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Fruit and Nut Crop Wild Relatives in
 the United States: a Surprisingly Rich
               Resource




Stephanie L. Greene1, Heidi Schwaninger2
USDA, ARS NPGS-Plant Germplasm Introduction and Testing1,
Prosser, WA; Plant Genetic Resources Unit2, Geneva, NY.
New urgency to conserve and
           use CWR
Jarvis et al. (2008) modeled the impact of climate change
on CWR of peanut, potato and cowpea and reported that
extinction was predicted for 16-22 % of the species, and
that distribution areas would be reduced by an average of
85-94 %, over the next 50 years. At the same time plant
breeders are looking to CWR to develop crops adapted
to climate change.


 Global Climate Change
Protecting CWR
                                     Species in the US
                                   Flora of North America
                                   describes more than 20,000
                                   species of native and
                                   naturalized plants


The NPGS currently houses over 540,000 accessions representing
over 13,500 species (GRIN 2011), yet only 2.6 % of our collection is
wild germplasm collected in the United States. Are we adequately
conserving U.S. CWR?

 Without a comprehensive inventory, how
 can we develop a strategy for conserving
 crop wild relatives found in our own back
                   yard?
Developing the U.S. CWR Inventory

• CWR definition of Maxted et al. 2006 used. Include 3o gene pool
species when important resource
• Comprehensive: agronomic crops, fruits, nuts, forages, ornamentals,
herbs, revegetation, timber, traditional/indigenous. Domesticated ,
partial-domesticated, wild crops
• Coverage: Native and naturalized plants in United States
• Sources: GRIN World Economic Plants Database (Wiersema and León
(1999); Flora of North America; Herbs of Commerce, McGuffin et al.
(2000), Native Seed Network database (www.nativeseednetwork.org).
• Draft inventory sent to 50 specialists for peer review
Inventory Database
Field                 Description
CWR Taxon             Genus species subspecific epithet, tax.
                      authority(GRIN nomenclature)
CWR Common Name       GRIN

Ex Situ               Number of wild accessions held in ex situ collections:
                      NPGS; University of Arizona Desert Legume
                      Program; USDA Forest Service National Seed
                      Laboratory
Occurrence            Coded: Endemic, Native, Naturalized. Data came
                      from the following databases: GRIN (2010), USDA
                      NRCS (2010)
Conservation Status   G- Global, T- Infraspecific taxon rank; 1-Critically
                      imperiled, 2-Imperiled, 3-Vulnerable, 4-Apparently
                      secure, 5-Secure. NatureServe Conservation Ranking
                      is generally concordant to the IUCN Red List ranking
                      system (NatureServe 2010)
Field                 Description
Noxious Weed Status   GRIN (2010), USDA NRCS
                      (2010)
Crop Common Name      GRIN (2010)

Crop Gene Pool        Gene pool 1,2,3 that CWR falls into

Gene Pool Citation    Citation of literature used to make gene pool
                      designation
Crop Use              There are 8 use fields to accommodate multiple uses.
                      Use categories are from Wiersema and León (1999)
Preliminary
inventory
contained
2600 taxa
Most CWR are for wild or partially
domesticated crops used for timber,
revegetation, forage, medicinal or
ornamental purposes.
364 CWR taxa are
useful for breeding
65 crops
55 % of US CWR Species are Potential
  Resources for Fruit and Nut Crop
           Improvement
                             Fruit
                             Nut
                             Other
Fruit Species Naturalized
                 in the US
•     Carica papaya                          Papaya
•     Citrus hybrids, C. reticulata          Lime, lemon, orange, grapefruit,
                                                      tangerine
•     Cocos nucifera                         Coconut
•     Ficus carica                           Common Fig
•     Manilkara zapota                       Sapodilla
•     Morus alba                             White mulberry
•     Musa acuminata                         Banana
•     Olea europaea                          Olive
•     Prunus avium, P. cerasus, P. persica   Mazzard, Sour cherry, Peach
•     Psidium cattleianum                    Strawberry Guava
•     Psidium guajava                        Guava
•     Pyrus communis                         Pear
•     Rubus laciniatus                       Cutleaf Blackberry
•     Rubus parvifolius, R. phoenicolasius   Japenese raspberry , wineberry
•     Ziziphus jujuba                        Jujube

     Flora of North American (1993+), Coder (1998), NRCS Plants Database (2011)
Vulnerable CWR
Taxa                   Common                Ex Situ # Status
Juglans hindsii        Hinds Black Walnut    18        G1
Rubus macraei          Akalakala             2         G2
Rubus hawaiensis       Hawaii Blackberry     14        G2G3
Juglans californica    California walnut     30        G3
Prunus geniculata      Scrub Plum            1         G3
Prunus minutiflora     Texas Almond          0         G3
Prunus texana          Texas Peachbush       2         G3
Ribes speciosum        Fuchsia Gooseberry    2         G3
Ribes viburnifolium    Evergreen Currant     5         G3
Vitis rupestris        Rock Grape            59        G3
Ribes californicum     Hillside Gooseberry   1         G3
Ribes niveum           White Current         8         G3
Vulnerable CWR
Taxa                   Common                 Ex Situ # Status
                                        Only one confirmed,
Juglans hindsii                 Hinds         18          G1
Rubus macraei          Akalakala        native2occurrenceG2appears
Rubus hawaiensis       Hawaii Blackberryviable14 of 2003.G2G3
                                               as           Widely
Juglans californica    California walnut
                                        naturalized in cismontane
                                              30          G3
Prunus geniculata      Scrub Plum             1           G3
Prunus minutiflora     Texas Almond CA. Threatened by
                                              0           G3
Prunus texana          Texas Peachbush  hybridization with
                                              2           G3
Ribes speciosum
                                        orchard trees, G3
                       Fuchsia Gooseberry     2
Ribes viburnifolium    Evergreen Currant      5           G3
Vitis rupestris        Rock Grape       urbanization, andG3
                                              59
Ribes californicum                      conversion to agriculture.
                       Hillside Gooseberry    1           G3
Ribes niveum           White Current      8            G3
Vulnerable CWR
Taxa                   Common                 Ex Situ # Status
Juglans hindsii        Hinds Black Walnut     18             G1
Rubus macraei          Akalakala              2              G2
Rubus hawaiensis       Hawaii Blackberry      14             G2G3
Juglans californica    California walnut      30             G3
Prunus geniculata      Scrub Plum             1              G3
Prunus minutiflora     Texas Almond           0              G3
Prunus texana          Texas Peachbush        2              G3
Ribes speciosum        Fuchsia Gooseberry     2              G3
Ribes viburnifolium    Evergreen Currant      5              G3
Vitis rupestris        Rock Grape             59             G3
Ribes californicum     Hillside Gooseberry    1              G3
          Rubus hawaiensis
Ribes niveum           White Current          8              G3
                                      Photo by Forest and Kim Star
CWR of Crops
•    Carya illinoinensis     Pecan
•    Fragaria × ananassa     Strawberry
•    Juglans regia           PersianWalnut
•    Prunus salicina         Japanese Plum
•    Ribes nigrum            Black Current
•    Ribes uva-crispa        Gooseberry
•    Rubus fruticosus        Blackberry
•    Rubus idaeus            Red Raspberry
•    Vaccinium corymbosum    Highbush Blueberry
•    Vaccinium macrocarpon   Cranberry
•    Vitis vinifera          Wine Grape
CWR of Pecan
Carya aquatica
C. cordiformis
C. floridana
C. glabra
C. illinoinensis
                     C. illinoinensis
C. laciniosa
C. myristiciformis
C. ovalis
C. ovata
C. texana
C. tomentosa
CWR of Strawberry
F. chiloensis
F. vesca
F. virginiana


                                   F. virginiana
CWR of Walnut                  J. californica

J. californica
J. cinerea
J. hindsii
J. microcarpa
J. major
J. nigra            J. nigra       Lawrence Kelly
CWR of Japanese Plum
P. americana
P. angustifolia
P. geniculata
P. hortulana
P. maritima
P. minutiflora
P. munsoniana
P. nigra
P. pumila                Prunus

P. pumila var. besseyi
P. subcordata
P. texana
P. virginiana
CWR of Black
 Current
       Ribes americanum
       Ribes aureum
       Ribes bracteosum
       Ribes cereum

  CWR of Gooseberry
                                                R. niveum
                            Ribes divaricatum
                            Ribes hirtellum
   R. divaricatum
                            Ribes niveum
Photo: www.plantsystematics.org
Rubus allegheniensis
 CWR of Black Berry                           Rubus argutus
                                              Rubus canadensis
                                              Rubus cuneifolius
                                              Rubus frondosus
                                              Rubus setosus
                                              Rubus trivialis
                           R.frondosus
                                              Rubus ursinus.
 Photo from http://www.plantsystematics.org


CWR of Red Raspberry
           Rubus hawaiensis
           Rubus leucodermis
           Rubus macraei
           Rubus occidentalis                 R. hawaiensis
CWR of High Bush Blue Berry
(Vaccinium corymbosum)                             V. angustifolium

 Vaccinium angustifolium
 Vaccinium arboretum
 Vaccinium caespitosum
 Vaccinium corymbosum
 Vaccinium darrowii
 Vaccinium deliciosum
 Vaccinium elliottii
 Vaccinium ovatum
 Vaccinium tenellum
 Vaccinium uliginosum
 Vaccinium virgatum                      V. corymbosum
                           Photos from http://www.plantsystematics.org
CWR of Cranberry
Vaccinium macrocarpon
Vaccinium oxycoccos




        V. oxycoccos
V. labrusca
CWR of Grape
Vitis ×champinii
Vitis acerifolia
Vitis aestivalis
Vitis cinerea
Vitis labrusca
                                      V. rotundifolia
Vitis monticola
Vitis riparia
Vitis rotundifolia
Vitis rupestris
Vitis shuttleworthii
                       Photos from http://www.plantsystematics.org
Some Native Fruits and Nuts Enjoyed
              Locally



    Mayhaw (Crataegus opaca, C. aestivalis)




Paw Paw (Asimina triloba)
Allegheny chinkapin, (Castanea pumila)




 Prickly Pear (Opuntia fragilis, O. polyacantha)
What are the Next Steps for
       Conserving US CWR?
•  Engage and partner with conservation community
on national and state level
• Refine and prioritize our inventory. What crops
are most important to focus on?
•  Identify gaps in our current ex situ collections
• Acquire germplasm for ex situ storage
• Implement a gap analysis of protected areas.
Where do cwr occur in protected areas? Are there
CWR hotspots?
• Work with land managers to establish and monitor
in situ CWR reserves

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CWR US Fruit and Nut Presentation

  • 1. Fruit and Nut Crop Wild Relatives in the United States: a Surprisingly Rich Resource Stephanie L. Greene1, Heidi Schwaninger2 USDA, ARS NPGS-Plant Germplasm Introduction and Testing1, Prosser, WA; Plant Genetic Resources Unit2, Geneva, NY.
  • 2. New urgency to conserve and use CWR Jarvis et al. (2008) modeled the impact of climate change on CWR of peanut, potato and cowpea and reported that extinction was predicted for 16-22 % of the species, and that distribution areas would be reduced by an average of 85-94 %, over the next 50 years. At the same time plant breeders are looking to CWR to develop crops adapted to climate change. Global Climate Change
  • 3. Protecting CWR Species in the US Flora of North America describes more than 20,000 species of native and naturalized plants The NPGS currently houses over 540,000 accessions representing over 13,500 species (GRIN 2011), yet only 2.6 % of our collection is wild germplasm collected in the United States. Are we adequately conserving U.S. CWR? Without a comprehensive inventory, how can we develop a strategy for conserving crop wild relatives found in our own back yard?
  • 4. Developing the U.S. CWR Inventory • CWR definition of Maxted et al. 2006 used. Include 3o gene pool species when important resource • Comprehensive: agronomic crops, fruits, nuts, forages, ornamentals, herbs, revegetation, timber, traditional/indigenous. Domesticated , partial-domesticated, wild crops • Coverage: Native and naturalized plants in United States • Sources: GRIN World Economic Plants Database (Wiersema and León (1999); Flora of North America; Herbs of Commerce, McGuffin et al. (2000), Native Seed Network database (www.nativeseednetwork.org). • Draft inventory sent to 50 specialists for peer review
  • 5. Inventory Database Field Description CWR Taxon Genus species subspecific epithet, tax. authority(GRIN nomenclature) CWR Common Name GRIN Ex Situ Number of wild accessions held in ex situ collections: NPGS; University of Arizona Desert Legume Program; USDA Forest Service National Seed Laboratory Occurrence Coded: Endemic, Native, Naturalized. Data came from the following databases: GRIN (2010), USDA NRCS (2010) Conservation Status G- Global, T- Infraspecific taxon rank; 1-Critically imperiled, 2-Imperiled, 3-Vulnerable, 4-Apparently secure, 5-Secure. NatureServe Conservation Ranking is generally concordant to the IUCN Red List ranking system (NatureServe 2010)
  • 6. Field Description Noxious Weed Status GRIN (2010), USDA NRCS (2010) Crop Common Name GRIN (2010) Crop Gene Pool Gene pool 1,2,3 that CWR falls into Gene Pool Citation Citation of literature used to make gene pool designation Crop Use There are 8 use fields to accommodate multiple uses. Use categories are from Wiersema and León (1999)
  • 7. Preliminary inventory contained 2600 taxa Most CWR are for wild or partially domesticated crops used for timber, revegetation, forage, medicinal or ornamental purposes. 364 CWR taxa are useful for breeding 65 crops
  • 8. 55 % of US CWR Species are Potential Resources for Fruit and Nut Crop Improvement Fruit Nut Other
  • 9. Fruit Species Naturalized in the US •  Carica papaya Papaya •  Citrus hybrids, C. reticulata Lime, lemon, orange, grapefruit, tangerine •  Cocos nucifera Coconut •  Ficus carica Common Fig •  Manilkara zapota Sapodilla •  Morus alba White mulberry •  Musa acuminata Banana •  Olea europaea Olive •  Prunus avium, P. cerasus, P. persica Mazzard, Sour cherry, Peach •  Psidium cattleianum Strawberry Guava •  Psidium guajava Guava •  Pyrus communis Pear •  Rubus laciniatus Cutleaf Blackberry •  Rubus parvifolius, R. phoenicolasius Japenese raspberry , wineberry •  Ziziphus jujuba Jujube Flora of North American (1993+), Coder (1998), NRCS Plants Database (2011)
  • 10. Vulnerable CWR Taxa Common Ex Situ # Status Juglans hindsii Hinds Black Walnut 18 G1 Rubus macraei Akalakala 2 G2 Rubus hawaiensis Hawaii Blackberry 14 G2G3 Juglans californica California walnut 30 G3 Prunus geniculata Scrub Plum 1 G3 Prunus minutiflora Texas Almond 0 G3 Prunus texana Texas Peachbush 2 G3 Ribes speciosum Fuchsia Gooseberry 2 G3 Ribes viburnifolium Evergreen Currant 5 G3 Vitis rupestris Rock Grape 59 G3 Ribes californicum Hillside Gooseberry 1 G3 Ribes niveum White Current 8 G3
  • 11. Vulnerable CWR Taxa Common Ex Situ # Status Only one confirmed, Juglans hindsii Hinds 18 G1 Rubus macraei Akalakala native2occurrenceG2appears Rubus hawaiensis Hawaii Blackberryviable14 of 2003.G2G3 as Widely Juglans californica California walnut naturalized in cismontane 30 G3 Prunus geniculata Scrub Plum 1 G3 Prunus minutiflora Texas Almond CA. Threatened by 0 G3 Prunus texana Texas Peachbush hybridization with 2 G3 Ribes speciosum orchard trees, G3 Fuchsia Gooseberry 2 Ribes viburnifolium Evergreen Currant 5 G3 Vitis rupestris Rock Grape urbanization, andG3 59 Ribes californicum conversion to agriculture. Hillside Gooseberry 1 G3 Ribes niveum White Current 8 G3
  • 12. Vulnerable CWR Taxa Common Ex Situ # Status Juglans hindsii Hinds Black Walnut 18 G1 Rubus macraei Akalakala 2 G2 Rubus hawaiensis Hawaii Blackberry 14 G2G3 Juglans californica California walnut 30 G3 Prunus geniculata Scrub Plum 1 G3 Prunus minutiflora Texas Almond 0 G3 Prunus texana Texas Peachbush 2 G3 Ribes speciosum Fuchsia Gooseberry 2 G3 Ribes viburnifolium Evergreen Currant 5 G3 Vitis rupestris Rock Grape 59 G3 Ribes californicum Hillside Gooseberry 1 G3 Rubus hawaiensis Ribes niveum White Current 8 G3 Photo by Forest and Kim Star
  • 13. CWR of Crops •  Carya illinoinensis Pecan •  Fragaria × ananassa Strawberry •  Juglans regia PersianWalnut •  Prunus salicina Japanese Plum •  Ribes nigrum Black Current •  Ribes uva-crispa Gooseberry •  Rubus fruticosus Blackberry •  Rubus idaeus Red Raspberry •  Vaccinium corymbosum Highbush Blueberry •  Vaccinium macrocarpon Cranberry •  Vitis vinifera Wine Grape
  • 14. CWR of Pecan Carya aquatica C. cordiformis C. floridana C. glabra C. illinoinensis C. illinoinensis C. laciniosa C. myristiciformis C. ovalis C. ovata C. texana C. tomentosa
  • 15. CWR of Strawberry F. chiloensis F. vesca F. virginiana F. virginiana CWR of Walnut J. californica J. californica J. cinerea J. hindsii J. microcarpa J. major J. nigra J. nigra Lawrence Kelly
  • 16. CWR of Japanese Plum P. americana P. angustifolia P. geniculata P. hortulana P. maritima P. minutiflora P. munsoniana P. nigra P. pumila Prunus P. pumila var. besseyi P. subcordata P. texana P. virginiana
  • 17. CWR of Black Current Ribes americanum Ribes aureum Ribes bracteosum Ribes cereum CWR of Gooseberry R. niveum Ribes divaricatum Ribes hirtellum R. divaricatum Ribes niveum Photo: www.plantsystematics.org
  • 18. Rubus allegheniensis CWR of Black Berry Rubus argutus Rubus canadensis Rubus cuneifolius Rubus frondosus Rubus setosus Rubus trivialis R.frondosus Rubus ursinus. Photo from http://www.plantsystematics.org CWR of Red Raspberry Rubus hawaiensis Rubus leucodermis Rubus macraei Rubus occidentalis R. hawaiensis
  • 19. CWR of High Bush Blue Berry (Vaccinium corymbosum) V. angustifolium Vaccinium angustifolium Vaccinium arboretum Vaccinium caespitosum Vaccinium corymbosum Vaccinium darrowii Vaccinium deliciosum Vaccinium elliottii Vaccinium ovatum Vaccinium tenellum Vaccinium uliginosum Vaccinium virgatum V. corymbosum Photos from http://www.plantsystematics.org
  • 20. CWR of Cranberry Vaccinium macrocarpon Vaccinium oxycoccos V. oxycoccos
  • 21. V. labrusca CWR of Grape Vitis ×champinii Vitis acerifolia Vitis aestivalis Vitis cinerea Vitis labrusca V. rotundifolia Vitis monticola Vitis riparia Vitis rotundifolia Vitis rupestris Vitis shuttleworthii Photos from http://www.plantsystematics.org
  • 22. Some Native Fruits and Nuts Enjoyed Locally Mayhaw (Crataegus opaca, C. aestivalis) Paw Paw (Asimina triloba)
  • 23. Allegheny chinkapin, (Castanea pumila) Prickly Pear (Opuntia fragilis, O. polyacantha)
  • 24. What are the Next Steps for Conserving US CWR? •  Engage and partner with conservation community on national and state level • Refine and prioritize our inventory. What crops are most important to focus on? •  Identify gaps in our current ex situ collections • Acquire germplasm for ex situ storage • Implement a gap analysis of protected areas. Where do cwr occur in protected areas? Are there CWR hotspots? • Work with land managers to establish and monitor in situ CWR reserves