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Biotechnology:
How Do We Use What We Know
about Life?
Role of bacteria in technology
• Advantage to using bacteria
– Possess plasmids
• Small extra loops of DNA
– Experience transformation
• Bacteria take up plasmids from surroundings
Role of bacteria in technology
• Advantage to using
bacteria:
– Scientists can
genetically engineer
plasmids by inserting
gene of interest into
bacterial plasmid.
Gene Cloning
• Definition: using bacteria to make multiple
identical copies of a single stretch of DNA.
• Useful in understanding eukaryotic genome.
• Cloning Vector:
– Any vehicle that inserts a fragment of foreign
DNA into the genome of a host cell.
– Example: virus or genetically engineered
plasmid.
– Used in gene therapy.
Genetic Engineering
• Definition: Ability to
precisely manipulate DNA
sequences from widely
different organisms.
• Process requires
– Ability to cut DNA
– To insert foreign DNA
segment
– “Glue” DNA sequences
together
Molecular Scissors
• Restriction enzymes:
– Cut DNA at specific places called recognition sites.
– Form “sticky ends.”
Restriction Sites
Molecular Paste
• DNA Ligase:
– Form bonds between the sugar and phosphate
backbone of the DNA molecule.
• Restriction enzymes and DNA ligase make
possible the combination of DNA from
different organisms into one DNA molecule
– Called recombinant DNA
Making Recombinant DNA
How do we know what size DNA
fragments we have?
• Agarose gel
electrophoresis:
– Allows separation of
DNA on the basis of
size.
– Can visualize DNA to
determine exactly how
large it is.
Making a DNA library
• Need the following:
– A gene of interest
– Restriction enzymes
– Plasmids
– DNA ligase
• Can create a cloning vector using these
tools which can be inserted in a bacteria
• Allow bacteria to reproduce
• DNA library: entire collection of bacterial
cells which contain cloned gene
Screening a DNA Library
• Need to find the gene of interest in the
bacteria or bacterial cells that possess the
gene of interest.
• Use nucleic acid hybridization to find the
gene of interest.
Nucleic Acid Hybridization
• Requires a molecular probe:
– Probe is made of a synthetic single-stranded
DNA whose sequence is complementary to the
gene of interest.
– Also has a built-in marker so scientists can find
it.
• When probe binds to denatured gene of
interest, a hybrid is formed.
Polymerase Chain Reaction
• Allows scientists to make copies of a small
sample of DNA.
• Requires:
– Primers: two synthetic short strands of DNA
that are complementary to each of the two DNA
sequences that flank the gene or DNA to be
copied.
– Heat-resistant DNA polymerase
– Nucleotides
DNA Sequencing
• Determining the base-
by-base order of the
nucleotides in a stretch
of DNA.
• Can help us identify
regions of DNA that
contain genes.
DNA Sequencing
• Makes possible comparisons of DNA
sequences
– between individuals to teach us about our
susceptibility to disease.
– between species to teach us about how we
evolved.
• Also, DNA sequences teach us about the
regulation of gene expression.
Human Genome Project (HGP)
• Overall goal:
– decipher the full set
of genetic
instructions in
human DNA.
– Develop a set of
instructions as a
research tool for
scientists.
Human Genome Project (HGP)
• Several genomes of
model organisms
have been
sequenced as a part
of the project.
What We Have Learned From
Human Genome
• First lesson:Human DNA consists of 3
billion base pairs
– Contain 20,000-25,000 genes
• 2-3 times as many genes as a worm or fruit
fly.
• Approximately 3% of DNA contains the
information to make proteins.
What We Have Learned From
Human Genome
• Second lesson: a greater understanding of
genes themselves.
– Has important implications to understanding
human biology and what goes wrong in disease
states.
– Help us define disease states and predict
possible candidates who are likely to suffer
from a disease based on their nucleotide
sequences.
What We Have Learned From
Human Genome
• Third lesson: lessons about the human
family; both our diversity and evolution.
– Compare base-by-base sequences of DNA
• Any group of individuals have DNA sequences that
are 99.9% identical regardless or origin or ethnicity.
• Points in DNA sequence where the sequences are
not identical between two or more individuals are
called single nucleotide polymorphisms (SNPs)
HPG has Raised Ethical, Social
and Legal Issues
• Who owns genetic
information?
• Should people be
tested for genetic
disorders if there is no
possibility of
treatment?
How Do We Use Biotechnology?
• Gene therapy:
treatment of a genetic
disease by alteration of
the affected person’s
genotype, or the
genotype of the
affected cells.
Stem Cells
• Definition: undifferentiated cells in either
an adult or embryo that can undergo
unlimited number of cell divisions.
– Are totipotent
• Could be used to produce complex human
tissues or replacement organs for people
suffering from disease.
Designer Drugs
• Biotechnology has made it possible to predict the
precise shape of molecules.
– Makes it possible to develop drugs for
therapeutic use.
DNA in The Courtroom
• Can be use to determine paternity
• Identifying individuals in criminal and civil
proceedings.
• Use variable number tandem repeats (VNTR) as
markers.
DNA in The Courtroom
Biotechnology on The Farm
• Goal: To increase the
world’s food
production while
decreasing the costs
and environmental
damage due to
insecticide and
pesticide use.
Biotechnology on The Farm
• Scientists have focused efforts on three areas:
– Developing crops capable of fending off insect
pests without the use of insecticides
– Engineering plants with a greater yield that grow
in a wider ranges of climates
– Make crops that are resistant to herbicides , so that
fields can be treated for weeds without damaging
crops
• Opponents wondering if we are disturbing
ecological balance in the environment
Can Biotechnology Save The
Environment?
• Bioremediation: Use
of microorganisms to
decompose toxic
pollutants into less
harmful compounds.
Risks of Biotechnology
• Two categories of
risks:
– Risks to human
health
– Risks to the
environment
Questioning The Ethics of
Biotechnology
• Privacy and ownership of genetic
information.
• Argue altering genes is unnatural.
– Breaches fundamental boundaries between
species.
• Are scientists interfering with the order of
life?
Where Are We Now?

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Pruitt ppt ch07

  • 1. Biotechnology: How Do We Use What We Know about Life?
  • 2. Role of bacteria in technology • Advantage to using bacteria – Possess plasmids • Small extra loops of DNA – Experience transformation • Bacteria take up plasmids from surroundings
  • 3. Role of bacteria in technology • Advantage to using bacteria: – Scientists can genetically engineer plasmids by inserting gene of interest into bacterial plasmid.
  • 4. Gene Cloning • Definition: using bacteria to make multiple identical copies of a single stretch of DNA. • Useful in understanding eukaryotic genome. • Cloning Vector: – Any vehicle that inserts a fragment of foreign DNA into the genome of a host cell. – Example: virus or genetically engineered plasmid. – Used in gene therapy.
  • 5. Genetic Engineering • Definition: Ability to precisely manipulate DNA sequences from widely different organisms. • Process requires – Ability to cut DNA – To insert foreign DNA segment – “Glue” DNA sequences together
  • 6. Molecular Scissors • Restriction enzymes: – Cut DNA at specific places called recognition sites. – Form “sticky ends.”
  • 8. Molecular Paste • DNA Ligase: – Form bonds between the sugar and phosphate backbone of the DNA molecule. • Restriction enzymes and DNA ligase make possible the combination of DNA from different organisms into one DNA molecule – Called recombinant DNA
  • 10. How do we know what size DNA fragments we have? • Agarose gel electrophoresis: – Allows separation of DNA on the basis of size. – Can visualize DNA to determine exactly how large it is.
  • 11.
  • 12. Making a DNA library • Need the following: – A gene of interest – Restriction enzymes – Plasmids – DNA ligase • Can create a cloning vector using these tools which can be inserted in a bacteria • Allow bacteria to reproduce • DNA library: entire collection of bacterial cells which contain cloned gene
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  • 15. Screening a DNA Library • Need to find the gene of interest in the bacteria or bacterial cells that possess the gene of interest. • Use nucleic acid hybridization to find the gene of interest.
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  • 17. Nucleic Acid Hybridization • Requires a molecular probe: – Probe is made of a synthetic single-stranded DNA whose sequence is complementary to the gene of interest. – Also has a built-in marker so scientists can find it. • When probe binds to denatured gene of interest, a hybrid is formed.
  • 18.
  • 19. Polymerase Chain Reaction • Allows scientists to make copies of a small sample of DNA. • Requires: – Primers: two synthetic short strands of DNA that are complementary to each of the two DNA sequences that flank the gene or DNA to be copied. – Heat-resistant DNA polymerase – Nucleotides
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  • 22. DNA Sequencing • Determining the base- by-base order of the nucleotides in a stretch of DNA. • Can help us identify regions of DNA that contain genes.
  • 23. DNA Sequencing • Makes possible comparisons of DNA sequences – between individuals to teach us about our susceptibility to disease. – between species to teach us about how we evolved. • Also, DNA sequences teach us about the regulation of gene expression.
  • 24. Human Genome Project (HGP) • Overall goal: – decipher the full set of genetic instructions in human DNA. – Develop a set of instructions as a research tool for scientists.
  • 25. Human Genome Project (HGP) • Several genomes of model organisms have been sequenced as a part of the project.
  • 26. What We Have Learned From Human Genome • First lesson:Human DNA consists of 3 billion base pairs – Contain 20,000-25,000 genes • 2-3 times as many genes as a worm or fruit fly. • Approximately 3% of DNA contains the information to make proteins.
  • 27. What We Have Learned From Human Genome • Second lesson: a greater understanding of genes themselves. – Has important implications to understanding human biology and what goes wrong in disease states. – Help us define disease states and predict possible candidates who are likely to suffer from a disease based on their nucleotide sequences.
  • 28. What We Have Learned From Human Genome • Third lesson: lessons about the human family; both our diversity and evolution. – Compare base-by-base sequences of DNA • Any group of individuals have DNA sequences that are 99.9% identical regardless or origin or ethnicity. • Points in DNA sequence where the sequences are not identical between two or more individuals are called single nucleotide polymorphisms (SNPs)
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  • 30. HPG has Raised Ethical, Social and Legal Issues • Who owns genetic information? • Should people be tested for genetic disorders if there is no possibility of treatment?
  • 31. How Do We Use Biotechnology? • Gene therapy: treatment of a genetic disease by alteration of the affected person’s genotype, or the genotype of the affected cells.
  • 32. Stem Cells • Definition: undifferentiated cells in either an adult or embryo that can undergo unlimited number of cell divisions. – Are totipotent • Could be used to produce complex human tissues or replacement organs for people suffering from disease.
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  • 34. Designer Drugs • Biotechnology has made it possible to predict the precise shape of molecules. – Makes it possible to develop drugs for therapeutic use.
  • 35. DNA in The Courtroom • Can be use to determine paternity • Identifying individuals in criminal and civil proceedings. • Use variable number tandem repeats (VNTR) as markers.
  • 36. DNA in The Courtroom
  • 37. Biotechnology on The Farm • Goal: To increase the world’s food production while decreasing the costs and environmental damage due to insecticide and pesticide use.
  • 38. Biotechnology on The Farm • Scientists have focused efforts on three areas: – Developing crops capable of fending off insect pests without the use of insecticides – Engineering plants with a greater yield that grow in a wider ranges of climates – Make crops that are resistant to herbicides , so that fields can be treated for weeds without damaging crops • Opponents wondering if we are disturbing ecological balance in the environment
  • 39. Can Biotechnology Save The Environment? • Bioremediation: Use of microorganisms to decompose toxic pollutants into less harmful compounds.
  • 40. Risks of Biotechnology • Two categories of risks: – Risks to human health – Risks to the environment
  • 41. Questioning The Ethics of Biotechnology • Privacy and ownership of genetic information. • Argue altering genes is unnatural. – Breaches fundamental boundaries between species. • Are scientists interfering with the order of life?
  • 42. Where Are We Now?