  Organ Abscission and Dehiscence  Leaf Senescence  Floral Organ Senescence Pennel etal.,1997 4/6/2022 39 PROGRAMMED CELL DEATH
  • 40. PCD IN REPRODUCTIVE DEVELOPMENT IN PLANTS Megaspore cell death Cell death of the nucellar tissue Tapetum cell death. • The selection of the functional megaspore is position- dependentand varies between species. • The deletion of the functional megaspores is important for optimal seed development. • In Arabidopsis (Arabidopsis thaliana), the arabinogalactan protein AGP18is expressed during meiosis in the abaxial pole of the ovule. • Callose deposition. GAMETOPHYTE DEVELOPMENT Daneva etal., 2016 4/6/2022 40 PROGRAMMED CELL DEATH
  • 41. Cell death of the nucellar tissue • In the degenerating nucellar tissue of castor bean (Ricinus communis L.), proteomic analyses identified multiple proteases and protease inhibitors (Nogueira et al. 2012). • Nuclear condensation and DNA fragmentation indicative of PCD have been observed in the nucellus of wheat (Triticum aestivum L.) Tapetum cell death. • Precise timing of tapetum degeneration is crucial for pollen maturation. • The phytohormone gibberellic acid (GA) regulates tapetum differentiation and dPCD through GA-regulated myeloblastosis (GAMYB) TFs in rice and their homologues MYB33 and MYB65 in Arabidopsis. Kurusu etal.,2017 GAMETOPHYTE DEVELOPMENT 4/6/2022 41 PROGRAMMED CELL DEATH
  • 42. Maize produces separate unisexual flowers through programed abortion of preformed organ primordia. In the male inflorescence (tassel), stamen primordia develop to sexual maturity, while gynoecia (pistil primordia) are aborted. • TS2 encodes a dehydrogenase/reductase domain–containing, NAD(P)- binding Rossmann-fold protein. Shortly before abortion of the gynoecium, TS2 mRNA is expressed subepidermally in that primordium and thus gynoecium is aborted through PCD. • In tasselseed2 (Ts2) mutant plants, floral structures in the tassel adopt a female developmental program. • Dependent on the lipoxygenase-encodingTS1 gene, TS2 mRNA accumulates in all pistils, but in the female inflorescence pistils survive protected from PCD by the action of the SILKLESS1 gene. 4/6/2022 42 PROGRAMMED CELL DEATH
  • 43. Self-incompatibility-induced cell death Transmitting tract cell death. Synergid cell death and pollen tube rupture PCD IN FERTILIZATION Daneva etal., 2016 4/6/2022 43 PROGRAMMED CELL DEATH
  • 44. PCD IN FERTILIZATION Self-incompatibility-induced cell death Transmitting tract cell death. Synergid cell death and pollen tube rupture • SI in poppy (Papaver rhoeas) is controlled by a small, secreted stigma protein, PrsS, and a pollen membrane protein, PrpS, the interaction of which induces a calcium-triggered signaling network that leads to growth arrest and PCD of the incompatible PTs. (Eaves et al., 2014). • Actin depolymerization, ROS signaling, caspase-like protease activities and DNA fragmentation. • A drop of cytoplasmic pH in incompatible pollen. • The poppy SI system was successfully transferred to the self- compatible A. thaliana, suggesting that PrsS and PrpS factors can signal to a conserved PCD network in A. thaliana pollen. ( Lin et al., 2015). 4/6/2022 44 PROGRAMMED CELL DEATH
  • 45. Self-incompatibility-induced cell death Transmitting tract cell death. Synergid cell death and pollen tube rupture Transmitting tract cell death. • The transmitting tract (TT) is a specialized tissue that guides and supports PT growth toward the ovule. • In A. thaliana, TT cell death starts before anthesis and can be accelerated by pollination. • It has been proposed that pollination-induced TT PCD is activated by ethylene signaling and mRNA poly(A) tail shortening. (Crawford et al., 2007) PCD IN FERTILIZATION 4/6/2022 45 PROGRAMMED CELL DEATH
  • 46. Self-incompatibility-induced cell death Transmitting tract cell death. Synergid cell death and pollen tube rupture PCD IN FERTILIZATION Synergid cell death and pollen tube rupture • The Rsyn undergoes cell death upon arrival of the PT. The subsequent rupture of the PT, releasing two sperm cells into the female gametophyte, represents a second controlled cell death event during PT and Rsyn interaction. • In A. thaliana, Rsyn cell death is thought to be elicited by short-range signaling between PTs and Rsyn. • In the female gametophyte mutant gametophytic factor 2 (gfa2), ovules remain unfertilized because PT penetration and Rsyn cell death do not occur. (Leydon et al., 2015) 4/6/2022 46 PROGRAMMED CELL DEATH
  • 47. PCD IN SEED DEVELOPMENT  In the large suspensor of the runner bean (Phaseolus coccineus), tissue degeneration in the suspensor is marked by DNA fragmentation, by activation of caspase-like proteases, and by cytochrome c release from mitochondria. Embryonic suspensor cell death Endosperm cell death Seed coat cell death Aleurone PCD  In many species, the embryo-surrounding region (ESR) breaks down during mid-seed development to provide space for the growing embryo. In cereals, the starchy endosperm (SE) undergoes a PCD after seed filling.  Integument PCD is by cysteine protease which is specifically expressed in two integument layers.  In the innermost integument layer, PCD is characterized by vacuolar collapse and nuclear fragmentation and is regulated by PROTEIN DISULFIDE ISOMERASE 5 (PDI5).  Cereal aleurone PCD is controlled by phytohormones: the PCD-promoting GA and the antagonistically acting ABA. Downstream of GA and ABA, a number of TFs, proteases, nucleases, and vesicular trafficking regulators have been implicated in aleurone PCD Daneva etal., 2016 4/6/2022 47 PROGRAMMED CELL DEATH
  • 48. PCD IN VEGETATIVE DEVELOPMENT Xylogenesis and Root cap differentiation Aerenchyma formation Leaf Morphogenesis Daneva etal., 20164/6/2022 48 PROGRAMMED CELL DEATH
  • 49.  PCD of xylem tracheids and tracheary elements (TEs) culminates in protoplast clearance, producing interconnected hollow cell corpses with reinforced cell walls.  TE differentiation encompasses the subsequent phases of secondary cell wall (SCW) deposition, PCD, protoplast autolysis, and SCW lignification.  Various hormones, including brassinosteroids and ethylene, initiate TE differentiation and dPCD.  The root cap consists of a central columella and a peripheral lateral root cap (LRC).  The constant size and location of the LRC at the growing root tip are maintained by rapid cellular turnover.  The continuous generation of new LRC layers by specific stem cells is counterbalanced by tightly controlled dPCD that eliminates cells at the root cap edge LATERAL ROOT CAP DIFFERENTIATION Daneva etal., 2016 4/6/2022 49 PROGRAMMED CELL DEATH
  • 50. AERENCHYMA FORMATION  The formation of lysigenous aerenchyma mediated by PCD occurs constitutively in wetland species and can be induced by oxygen deprivation in waterlogged plants. • Hypoxia (Oxygen deprivation) • Cell death can occur in the cortex of the root and stem base in response to water logging and hypoxia. • It leads to ROS (H2O2, ethylene). • Ethylene triggers apoptotic pathway- eliminate some cells- aerenchyma. • The internal air spaces generated by cell death facilitate more efficient transfer of oxygen from aerial organs to waterlogged stem base and roots. Daneva etal., 2016 4/6/2022 50 PROGRAMMED CELL DEATH
  • 51. LEAF MORPHOGENESIS  Perforation PCD occurs between the leaf veins, creating the fenestrate pattern of mature lace plant leaves. Tonoplast rupture is the first evident PCD feature to occur, followed by DNA fragmentation, changes in nuclear morphology, cytoplasmic shrinkage, and organelle dismantling.  Ethylene Response Sensor 1 (ERS1)-mediated ethylene sensitivity.  Downstream of ethylene, caspase-1-like activities triggered by the release of a mitochondrial signal have been detected. (Rantong et al., 2015). Leaf morphogenesis in monstera plant 4/6/2022 51 PROGRAMMED CELL DEATH
  • 52. PCD IN LACE PLANT Aponogeton madagascariensis which is known as the Madagascar Lace Plant , decorative aquatic plant – skeleton like appearance • PCD process starts in young leaves between leaf veins • Alterations in the actin cytoskeleton • Chloroplast accumulation around the nucleus • Organelles are taken up into the vacuole in membrane bound vesicles - autophagy – Loss of mitochondrial membrane potential – DNAfragmentation, – Activation of caspase-like proteases – Before vacuolar collapse, plasma membrane rupture and cell wall degradation occurs • Perforation PCD occurs between the leaf veins, creating the fenestrate pattern of mature lace plant leaves. 4/6/2022 52 PROGRAMMED CELL DEATH
  • 53. PCD AS THE END POINT OF SENESCENCE Plant senescence controls nutrient remobilization during stress or age induced degeneration of tissues, organs, or entire organisms, concluding the life cycle of plant species. Leaf senescence Floral organ senescence 4/6/2022 53 PROGRAMMED CELL DEATH
  • 54. LEAF SENESCENCE  Ethylene promotes senescence  ETHYLENE-INSENSITIVE2 (EIN2) activates EIN3 expression  EIN3 upregulates the NAC TF ORESARA1/ANAC092 (ORE1) and other TFs and concurrently represses miR164.  ORE1 activates the expression of senescence-promoting TFs  ORE1 inhibits the activity of the chloroplast-supporting TFs GOLDEN-LIKE1 (GLK1) and GLK2.  Promotes the expression of dPCD-associated genes such as BFN1.  BFN1 localization has been associated with DNA degradation in aging leaf protoplasts Leaf senescence Leaf senescence and dPCD are linked by the trifurcate pathway downstream of ethylene Kim et al., 2014 4/6/2022 54 PROGRAMMED CELL DEATH
  • 55. FLORAL ORGAN SENESCENCE  In rose flowers, miR164 expression decreased with age and upon ethylene treatment, suggesting that the trifurcate ethylene pathway is also functional in floral organ senescence.  The A. thaliana MADS-box TF FOREVER YOUNG FLOWER (FYF) negatively regulates the expression of several senescence- promoting ethylene response DNA-binding factors (EDFs) in both pollinated and senescing flowers.  Plants with constitutive expression of EDF manifest significant upregulation of senescence-associated genes, PCD associated VPEs, and metacaspase genes. Floral organ senescence and dPCD are also linked by the trifurcate pathway downstream of ethylene Floral organ senescence Pei et al., 2013 4/6/2022 55 PROGRAMMED CELL DEATH
  • 56. OVERVIEW OF MOLECULAR REGULATORS DIRECTLY OR INDIRECTLY INVOLVED IN PLANT DPCD Hautegem etal., 2015 4/6/2022 56 PROGRAMMED CELL DEATH
  • 57.  It is commonly known that animal pathogens often target and suppress programmed cell death (PCD) pathway components to manipulate their hosts.  In contrast, plant pathogens often trigger PCD. In cases in which plant PCD accompanies disease resistance, an event called the hypersensitive response.  HR cell death is an active process in which the accumulation of 02 - and H202 leads to an elevation in cytosolic Ca2+ and triggers a protein kinase-mediated cell death process that is similar physiologically to PCD. 4/6/2022 57 PROGRAMMED CELL DEATH
  • 58. Taiz and Zeiger, 1991 4/6/2022 58 PROGRAMMED CELL DEATH
  • 59.  The first line of defense in both plants and animals is provided by pattern recognition receptors (PRRs)  They recognize microbe or danger associated molecular patterns (MAMPs and DAMPs, respectively).  Trigger immune signaling. Representation of Programmed cell death in the plant immune system Coll et al., 2011 4/6/2022 59 PROGRAMMED CELL DEATH
  • 60.  The morphology of cells undergoing the HR at late stages suggest that it is a form of PCD with some apoptotic features.  Membrane dysfunction (loss of ability to be plasmolysed) and progressive vacuolization of the cytoplasm.  There was a gap in the time course in which these events may have occurred. Thus, the HR in this system has a subset of apoptotic features.  Apoptosis-related events such as mitochondrial swelling, chromatin condensation and endonucleolytic cleavage occur before general organelle dysfunction. 4/6/2022 60 PROGRAMMED CELL DEATH
  • 61.  This would be expected if the HR occurs by an apoptotic-like mechanism.  In particular, apoptotic like bodies with avirulent Pseudomonas syringae infections were observed. (Levine et al., 1996).  It was found early changes in mitochondrial morphology (swelling and cristae disorganization) in avirulent P. syringae- infected lettuce, similar to what occurs in animal cells undergoing apoptosis. (Wakabaashi et al., 2001). 4/6/2022 61 PROGRAMMED CELL DEATH
  • 62. AIM :  To provide evidence for involvement of chloroplast as alternate organelle for initiating PCD in plants under light and abiotic stress. 4/6/2022 62 PROGRAMMED CELL DEATH
  • 63.  Materials and methods:  Plant material and growth conditions: Pusa basmati-1 which has been certified as salt sensitive cultivar. Seeds were soaked were incubated in dark another 3 days for germination. 1. 30 °C and light period 16 h and 8h dark 2. Kept in dark at same temperature  Isolation of protoplasts and salt treatment Protoplasts were isolated from the leaves of green and etiolated rice seedlings grown for 7d on respective growth conditions. Isolated protoplasts were subjected to 150 mM NaCl for different time points. 4/6/2022 63 PROGRAMMED CELL DEATH
  • 64. Fig 1: Evans blue staining of the protoplasts to count viability Protoplast isolated from seddlings in light (A,B) Protoplast isolated from etiolated seedlings (C,D) Salt stress induces cell death in protoplasts isolated from green and etiolated rice seedlings 4/6/2022 64 PROGRAMMED CELL DEATH
  • 65. Fig 2: Light and protease dependency of salt induced cell death Salt stress induced cell death is light dependent and Cystein protease mediated 4/6/2022 65 PROGRAMMED CELL DEATH
  • 66. SALINITY-INDUCED CELL DEATH IS MEDIATED BY CELLULAR ROS  Results demonstrate that untreated protoplasts isolated from green leaves generated H2O2 that was almost double of that generated from cells prepared from etiolated leaves. Fig 3: ROS generation during salt induced cell death. 4/6/2022 66 PROGRAMMED CELL DEATH
  • 67. SALT STRESS-INDUCED CELL DEATH IS APOPTOSIS LIKE CELL DEATH (AL-PCD) Fig 4: Identification of cell membrane blebbing and nuclear loabing during salt stress. A) Green protoplasts untreated B) 2h salt treated green protoplasts. C) 4h salt treated green protoplasts. D) 6h salt treated green protoplasts. A) bright field image B) Acridine orange C) ethidium bromide staining D) merge of b and c 4/6/2022 67 PROGRAMMED CELL DEATH
  • 68. EVIDENCE FROM ULTRA-STRUCTURE STUDIES CHLOROPLASTS ARE PREFERRED TARGET DURING SALT STRESS INDUCED PCD Fig 5: Ultra structural changes in chloroplast and mitochondria during salt induced cell death.  As this study attempt has been made to understand the mechanism of salt-stress- induced PCD and involvement of chloroplasts in the execution of the termination event.  The results clearly demonstrate that in salt-treated etiolated and green protoplasts, cell death is accentuated by light. Thus, suggesting the involvement of etio chloroplasts and chloroplasts in cell death that is modulated by light. 4/6/2022 68 PROGRAMMED CELL DEATH
  • 69. AIM :  To investigate the role of CEP1 in anther development and to identify whether it is the crucial executor during tapetal PCD which is necessary for timely degeneration of tapetal cells and functional pollen formation. Papain-like cysteine proteases, CEP1, CEP2, and CEP3, are expressed in Arabidopsis roots, flowers, and green siliques where the cells are about to collapse. 4/6/2022 69 PROGRAMMED CELL DEATH
  • 70.  Materials and methods:  Plant material and growth conditions:  Arabidopsis thaliana accession Columbia-0  Arabidopsis thaliana (Wild, Control)  Plants were grown on a soil mixture (3:1:1 mixture of peat moss-enriched soil: vermiculite: perlite) with a 14-h-light/10-h-dark photoperiod at 23°C. 4/6/2022 70 PROGRAMMED CELL DEATH
  • 71. Identification of the cep1 Mutant Fig 1: image representing SALK_094934 and SALK_013036 T-DNA insertion positions in At5g50260. Filled boxes represent exons. Fig 2. Comparison of the Wild Type and the cep1 Mutant 4/6/2022 71 PROGRAMMED CELL DEATH
  • 72. EXPRESSION CHARACTERIZATION OF CEP1 IN ARABIDOPSIS Fig 3. CEP1 spatial and temporal expression analyses by RT-PCR. fl-flower; le-leaf; ro-root and st-stem. 4/6/2022 72 PROGRAMMED CELL DEATH
  • 73. ANTHER DEVELOPMENT IN THE CEP1 MUTANT  Figure 4. Transverse Section Comparison of Anther Development in the Wild Type and cep1 Mutant Anther maturation was abnormal in the cep1 mutant, particularly tapetal degeneration and pollen development. 4/6/2022 73 PROGRAMMED CELL DEATH
  • 74. Figure 5. Transmission Electron Micrographs of Microspores from the Wild Type and cep1 Mutant In cep1 mutant, pollen development was impaired, resulting in defective pollen exine, abnormal pollen shape, and collapsed pollen grains. Thus CEP1 is important for proper pollen development. 4/6/2022 74 PROGRAMMED CELL DEATH
  • 75.  Tapetal programmed cell death (PCD) is a prerequisite for pollen grain development in angiosperms, and cysteine proteases are the most ubiquitous hydrolases involved in plant PCD.  CEP1 is expressed specifically in the tapetum from stages 5 to 11 of anther development.  As they characterized the phenotype of the cep1 mutant, CEP1 expression in Arabidopsis, enzymatic characteristics of CEP1 in vitro, between the wild type and cep1 mutant showed there is a normal pollen development in the wild than the mutant .  Results indicate that CEP1 acts as an irreplaceable executor during tapetal cell PCD, which regulates pollen development. 4/6/2022 75 PROGRAMMED CELL DEATH
  • 76. THE BUCKET LIST: THINGS TO DO BEFORE YOU DIE 4/6/2022 76 PROGRAMMED CELL DEATH
  • 77. PCD is like a SOLDIERS who can sacrifice their LIFE for others GROWTH and DEVELOPMENT.., 4/6/2022 77 PROGRAMMED CELL DEATH

Editor's Notes

  1. Blebs are protrusions of the cell membrane. They are the result of actomyosin contractions of the cortex, which cause either transient detachment of the cell membrane.
  2. Fas ligand (FasL or CD95L or CD178) is a type-II transmembrane protein that belongs to the tumor necrosis factor (TNF) family. Its binding with its receptor induces apoptosis
  3. Caspases like protease will be present
  4. the presence of an abnormally large number of myeloblasts in the tissues, organs, MYELOBLASTS. The myeloblast is a unipotent stem cell which differentiates into the effectors of the granulocyte series
  5. Actin filament depolymerization ensures the turnover of actin filaments within these structures and maintains a pool of actin monomers that permits the continual restructuring and growth of the actin cytoskeleton.
  6. The poly-A tail is a long chain of adenine nucleotides that is added to a messenger RNA (mRNA) molecule during RNA processing to increase the stability of the molecule
  7. One type of short-distance signaling is also known as paracrine signaling, which is when signal molecules only diffuse through a short extracellular space before they reach the target cell
  8. MicroRNA164 (miR164) plays a key role in leaf and flower development, lateral root initiation, and stress responses
  9. MicroRNA164 (miR164) plays a key role in leaf and flower development, lateral root initiation, and stress responses
  10. 4-(2-Aminoethyl) benzenesulfonyl fluoride hydrochloride (AEBSF) –PROTEASE INHIBITOR, CASPASE 3 INHIBITOR
  11. Blebs are protrusions of the cell membrane. They are the result of actomyosin contractions of the cortex, which cause either transient detachment of the cell membrane.
  12. Siquies is a type of fruit with two fused carpels
  13. In both lines, plants displayed reduced male fertility, and normal female development was confirmed by reciprocal cross analysis. Defective cep1 mutants were crossed with the wild type, and all F1 progeny were fertile with an approximate 3:1 phenotypic segregation ratio in F2 plants (fertility: sterility = 208: 81; x2 =1.256; P < 0.05), suggesting that this mutation is controlled by a single recessive locus. Wild-type mature pollen grains were blue-black upon staining with iodium-potassium iodide solution (Figure 1D), whereas cep1 pollen grains were brown (Figure 1E). wild-type mature pollen grains were uniformly spheroid and had finely reticulate ornamentation on their surface (Figures 1F, 1H, and 1J), whereas surviving pollen grains in the cep1 mutant adhered to one another, formed irregular clumps, and exhibited collapsed and gemmate-baculate sculpture without regularly reticulate ornamentation (Figures 1G, 1I, and 1K). These results show that the absence of CEP1 markedly impaired pollen development and resulted in sterile pollen grains with abnormal pollen morphology.
  14. Here tds-tetrads and c is callose