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Carbohydrate
Glycogen storage: Anderson’s (IV) vs. Cori’s (III) enzyme defect
ABCD:
Anderson’s=Branching enzyme.
Cori’s=Debranching enzyme.
Otherwise, can’t really distinguish clinically.
Glycogen storage: names of types I through VI
“Viagra Pills Cause AMajor Hardon”:
 Von Gierke’s
 Pompe’s
 Cori’s
 Anderson’s
 McArdle’s
 Her’s
Type 1 glycogen storage disease
Type 1 = one (Von), ie Von Giereke’s disease
Glycolysis steps
“Goodness Gracious, Father Franklin Did Go By Picking Pumpkins (to) Prepare Pies”:
 Glucose
 Glucose-6-P
 Fructose-6-P
 Fructose-1,6-diP
 Dihydroxyacetone-P
 Glyceraldehyde-P
 1,3-Biphosphoglycerate
 3-Phosphoglycerate
 2-Phosphoglycerate (to)
 Phosphoenolpyruvate [PEP]
 Pyruvate
‘Did’, ‘By’ and ‘Pies’ tell you the first part of those three: di-, bi-, and py-.
‘PrEPare’ tells location of PEP in the process.
Phosphorylation cascade: action during low glucose
“In the Phasted State, Phosphorylate”:
The phosphorylation cascade becomes active when blood glucose is low.
Citric acid cycle compounds
“Oh Citric Acid Is Of (course) A SiLly STupid Funny Molecule”:
 Oxaloacetate
 Citrate
 Aconitate
 Isocitrate
 Oxalosuccinate
 Alpha-ketoglutarate
 SuccinyL-CoA
 SuccinaTe
 Fumarate
 Malate
SilLy and sTupid used to differentiate succinyL and succinaTe
Citric acid cycle compounds
“Can I Keep Selling Sex For Money, Officer?”:
 Citrate
 Isocitrate
 alpha Ketogluterate
 Succinyl CoA
 Succinate
 Fumerate
 Malate
 Oxaloacetate
Citric acid cycle compounds
“Oh! Can I Keep Some Succinate For Myself?”:
 Oxaloacetate
 Citrate
 Isocitrate
 Ketoglutarate
 Succinyl coA
 Succinate
 Fumarate
 Malate
Citric acid cycle compounds
“Our City Is Kept Safe And Sound From Malice”:
 Oxaloacetate
 Citrate
 Isocitrate
 alpha-Ketoglutarate
 Succinyl-CoA
 Succinate
 Fumarate
 Malate
Citric acid cycle compounds
“Can I Ask Sharon Stone For My Orgasm?”:
 Citrate
 Isocitrate
 Alpha-Ketoglutarate
 Succinyl CoA
 Succinate
 Fumerate
 Maleate
 Oxaloacetate
Dicarboxylic acids (alpha, omega) C2 through C10: common names
“Oh My, Such Good Apple Pie, Sweet As Sugar!”:
 Oxalic
 Malonic
 Succinic
 Glutaric
 Adipic
 Pimelic
 Suberic
 Azelaic
 Sebacic
Galactosaemia: enzyme deficiency
GALIPUT:
Galactose 1 Phosphate Uridyl Transferase.
There is an assay called the Galiput test for this.
Hyperglycemia: 3 classic signs and symptoms
DKA
 Dehydrated
 Ketoacidosis
 Acetone breath
Collagen concisely covered
COLLAGEN:
 C-terminal propeptide (procollagen)/ Covalent Cross links/ C vitamin/ Connective
tissue/ Cartilage/ Chondroblasts/ Copper Cofactor (Covalent Cross linking)
 Outside the cell is where collagen normally functions/ Osteoblasts/ Osteogenesis
imperfecta
 Lysyl hydroxylase/ Lysyl oxidase (oxidatively deaminates lysyl and hydroxylysyl
residues to form collagen cross links, last biosynthesis step)
 Long triple helical fibers/ Ligaments
 Alpha chains/ Attached by H bonds form triple helix/ Ascorbate for hydroxylation of
lysyl and prolyl residues of pro-Alpha chains (postranslational modification)
 Gly in every third position/ Glycosylation of hydroxyl group of hydroxylysine
with Glucose and Galactose; GOlgi allows procollagen to GO outside of cell
 Extracellular matrix/ Eye (cornea, sclera)/ Ehlers-Danlos Syndrome
 N-terminal propeptide (procollagen)/ Nonhelical terminal extensions
Note: Procollagen LEAVEs the cell to be cLEAVEd by procollagen peptidases
G6PD: oxidant drugs inducing hemolytic anemia
AAA:
 Antibiotic (eg: sufamethoxazole)
 Antimalarial (eg: primaquine)
 Antipyretics (eg: acetanilid, but not aspirin or acetaminophen)
Carbon monoxide: electron transport chain target
“CO blocks CO”:
Carbon monoxide (CO) blocks Cytochrome Oxidase
(CO)
Electron transport chain: Rotenone’s site of action
Rotenone is a site specific inhibitor of complex one.
Malate-aspartate shuttle
“MAD commute”:
Malate in.
Alpha-ketoglutarate and D (Aspartate) out.

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Mnemonics biochemistry carbohydrates

  • 1. Carbohydrate Glycogen storage: Anderson’s (IV) vs. Cori’s (III) enzyme defect ABCD: Anderson’s=Branching enzyme. Cori’s=Debranching enzyme. Otherwise, can’t really distinguish clinically. Glycogen storage: names of types I through VI “Viagra Pills Cause AMajor Hardon”:  Von Gierke’s  Pompe’s  Cori’s  Anderson’s  McArdle’s  Her’s Type 1 glycogen storage disease Type 1 = one (Von), ie Von Giereke’s disease
  • 2. Glycolysis steps “Goodness Gracious, Father Franklin Did Go By Picking Pumpkins (to) Prepare Pies”:  Glucose  Glucose-6-P  Fructose-6-P  Fructose-1,6-diP  Dihydroxyacetone-P  Glyceraldehyde-P  1,3-Biphosphoglycerate  3-Phosphoglycerate  2-Phosphoglycerate (to)  Phosphoenolpyruvate [PEP]  Pyruvate ‘Did’, ‘By’ and ‘Pies’ tell you the first part of those three: di-, bi-, and py-. ‘PrEPare’ tells location of PEP in the process. Phosphorylation cascade: action during low glucose “In the Phasted State, Phosphorylate”: The phosphorylation cascade becomes active when blood glucose is low. Citric acid cycle compounds
  • 3. “Oh Citric Acid Is Of (course) A SiLly STupid Funny Molecule”:  Oxaloacetate  Citrate  Aconitate  Isocitrate  Oxalosuccinate  Alpha-ketoglutarate  SuccinyL-CoA  SuccinaTe  Fumarate  Malate SilLy and sTupid used to differentiate succinyL and succinaTe Citric acid cycle compounds “Can I Keep Selling Sex For Money, Officer?”:  Citrate  Isocitrate  alpha Ketogluterate  Succinyl CoA  Succinate  Fumerate  Malate
  • 4.  Oxaloacetate Citric acid cycle compounds “Oh! Can I Keep Some Succinate For Myself?”:  Oxaloacetate  Citrate  Isocitrate  Ketoglutarate  Succinyl coA  Succinate  Fumarate  Malate Citric acid cycle compounds “Our City Is Kept Safe And Sound From Malice”:  Oxaloacetate  Citrate  Isocitrate  alpha-Ketoglutarate  Succinyl-CoA  Succinate  Fumarate  Malate Citric acid cycle compounds “Can I Ask Sharon Stone For My Orgasm?”:  Citrate  Isocitrate  Alpha-Ketoglutarate  Succinyl CoA  Succinate  Fumerate  Maleate  Oxaloacetate Dicarboxylic acids (alpha, omega) C2 through C10: common names “Oh My, Such Good Apple Pie, Sweet As Sugar!”:  Oxalic
  • 5.  Malonic  Succinic  Glutaric  Adipic  Pimelic  Suberic  Azelaic  Sebacic Galactosaemia: enzyme deficiency GALIPUT: Galactose 1 Phosphate Uridyl Transferase. There is an assay called the Galiput test for this. Hyperglycemia: 3 classic signs and symptoms DKA  Dehydrated  Ketoacidosis  Acetone breath
  • 6. Collagen concisely covered COLLAGEN:  C-terminal propeptide (procollagen)/ Covalent Cross links/ C vitamin/ Connective tissue/ Cartilage/ Chondroblasts/ Copper Cofactor (Covalent Cross linking)  Outside the cell is where collagen normally functions/ Osteoblasts/ Osteogenesis imperfecta  Lysyl hydroxylase/ Lysyl oxidase (oxidatively deaminates lysyl and hydroxylysyl residues to form collagen cross links, last biosynthesis step)  Long triple helical fibers/ Ligaments  Alpha chains/ Attached by H bonds form triple helix/ Ascorbate for hydroxylation of lysyl and prolyl residues of pro-Alpha chains (postranslational modification)
  • 7.  Gly in every third position/ Glycosylation of hydroxyl group of hydroxylysine with Glucose and Galactose; GOlgi allows procollagen to GO outside of cell  Extracellular matrix/ Eye (cornea, sclera)/ Ehlers-Danlos Syndrome  N-terminal propeptide (procollagen)/ Nonhelical terminal extensions Note: Procollagen LEAVEs the cell to be cLEAVEd by procollagen peptidases G6PD: oxidant drugs inducing hemolytic anemia AAA:  Antibiotic (eg: sufamethoxazole)  Antimalarial (eg: primaquine)  Antipyretics (eg: acetanilid, but not aspirin or acetaminophen) Carbon monoxide: electron transport chain target “CO blocks CO”: Carbon monoxide (CO) blocks Cytochrome Oxidase (CO)
  • 8. Electron transport chain: Rotenone’s site of action Rotenone is a site specific inhibitor of complex one. Malate-aspartate shuttle “MAD commute”: Malate in. Alpha-ketoglutarate and D (Aspartate) out.