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Gene Cloning
Solomn A.
What is Gene Cloning?
 DNA cloning is the process of making multiple, identical
copies of a particular piece of DNA.
 It is an insertion of DNA fragment to a vector molecule
and then transferring to the host cells( bacteria) .
BASIC STEPS OF GENE CLONING
 The basic steps are:
1. Cutting and pasting DNA and Vectors
2. Bacterial transformation and selection
3.Grow up lots of plasmid-carrying bacteria
and use them as "factories" to make the
protein. Harvest the protein from the bacteria
and purify it
Basic Requirements for Gene Cloning
 Cloning Vectors
 Isolation Procedure for DNA fragment and
Vectors
 Appropriate Enzyme for Purified DNA
manipulation
 Host Cells
 Agar with Antibiotics
Vectors for Gene Cloning: Plasmid and Bacteriophage
 Characteristic of a Vector for Gene cloning
 It must be able to replicate with in the host cells
 It needs to be small , Ideally less than 10 kb in size
 Two kind of DNA molecule that satisfy the above criteria can be
found in bacterial cells, namely Plasmid and Bacteriophage
chromosomes
Plasmid:Is a circular molecule of DNA that lead un independent
existence in the bacteria cells.
Bacteriophages, or phages are viruses that specifically
infect bacteria.
Plasmid Vectors
Representative plasmids
Bacteriophage
1. Purification of fragment DNA and vectors
 The procedure for total DNA preparation from a culture of
bacterial cells can be divided into four stages (Figure 3.1):
1) A culture of bacteria is grown and then harvested.
2) The cells are broken open to release their contents.
3) This cell extract is treated to remove all components
except the DNA.
4) The resulting DNA solution is concentrated.
Preparation of total cell DNA
The composition of two typical media for the growth of
bacterial cells
Harvesting by centrifugation
Preparation of cell extract
Approaches of DNA purification
Plasmid purification by the Alkaline denaturation method
Bacteriophage vector preparation
Collection of phage particles by PEG
2. Manipulation of purified DNA
 DNA manipulative enzymes can be grouped into
four broad classes, depending on thet ype of
reaction that they catalyse:
1. Nucleases are enzymes that cut, shorten, or
degrade nucleic acid molecules.
2. Ligases join nucleic acid molecules together.
3. Polymerases make copies of molecules.
4. Modifying enzymes remove or add chemical
groups.
Nuclease
 Nucleases degrade DNA molecules by breaking the phosphodiester
bonds that link one nucleotide to the next in a DNA strand.
 There are two different kinds of nuclease
1. Exonucleases remove nucleotides one at a time from the end of a
DNA molecule.
 Bal31
 Exonulease III
2. Endonucleases are able to break internal phosphodiester bonds
within a DNA molecule.
 S1 nuclease
 DNease
 Restriction Endonuclease
Exonuclease and endonuclease enzyme
Exonulease
Endonuclease
Ligase( DNA Ligase)
DNA Polymerases
DNA Modifying Enzyme
Cutting Plasmid vector molecule and Target gene
Cutting Phage vector molecule and Target gene
Construction of Recombinant DNA
4. Transformation: The uptake of DNA by bacterial cells
The product of ligation
Nutrient Agar
Preparation of Recombinant DNA
Gene cloning by using plasmid vector
Gene cloning by using bacteriophage
Uses of DNA cloning
 DNA molecules built through cloning techniques are
used for many purposes in molecular biology.
 A short list of examples includes:
 Biopharmaceuticals
 Gene therapy
 Gene analysis
END
Thank you

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Gene Cloning.ppt

  • 2. What is Gene Cloning?  DNA cloning is the process of making multiple, identical copies of a particular piece of DNA.  It is an insertion of DNA fragment to a vector molecule and then transferring to the host cells( bacteria) .
  • 3. BASIC STEPS OF GENE CLONING  The basic steps are: 1. Cutting and pasting DNA and Vectors 2. Bacterial transformation and selection 3.Grow up lots of plasmid-carrying bacteria and use them as "factories" to make the protein. Harvest the protein from the bacteria and purify it
  • 4. Basic Requirements for Gene Cloning  Cloning Vectors  Isolation Procedure for DNA fragment and Vectors  Appropriate Enzyme for Purified DNA manipulation  Host Cells  Agar with Antibiotics
  • 5. Vectors for Gene Cloning: Plasmid and Bacteriophage  Characteristic of a Vector for Gene cloning  It must be able to replicate with in the host cells  It needs to be small , Ideally less than 10 kb in size  Two kind of DNA molecule that satisfy the above criteria can be found in bacterial cells, namely Plasmid and Bacteriophage chromosomes Plasmid:Is a circular molecule of DNA that lead un independent existence in the bacteria cells. Bacteriophages, or phages are viruses that specifically infect bacteria.
  • 9. 1. Purification of fragment DNA and vectors  The procedure for total DNA preparation from a culture of bacterial cells can be divided into four stages (Figure 3.1): 1) A culture of bacteria is grown and then harvested. 2) The cells are broken open to release their contents. 3) This cell extract is treated to remove all components except the DNA. 4) The resulting DNA solution is concentrated.
  • 11. The composition of two typical media for the growth of bacterial cells
  • 14. Approaches of DNA purification
  • 15. Plasmid purification by the Alkaline denaturation method
  • 17. Collection of phage particles by PEG
  • 18. 2. Manipulation of purified DNA  DNA manipulative enzymes can be grouped into four broad classes, depending on thet ype of reaction that they catalyse: 1. Nucleases are enzymes that cut, shorten, or degrade nucleic acid molecules. 2. Ligases join nucleic acid molecules together. 3. Polymerases make copies of molecules. 4. Modifying enzymes remove or add chemical groups.
  • 19. Nuclease  Nucleases degrade DNA molecules by breaking the phosphodiester bonds that link one nucleotide to the next in a DNA strand.  There are two different kinds of nuclease 1. Exonucleases remove nucleotides one at a time from the end of a DNA molecule.  Bal31  Exonulease III 2. Endonucleases are able to break internal phosphodiester bonds within a DNA molecule.  S1 nuclease  DNease  Restriction Endonuclease
  • 21.
  • 27. Cutting Plasmid vector molecule and Target gene
  • 28. Cutting Phage vector molecule and Target gene
  • 30. 4. Transformation: The uptake of DNA by bacterial cells
  • 31. The product of ligation
  • 32.
  • 35. Gene cloning by using plasmid vector
  • 36. Gene cloning by using bacteriophage
  • 37. Uses of DNA cloning  DNA molecules built through cloning techniques are used for many purposes in molecular biology.  A short list of examples includes:  Biopharmaceuticals  Gene therapy  Gene analysis