LUNULARIA -features, morphology, anatomy ,reproduction etc.
Ā
BIS2C: Lecture 24: Opisthokonts
1. Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Lecture 24:
Introduction to Opisthokonts
BIS 002C
Biodiversity & the Tree of Life
Spring 2016
Prof. Jonathan Eisen
1
2. Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Where we are going and where we have beenā¦
2
ā¢Previous lecture:
ā¢23: Botanical Conservatory
ā¢Current Lecture:
ā¢24: Intro to Opisthokonts
ā¢Next Lecture:
ā¢25: Sponges
3. Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Key Topics
ā¢ Opisthokonts - major groups
ā¢ Shared traits of opisthokonts
ā¢ Derived traits of major opisthokont groups
ā¢ Evolution of multicellularity
ā¢ Choanoflagellates and their relevance to
animals
3
4. Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016 44
Eukaryote Diversity
5. Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016 55
Opisthokonts
7. It is ALWAYS more complicated ā¦
!7Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Opisthokonts
Fungi
Animals
Choanoflagellates
Ichthyosporea
9. It is ALWAYS more complicated ā¦
!9Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Opisthokonts
Fungi
Animals
Choanoflagellates
Filasterea
Ichthyosporea
14. Opisthokonts
!14Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Opisthokonts
Fungi
Animals
Choanoflagellates
Shared derived traits of clade?
15. Opisthokonts
!15Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Opisthokonts
Fungi
Animals
Choanoflagellates
Flagellum, if presence, single
and posterior,
Greek:
opĆsthios =
"rear" +
(kontĆ³s) =
"pole"
16. Opisthokonts
!16Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Opisthokonts
Fungi
Animals
Choanoflagellates
Multiple other features
Greek:
opĆsthios =
"rear" +
(kontĆ³s) =
"pole"
17. Opisthokonts
!17Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Opisthokonts
Fungi
Animals
Choanoflagellates
Why care about these?
18. Anti fungal drugs
!18Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
http://www.slideshare.net/drjankiborkar/antifungals-14155209
19. !19Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
The development of antifungal agents has lagged
behind that of antibacterial agents. This is a predictable
consequence of the cellular structure of the organisms
involved. Bacteria are prokaryotic and hence offer
numerous structural and metabolic targets that differ
from those of the human host. Fungi, in contrast, are
eukaryotes, and consequently most agents toxic to
fungi are also toxic to the host.
http://www.ncbi.nlm.nih.gov/books/NBK8263/
27. Clicker
Which of the following best describes a heterotroph?
A. Gets carbon from organic compounds
B. Gets electrons from organic compounds
C. Gets energy from organic compounds
D. Gets carbon and electrons from organic compounds
E. All of the above
!27Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
28. Clicker
Which of the following best describes a heterotroph?
A. Gets carbon from organic compounds
B. Gets electrons from organic compounds
C. Gets energy from organic compounds
D. Gets carbon and electrons from organic compounds
E. All of the above
!28Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
29. Component Different Forms
Energy source Light
Photo
Chemical
Chemo
Electron source
(reducing
equivalent)
Inorganic
Litho
Organic
Organo
Carbon source Carbon from C1
compounds
Auto
Carbon from
organics
Hetero
Forms of nutrition (trophy)
ā¢ Three main components to ātrophyā
Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
30. Opisthokonts
!30Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Opisthokonts
Fungi
Animals
Choanoflagellates
Absorptive heterotrophy
31. Photo 30.3 Hardwood log being ārecycledā by saprobic brown rot fungi; central Illinois.
!31Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
32. Opisthokonts
!32Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Opisthokonts
Fungi
Animals
Choanoflagellates
Absorptive heterotrophy;
Chitin in cell walls
34. Figure 30.10 A Phylogeny of the Fungi
!34Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Microsporidia
Chytrids
Zygosporefungi
(Zygomycota)
Arbuscularmycorrhizalfungi
(Glomeromycota)
Sacfungi
(Ascomycota)
Clubfungi
(Basidiomycota)
Dikarya
36. Animal Shared Derived Traits
!36Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Opisthokonts
Fungi
Animals
Choanoflagellates
ā¢ Internal digestion
ā¢ Muscle & movement
ā¢ Extracellular matrix
molecules such as
collagen
ā¢ Unique cell junctions
ā¢ Multicellularity
37. Animal Shared Derived Traits
!37Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Opisthokonts
Fungi
Animals
Choanoflagellates
ā¢ Internal digestion
ā¢ Muscle & movement
ā¢ Extracellular matrix
molecules such as
collagen
ā¢ Unique cell junctions
ā¢ Multicellularity
ā¢ More on this starting
Friday
38. Opisthokonts
!38Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Opisthokonts
Fungi
Animals
Choanoflagellates
Choanoflagellate
& Animal Derived Traits
39. Opisthokonts
!39Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Opisthokonts
Fungi
Animals
Choanoflagellates
Why Care About These?
40. Opisthokonts
!40Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Opisthokonts
Fungi
Animals
Choanoflagellates
Multicellularity Origins?
41. Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Multicellularity vs. Colonial Aggregates
ā¢ Multicellular: having many cells of the
same genotype, in which there is some
level of morphological differentiation and
division of labour among cell types
ā¢ Colonial: aggregates of morphologically
identical cells of the same genotype
ā¢ There is a continuum of loosely integrated
colonies to fully integrated multicellular
organisms.
41
42. Opisthokonts
!42Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Opisthokonts
Fungi
Animals
Choanoflagellates
Multicellularity Origins?
M
M
43. Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016 4343
Opisthokont Multicellularity
44. Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016 4444
Opisthokont Multicellularity
45. Figure 28.3 Red Algae
!45Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
46. Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016 4646
Red Algal Multicellularity
61. Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Clicker
ā¢ The multiple origins of multicellularity is a
form of
ā¢ A. Homology
ā¢ B. Heteroplasy
ā¢ C. Synapomorphy
ā¢ D. Homoplasy
ā¢ E. Homospory
61
62. Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Clicker
ā¢ The multiple origins of multicellularity is a
form of
ā¢ A. Homology
ā¢ B. Heteroplasy
ā¢ C. Synapomorphy
ā¢ D. Homoplasy
ā¢ E. Homospory
62
63. Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
History has often repeated itself:
Multicellular organisms independently
originated at least 25 times from unicellular
ancestors
63
64. Animal Multicellularity
!64Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Opisthokonts
Fungi
Animals
Choanoflagellates
Key Point in Studying Animal
Multicellularity & Biology
M
66. Choanoflagellates
!66Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Opisthokonts
Fungi
Animals
Choanoflagellates
M
From
Greek KhoanÄ
= āfunnel" (i.e
collar)
And Latin
āļ¬agellum" (i.e.
, the ļ¬agella)
70. Figure 31.2 Choanocytes in Sponges Resemble Choanoflagellate Protists (Part 1)
!70Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Choanoflagellate protists
Stalk
Flagellum
Single cell
71. S. rosetta capture and phagocytosis
!71Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
DIC timelapse movie
of S. rosetta thecate
cell showing capture
and phagocytosis of
bacteria.
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0095577
72. S. rosetta capture and phagocytosis
!71Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
DIC timelapse movie
of S. rosetta thecate
cell showing capture
and phagocytosis of
bacteria.
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0095577
73. !72Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Timelapse movie of S. rosetta thecate cell showing egestion of material, transported from the food vacuole to the inside
base of the collar, exiting the cell between the collar and flagellum, and carried away by the current.
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0095577
S. rosetta egestion
74. !72Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Timelapse movie of S. rosetta thecate cell showing egestion of material, transported from the food vacuole to the inside
base of the collar, exiting the cell between the collar and flagellum, and carried away by the current.
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0095577
S. rosetta egestion
75. !73Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0095577
Phase microscopy timelapse movie showing the arrival of an S. rosetta thecate cell and subsequent accumulation of
bacteria on coverslip surface in the region surrounding the cell.
S. rosetta collecting food ā¦
76. !73Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0095577
Phase microscopy timelapse movie showing the arrival of an S. rosetta thecate cell and subsequent accumulation of
bacteria on coverslip surface in the region surrounding the cell.
S. rosetta collecting food ā¦
77. Sponges
!74Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Sponges
Bilaterians
(protostomes and
deuterostomes)
Ctenophores
Cnidarians
Placozoans
78. Figure 31.15 Sponge Diversity
!75Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Euplectella
aspergillum
Xestospongia
testudinaria
Spicules
Sycon sp.
79. Figure 31.2 Choanocytes in Sponges
!76Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Choanocyte
Pore
Osculum
Water out
via osculum
Atrium
Spicule
Water and
food particles
in via pores
Spicules
Flagellum
80. !77
Figure 31.2 Choanocytes in Sponges Resemble Choanoflagellate Protists
Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
81. !78Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
http://www.nytimes.com/2010/12/14/science/14creatures.html?_r=0
82. Animal Multicellularity
!79Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Opisthokonts
Fungi
Animals
Choanoflagellates
Colonial
M
Flagellum
Collar
83. Choanoflagellate aggregation
!80Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Nicole King, Professor, UC Berkeley
HHMI Professor
MacArthur āGeniusā Prize Winner
84. Many morphologies in cultures
!81Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Fig. 1.
Five distinct cell morphologies observed in S. rosetta cultures. (A) Cells in rosette colonies orient in a sphere around a central focus, with their apical flagella
and collars oriented radially outward. (B) Cells in chain colonies attach to one another laterally to form linear arrays of cells. (C,D) Thecate cells have long
(~ 4 Āµm) collars surrounding apical flagella and attach to substrates via a goblet-shaped theca. (E,F) Slow swimmers have similar morphology to thecate cells,
but lack thecae. (G,H) Fast swimmers have no theca and either no collar or a truncated collar (arrowheads), and are often covered in small filopodia . Key: f:
flagellum, C: collar, T: theca, S: skirt, Fp: filopodia, B: bacteria. Scale bars = 5 Āµm. (A,B,C,E,G: DIC microscopy, D,F,H: Scanning Electron Microscopy).
85. Life history of a model Choanoflagellate Salpingoeca rosetta
!82Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
http://www.sciencedirect.com/science/article/pii/S0012160611009924
86. Life history of a model Choanoflagellate Salpingoeca rosetta
!83Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
http://www.sciencedirect.com/science/article/pii/S0012160611009924
87. !84Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Timelapse microscopy of a fast swimmer
building a new theca. Although fast
swimmers normally attach to environmental
substrates, an unusual case of attachment
to an empty theca is presented here
because the added elevation from the
substrate affords a better view of the
attachment process. A fast swimmer uses
long filopodia to attach to an empty theca.
Those filopodia in contact with the empty
theca become more refractile and coalesce
to form the base of a new stalk projecting
from the base of the cell. The coalesced
filopodia form a highly refractile stalk which
extends from the cell base. The refractile
material is replaced by a stable stalk, after
which the cell becomes more spherical and
secretes the theca cup from its sides,
leaving a ~ 1 Āµm gap between the theca
and cell base.
doi:10.1016/j.ydbio.2011.06.003
88. !84Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Timelapse microscopy of a fast swimmer
building a new theca. Although fast
swimmers normally attach to environmental
substrates, an unusual case of attachment
to an empty theca is presented here
because the added elevation from the
substrate affords a better view of the
attachment process. A fast swimmer uses
long filopodia to attach to an empty theca.
Those filopodia in contact with the empty
theca become more refractile and coalesce
to form the base of a new stalk projecting
from the base of the cell. The coalesced
filopodia form a highly refractile stalk which
extends from the cell base. The refractile
material is replaced by a stable stalk, after
which the cell becomes more spherical and
secretes the theca cup from its sides,
leaving a ~ 1 Āµm gap between the theca
and cell base.
doi:10.1016/j.ydbio.2011.06.003
89. !85Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Top view of two fast swimmers attaching to substrate. Cells attach via long
filopodia, and move several microns across substrates before building thecae.
90. !85Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Top view of two fast swimmers attaching to substrate. Cells attach via long
filopodia, and move several microns across substrates before building thecae.
91. Life history of a model Choanoflagellate Salpingoeca rosetta
!86Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
http://www.sciencedirect.com/science/article/pii/S0012160611009924
92. !87Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Timecourse of three cells releasing from their thecae. As cells begin to leave thecae, multiple
filopodia extend from sides of cell maintaining contact with edge of theca cup (clearest in middle cell
at 1:02:10ā1:30:00, and left cell at 1:01:30). Change in angle of filopodia as it releases from theca in
left cell (from 01:01:20 to 01:01:30) shows that these are filopodia and not retraction fibers. As cells
release, collar retracts (clearest in right cell at 0:12:30). Times shown in Hours:Minutes:Seconds
93. !87Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Timecourse of three cells releasing from their thecae. As cells begin to leave thecae, multiple
filopodia extend from sides of cell maintaining contact with edge of theca cup (clearest in middle cell
at 1:02:10ā1:30:00, and left cell at 1:01:30). Change in angle of filopodia as it releases from theca in
left cell (from 01:01:20 to 01:01:30) shows that these are filopodia and not retraction fibers. As cells
release, collar retracts (clearest in right cell at 0:12:30). Times shown in Hours:Minutes:Seconds
94. !88Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Thecate cell division showing that one daughter cell leaves while the other remains in the theca.
95. !88Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Thecate cell division showing that one daughter cell leaves while the other remains in the theca.
96. Life history of a model Choanoflagellate Salpingoeca rosetta
!89Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
http://www.sciencedirect.com/science/article/pii/S0012160611009924
97. !90Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Tilt series through an intercellular bridge shows that the cell membrane is continuous across the
bridge.
98. !90Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Tilt series through an intercellular bridge shows that the cell membrane is continuous across the
bridge.
99. !91Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016Rosette colony ejects minute cells that adhere to the coverslip.
100. !91Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016Rosette colony ejects minute cells that adhere to the coverslip.
101. !92Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
S. rosetta rosette colonies reproduce by fission
102. !92Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
S. rosetta rosette colonies reproduce by fission
103. Life history of a model Choanoflagellate Salpingoeca rosetta
!93Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
A model of S. rosetta life history. S. rosetta
cells can differentiate between at least five
different forms. Arrows depict observed and
inferred transitions that are described in the
main text and in Fig. S9. Fast swimmers can
settle to produce thecate cells that then
produce swimming cells either through cell
division or theca abandonment. Under rapid
growth conditions, slow swimmer cells
proliferate but remain attached via intercellular
bridges and ECM to produce chain colonies,
or, in the presence of A. machipongonensis
bacteria (denoted by āāā), rosette colonies that
have intercellular bridges, ECM and filopodia.
caption
http://www.sciencedirect.com/science/article/pii/S0012160611009924
106. Animal Multicellularity
!96Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Opisthokonts
Fungi
Animals
Choanoflagellates
ā¢ Colonial
ā¢ Single flagellum
ā¢ Collar
ā¢ Cell adhesion
M
109. !99Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
http://www.ibiology.org/ibioseminars/nicole-king-part-1.html
http://www.ibiology.org/ibioseminars/nicole-king-part-2.html
110. Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Single cell -> aggregation -> multicellular
100
111. It is ALWAYS more complicated ā¦
!101Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Opisthokonts
Fungi
Animals
Choanoflagellates
Filasterea
Ichthyosporea
119. Fungal Diversity
!106Slides by Jonathan Eisen for BIS2C at UC Davis Spring 2016
Microsporidia
Chytrids
Zygosporefungi
(Zygomycota)
Arbuscularmycorrhizalfungi
(Glomeromycota)
Sacfungi
(Ascomycota)
Clubfungi
(Basidiomycota)
Dikarya