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By
KAUSHAL KUMAR SAHU
Assistant Professor (Ad Hoc)
Department of Biotechnology
Govt. Digvijay Autonomous P. G. College
Raj-Nandgaon ( C. G. )
Synopsis
Definition
What constitute a chemical bond?
Types of bond
1. Strong bond
Covalent bond
 Glycosidic bond
 Peptide bond
 Disulfide bond
2. Weak bond
 Hydrogen bond
 Van der waals bond
 Hydrophobic bond
 Ionic bond
Conclusion
References
Definition
 A chemical bond is an attraction
between atoms that allows the
formation of chemical substances that
contain two or more atoms
What constituent
chemical bond?
 A bond is formed when electrons from
two atoms interact with each other
and their atoms become joined.
Types of bond
 Strong bond
covalent bond
covalent bond in biomolecules are
• Glycosidic bond
• Peptide bond
• disulphide bond
• PHOSPHODIESTER BOND
 Weak bond
• Hydrogen bonding
• Van der waals bonding
• Hydrophobic bond
• Ionic bond
Strong bond
Covalent Bond
 Between nonmetallic elements of
similar electronegativity.
 Formed by sharing electron pairs
 Examples; O2, CO2, C2H6, H2O,
2. Covalent bonds- Two atoms share one or more pairs of outer-shell
electrons.
Oxygen Atom Oxygen Atom
Oxygen Molecule (O2)
Glycosidic bond
A glycosidic bond is formed between
the hemiacetal group of a saccharide (or a
molecule derived from a saccharide) and
the hydroxyl group of some organic
compound such as an alcohol.
•The bond is formed
between monosaccharide
to form disaccharides
•Also seen in DNA where
nitrogenous bases form N-
glycosidic bond with sugar
molecule
Glycosidic bond in carbohydrates
Glycosidic bond in DNA
Peptide bond
 Amino acid are covalently linked by amide
bonds (–CO-NH-) (Peptide Bonds)
 The resulting molecules are called Peptides &
Proteins
 Polypeptides and proteins are chains
of amino acids held together by peptide
bonds
Disulfide bond
 A disulfide bond is a covalent bond, usually derived by the
coupling of two thiol groups. The linkage is also called an SS-
bond or disulfide bridge. The overall connectivity is
therefore R-S-S-R
 formed between the thiol groups of cysteine residues.
Phosphodiester bond
 A phosphodiester bond is a group of
strong covalent bonds between a phosphate
group and two 5-carbon
ring carbohydrates (pentoses) over
two ester bonds.
 In DNA and RNA, the phosphodiester bond is the
linkage between the 3' carbon atom of one sugar
molecule and the 5' carbon atom of another; the
sugar molecules being deoxyribose in DNA
and ribose in RNA.
Phosphodiester
bond
Weak bond
Hydrogen bond
 A hydrogen bond is the electromagnetic attractive
interaction of a hydrogen atom and
an electronegative atom, such as
nitrogen, oxygen or fluorine, that comes from
another molecule or chemical group
 Intramolecular hydrogen bonding is partly
responsible for the secondary, tertiary,
and quaternary structures of proteins and nucleic
acids
Hydrogen bonding in DNA
Hydrogen bonding in proteins
Van der waals bonds
 Van der waals force is the sum of the attractive or
repulsive forces between molecules (or between
parts of the same molecule) other than those due
to covalent bonds, the hydrogen bonds, or
the electrostatic interaction of ions with one
another or with neutral molecules
Hydrophobic bond
 Meaning “Water fearing”
 The hydrophobic effect is the observed tendency
of nonpolar substances to aggregate in aqueous
solution and exclude water molecules
IONIC BOND
Bond formed between
two ions by the
transfer of electrons
Formation of Ions from Metals
 Ionic compounds result when metals react
with nonmetals
 Metals lose electrons to match the number
of valence electrons of their nearest noble
gas
 Positive ions form when the number of
electrons are less than the number of
protons
Group 1 metals  ion 1+
Group 2 metals  ion 2+
Ionic Bond
 Between atoms of metals and nonmetals
with very different electronegativity
 Bond formed by transfer of electrons
 Examples; NaCl, CaCl2, K2O
 Ionic interactions- Some amino acids have
charged R groups, which attract oppositely
charged R groups and repel those with like
charges.
Ionic Bonds: One Big Greedy Thief Dog!
1). Ionic bond – electron from Na is transferred to Cl,
this causes a charge imbalance in each atom. The Na
becomes (Na+) and the Cl becomes (Cl-), charged
particles or ions.
Conclusion
 Believe it or not, the chemical properties of almost
any substance or material in the world depend
upon the chemical bonds that make it up.
 If it weren't for chemical bonds, every material in
the world would have to be one of the 118
elements in the Periodic Table. Instead, atoms from
these elements bond together to create chemical
compounds.
 There are chemical bonds between the atoms in
our bodies (especially the elements carbon,
hydrogen, and oxygen), the atoms in the air, and
the atoms in most plants and synthetic materials.
 In fact, chemical bonds are everywhere, and when
two elements bond together, their properties often
change completely.
References
 Nelson and cox – Principle of
biochemistry. 5th edition
 Voet D, Voet JG and Pratt CW –
Fundamentals of biochemistry. 2nd
edition
 www.tokresource.org
 www.labspace.open.ac.uk

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Types of Chemical Bonds in Biomolecules

  • 1. By KAUSHAL KUMAR SAHU Assistant Professor (Ad Hoc) Department of Biotechnology Govt. Digvijay Autonomous P. G. College Raj-Nandgaon ( C. G. )
  • 2. Synopsis Definition What constitute a chemical bond? Types of bond 1. Strong bond Covalent bond  Glycosidic bond  Peptide bond  Disulfide bond 2. Weak bond  Hydrogen bond  Van der waals bond  Hydrophobic bond  Ionic bond Conclusion References
  • 3. Definition  A chemical bond is an attraction between atoms that allows the formation of chemical substances that contain two or more atoms
  • 4. What constituent chemical bond?  A bond is formed when electrons from two atoms interact with each other and their atoms become joined.
  • 5. Types of bond  Strong bond covalent bond covalent bond in biomolecules are • Glycosidic bond • Peptide bond • disulphide bond • PHOSPHODIESTER BOND  Weak bond • Hydrogen bonding • Van der waals bonding • Hydrophobic bond • Ionic bond
  • 7. Covalent Bond  Between nonmetallic elements of similar electronegativity.  Formed by sharing electron pairs  Examples; O2, CO2, C2H6, H2O,
  • 8.
  • 9. 2. Covalent bonds- Two atoms share one or more pairs of outer-shell electrons. Oxygen Atom Oxygen Atom Oxygen Molecule (O2)
  • 10. Glycosidic bond A glycosidic bond is formed between the hemiacetal group of a saccharide (or a molecule derived from a saccharide) and the hydroxyl group of some organic compound such as an alcohol. •The bond is formed between monosaccharide to form disaccharides •Also seen in DNA where nitrogenous bases form N- glycosidic bond with sugar molecule Glycosidic bond in carbohydrates Glycosidic bond in DNA
  • 11. Peptide bond  Amino acid are covalently linked by amide bonds (–CO-NH-) (Peptide Bonds)  The resulting molecules are called Peptides & Proteins  Polypeptides and proteins are chains of amino acids held together by peptide bonds
  • 12. Disulfide bond  A disulfide bond is a covalent bond, usually derived by the coupling of two thiol groups. The linkage is also called an SS- bond or disulfide bridge. The overall connectivity is therefore R-S-S-R  formed between the thiol groups of cysteine residues.
  • 13. Phosphodiester bond  A phosphodiester bond is a group of strong covalent bonds between a phosphate group and two 5-carbon ring carbohydrates (pentoses) over two ester bonds.  In DNA and RNA, the phosphodiester bond is the linkage between the 3' carbon atom of one sugar molecule and the 5' carbon atom of another; the sugar molecules being deoxyribose in DNA and ribose in RNA.
  • 16. Hydrogen bond  A hydrogen bond is the electromagnetic attractive interaction of a hydrogen atom and an electronegative atom, such as nitrogen, oxygen or fluorine, that comes from another molecule or chemical group  Intramolecular hydrogen bonding is partly responsible for the secondary, tertiary, and quaternary structures of proteins and nucleic acids
  • 17. Hydrogen bonding in DNA Hydrogen bonding in proteins
  • 18. Van der waals bonds  Van der waals force is the sum of the attractive or repulsive forces between molecules (or between parts of the same molecule) other than those due to covalent bonds, the hydrogen bonds, or the electrostatic interaction of ions with one another or with neutral molecules
  • 19. Hydrophobic bond  Meaning “Water fearing”  The hydrophobic effect is the observed tendency of nonpolar substances to aggregate in aqueous solution and exclude water molecules
  • 20.
  • 21. IONIC BOND Bond formed between two ions by the transfer of electrons
  • 22. Formation of Ions from Metals  Ionic compounds result when metals react with nonmetals  Metals lose electrons to match the number of valence electrons of their nearest noble gas  Positive ions form when the number of electrons are less than the number of protons Group 1 metals  ion 1+ Group 2 metals  ion 2+
  • 23. Ionic Bond  Between atoms of metals and nonmetals with very different electronegativity  Bond formed by transfer of electrons  Examples; NaCl, CaCl2, K2O  Ionic interactions- Some amino acids have charged R groups, which attract oppositely charged R groups and repel those with like charges.
  • 24.
  • 25. Ionic Bonds: One Big Greedy Thief Dog!
  • 26. 1). Ionic bond – electron from Na is transferred to Cl, this causes a charge imbalance in each atom. The Na becomes (Na+) and the Cl becomes (Cl-), charged particles or ions.
  • 27. Conclusion  Believe it or not, the chemical properties of almost any substance or material in the world depend upon the chemical bonds that make it up.  If it weren't for chemical bonds, every material in the world would have to be one of the 118 elements in the Periodic Table. Instead, atoms from these elements bond together to create chemical compounds.  There are chemical bonds between the atoms in our bodies (especially the elements carbon, hydrogen, and oxygen), the atoms in the air, and the atoms in most plants and synthetic materials.  In fact, chemical bonds are everywhere, and when two elements bond together, their properties often change completely.
  • 28. References  Nelson and cox – Principle of biochemistry. 5th edition  Voet D, Voet JG and Pratt CW – Fundamentals of biochemistry. 2nd edition  www.tokresource.org  www.labspace.open.ac.uk