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Principles of Effective Writing
1 1/27/2024
Principles of Effective Writing
 "In science, the credit goes to the man
who convinces the world, not to the man
to whom the idea first occurs."
--Sir William Osler
2 1/27/2024
Principles of Effective Writing
 "Writing is an art. But when it is writing to
inform it comes close to being a science
as well."
 --Robert Gunning,The Technique of Clear Writing
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Principles of Effective Writing
 Introduction
 What makes good writing?
 What does it take to be a good writer?
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Principles of Effective Writing
 What makes good writing?
 Good writing communicates an idea clearly and effectively.
 Good writing is elegant and stylish.
Takes time,
revision, and a
good editor!
Takes time having
something to say
and clear
thinking.
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Principles of Effective Writing
What makes a good writer (outside of poets,
maybe):
 Having something to say.
 Logical and clear thinking.
 A few simple, learnable rules of style (the tools we’ll
learn in this class).
Take home message: Writing to inform is a craft,
not an art. Clear, effective writing can be learned!
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Principles of Effective Writing
 Clear writing starts with clear thinking.
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Principles of Effective Writing
Before you start writing, ask:
“What am I trying to say?”
 When you finish writing, ask:
“Have I said it?”
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Principles of Effective Writing
Words
• Reduce dead weight words and phrases
• Get rid of jargon and repetition
“Verbose is not a synonym for literary.”
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Principles of Effective Writing
Examples:
“I would like to assert that the author should
be considered to be a buffoon.”

“The author is a buffoon.”
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Principles of Effective Writing
“The expected prevalence of mental retardation,
based on the assumption of a normal
distribution of intelligence in the population, is
stated to be theoretically about 2.5%.”
Examples:
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Principles of Effective Writing
“The expected prevalence of mental retardation,
based on the assumption of a normal
distribution of intelligence in the population, is
stated to be theoretically about 2.5%.”
Examples:
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Principles of Effective Writing
“The expected prevalence of mental retardation,
based on the assumption of a normal
distribution of intelligence in the population, is
stated to be theoretically about 2.5%.

“The expected prevalence of mental retardation, if
intelligence is normally distributed, is 2.5%.”
Examples:
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Principles of Effective Writing
Examples:
“This paper provides a review of the basic tenets of cancer biology
study design, using as examples studies that illustrate the
methodologic challenges or that demonstrate successful solutions
to the difficulties inherent in biological research.”
s
and
“This paper reviews cancer biology study design, using
examples that illustrate specific challenges and solutions.”
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Principles of Effective Writing
Hunt down and cast out all unneeded
words that might slow your reader.
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Principles of Effective Writing
Very, really, quite, basically,
generally
These words seldom add anything
useful. Try the sentence without
them and see if it improves.
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Principles of Effective Writing
Watch out for the verb “to be”
Often “there are” is extra weight.
 There are many students who like
writing.
 Many students like writing.
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Principles of Effective Writing
Dead weight phrases
 in the event that
 in the nature of
 it has been estimated that
 it seems that
 the point I am trying to make
 what I mean to say is
 it may be argued that
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Principles of Effective Writing
Dead weight phrases
 for the most part
 for the purpose of
 in a manner of speaking
 in a very real sense
 in my opinion
 in the case of
 in the final analysis
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Principles of Effective Writing
 All three of the the three
 Fewer in number fewer
 Give rise to cause
 In all cases always
 In a position to can
 In close proximity to near
 In order to to
Clunky phrase Equivalent
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Principles of Effective Writing
 A majority of most
 A number of many
 Are of the same opinion agree
 At the present moment now
 Less frequently occurring rare
Clunky phrase Equivalent
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Principles of Effective Writing
 With the possible exception of except
 Due to the fact that because
 For the purpose of for
Beware of Use instead
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Principles of Effective Writing
Wordy Pointed
in spite of the fact that although
in the event that if
new innovations innovations
one and the same the same
period of four days four days
personal opinion opinion
shorter/longer in length shorter/longer
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Principles of Effective Writing
Example:
“Brain injury incidence shows two peak
periods in almost all reports: rates are the
highest in young people, and the elderly.”
More punch
“Brain injury incidence peaks in the young
and the elderly.”
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Principles of Effective Writing
MYTH: The passive voice is more objective.
It’s not more objective, just more vague.
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Principles of Effective Writing
Passive:
To study DNA repair mechanics, this study on hamster cell
DNA was carried out.
More objective? No! More confusing!

Active:
To study DNA repair mechanics, we carried out this study
on hamster cell DNA. 1/27/2024
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Principles of Effective Writing
Passive:
General dysfunction of the immune system has
been suggested at the leukocyte level in both
animal and human studies.
More objective? No! More confusing!

Active:
Both human and animal studies suggest that
diabetics have general immune dysfunction at the
leukocyte level. 1/27/2024
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Principles of Effective Writing
The Active Voice is
direct, vigorous, natural, and informative.
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Principles of Effective Writing
A note about breaking the rules…
Most writing rules are guidelines, not
laws, and can be broken when the
occasion calls for it.
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Principles of Effective Writing
Eliminate negatives; use positive
constructions instead
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Principles of Effective Writing
 He was not often on time
 He usually came late.
 She did not think that studying writing
was a sensible use of one’s time.
 She thought studying writing was a waste of time.
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Principles of Effective Writing
 Not honest dishonest
 Not important trifling
 Does not have lacks
 Did not remember forgot
 Did not pay attention to ignored
 Did not have much confidence distrusted
 Did not succeed failed
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Principles of Effective Writing
Lists of ideas (and number lists of ideas) should
be written in parallel form.
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Principles of Effective Writing
Parallelism
Not Parallel:
If you want to be a good doctor, you must study hard,
critically think about the medical literature, and you
should be a good listener.
Parallel:
If you want to be a good doctor you must study hard,
listen well, and think critically about the medical
literature. (imperative, imperative, imperative)
Parallel:
If you want to be a good doctor, you must be a good
student, a good listener, and a critical thinker about
the medical literature. (noun, noun, noun)
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Writing a Scientific Manuscript
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The Scientific Manuscript
The Abstract, Introduction, and Discussion
sections
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The Scientific Manuscript
Abstracts
Abstracts (ab=out, trahere=pull; “to pull out”)
 Overview of the main story
 Gives highlights from each section of the paper
 Limited length (100-300 words, typically)
 Stands on its own
 Used, with title, for electronic search engines
 Most often, the only part people read
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The Scientific Manuscript
Abstracts
Gives:
1. Background
2. Question asked
 “We asked whether,” “We hypothesized that,”…etc.
3. Experiment(s) done
 Material studied (molecule, cell line, tissue, organ) or the animal or
human population studied
 The experimental approach or study design and the independent and
dependent variables
4. Results found
 Key results found
 Minimal raw data (prefer summaries)
5. The answer to the question asked
6. Implication, speculation, or recommendation
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The Scientific Manuscript
Abstracts
Abstracts may be structured (with subheadings)
or free-form.
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The Scientific Manuscript
Introduction
Introduction Section
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The Scientific Manuscript
Introduction
Introduction
1. What’s known
2. What’s unknown
 limitations and gaps in previous studies
3. Your burning question
4. Your experimental approach
5. Why your experimental approach is new and different
and important
Critical literature review
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The Scientific Manuscript
Introduction
Tell a story:
 Write it in plain English, not tech-speak.
 Take the reader step by step from what is known to
what is unknown. End with your specific question.
(KnownUnknownQuestion)
 Emphasize what is new and important about your
work.
 Do not state the answer to the research question.
 Do not include results or implications.
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Introduction
 Overweight, Obesity, and Mortality from Cancer in a
Prospectively Studied Cohort of U.S. Adults
Eugenia E. Calle, Ph.D., Carmen Rodriguez, M.D., M.P.H., Kimberly
Walker-Thurmond, B.A., and Michael J. Thun, M.D.
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The relations between excess body weight and mortality, not only from all
causes but also from cardiovascular disease, are well established.1,2,3,4,5,6
Although we have known for some time that excess weight is also an important
factor in death from cancer,7 our knowledge of the magnitude of the relation, both
for all cancers and for cancers at individual sites, and the public health effect of
excess weight in terms of total mortality from cancer is limited. Previous studies
have consistently shown associations between adiposity and increased risk of
cancers of the endometrium, kidney, gallbladder (in women), breast (in
postmenopausal women), and colon (particularly in men).8,9,10,11,12
Adenocarcinoma of the esophagus has been linked to obesity.11,13,14 Data on
cancers of the pancreas, prostate, liver, cervix, and ovary and on hematopoietic
cancers are scarce or inconsistent.7,8,9,10,11,15,16,17 The lack of consistency may be
attributable to the limited number of studies (especially those with prospective
cohorts), the limited range and variable categorization of overweight and obesity
among studies, bias introduced by reverse causality with respect to smoking-
related cancers, and possibly real differences between the effects of overweight
and obesity on the incidence of cancer and on the rates of death from some
cancers.18,19
We conducted a prospective investigation in a large cohort of U.S. men and
women to determine the relations between body-mass index (the weight in
kilograms divided by the square of the height in meters) and the risk of death
from cancer at specific sites. This cohort has been used previously to examine
the association of body-mass index and death from any cause.5
What’s known What’s unknown
What’s known What’s unknown
Gaps/limitations of
previous studies
“This study will
answer the
question with
better methods.”
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The Scientific Manuscript
THE DISCUSSION
The Discussion is the section that…
• Gives you the most freedom
• Gives you the most chance to put good
writing on display
• Is the most challenging to write
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The Scientific Manuscript
The Discussion
Follow your rules for good writing!
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The Scientific Manuscript
The Discussion
The purpose of the discussion:
• Answer the question posed in the Introduction
• Support your conclusion with details (yours, others)
• Defend your conclusion (acknowledge limits)
• Highlight the broader implications of the work
i.e., What do my results mean and why should anyone
care?
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The Scientific Manuscript
The Discussion
The Introduction moved from general to specific.
The discussion moves from specific to general.
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The Scientific Manuscript
The Discussion
Elements of the typical discussion section…
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1. Key finding (answer to the question(s) asked in Intro.)
• Supporting explanation, details (lines of evidence)
• Possible mechanisms or pathways
• Is this finding novel?
2. Key secondary findings
3. Context
• Compare your results with other people’s results
• Compare your results with existing paradigms
• Explain unexpected or surprising findings
4. Strengths and limitations
5. What’s next
• Recommended confirmatory studies (“needs to be confirmed”)
• Unanswered questions
• Future directions
6. The “so what?”: implicate, speculate, recommend
• Clinical implications of basic science findings
7. Strong conclusion 1/27/2024
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EXAMPLE: Samaha FF, Iqbal N, Seshadri P, et al. A
low-carbohydrate as compared with a low-fat diet in
severe obesity. N Engl J Med 2003;348:2074-2081.
INTRODUCTION
The differences in health benefits between a carbohydrate-
restricted diet and a calorie- and fat-restricted diet are of
considerable public interest. However, there is concern that a
carbohydrate-restricted diet will adversely affect serum lipid
concentrations.1 Previous studies demonstrating that healthy
volunteers following a low-carbohydrate diet can lose weight have
involved few subjects, and few used a comparison group that
followed consensus guidelines for weight loss.2,3 The reported
effects of a carbohydrate-restricted diet on risk factors for
atherosclerosis have varied.2,3,4 We performed a study
designed to test the hypothesis that severely obese subjects
with a high prevalence of diabetes or the metabolic
syndrome [a] would have a greater weight loss, [b] without
detrimental effects on risk factors for atherosclerosis, while
on a carbohydrate-restricted (low-carbohydrate) diet than on
a calorie- and fat-restricted (low-fat) diet.
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The Scientific Manuscript
The Discussion
1. We found that severely obese subjects with a high
prevalence of diabetes and the metabolic syndrome lost
more weight in a six-month period on a carbohydrate-
restricted diet than on a fat- and calorie-restricted diet.
[answer to a] The greater weight loss in the low-
carbohydrate group suggests a greater reduction in
overall caloric intake, rather than a direct effect of
macronutrient composition. [mechanisms] However, the
explanation for this difference is not clear. Subjects in this
group may have experienced greater satiety on a diet
with liberal proportions of protein and fat. However, other
potential explanations include the simplicity of the diet
and improved compliance related to the novelty of the
diet. [possible mechanisms/unanswered questions]
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The Scientific Manuscript
The Discussion
2. Subjects in the low-carbohydrate group had greater decreases in triglyceride
levels than did subjects in the low-fat group; nondiabetic subjects on the low-
carbohydrate diet had greater increases in insulin sensitivity, and subjects with
diabetes on this diet had a greater improvement in glycemic control. No adverse
effects on other serum lipid levels were observed. [answer to b] Most
studies suggest that lowering triglyceride levels has an overall cardiovascular
benefit.14,15,16 Insulin resistance promotes such atherosclerotic processes as
inflammation,17 decreased size of low-density lipoprotein particles,18 and
endothelial dysfunction.19 Impaired glycemic control in subjects with other
features of the metabolic syndrome markedly increases the risk of coronary
artery disease.20 As expected, we found that the amount of weight lost had a
significant effect on the degree of improvement in these metabolic factors.
[comparison to previous studies and paradigms] However,
even after adjustment for the differences in weight loss between the groups,
assignment to the low-carbohydrate diet predicted greater improvements in
triglyceride levels and insulin sensitivity. [unexpected] Subjects who lost
more than 5 percent of their base-line weight on a carbohydrate-restricted diet
had greater decreases in triglyceride levels than those who lost a similar
amount of weight while following a calorie- and fat-restricted diet.
[supporting details] 1/27/2024
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The Scientific Manuscript
The Discussion
3. There was a consistent trend across weight-loss strata toward
a greater increase in insulin sensitivity in the low-carbohydrate
group, although these changes were small and were not
significant within each stratum. [supporting details:
dose/response] Although greater weight loss could not entirely
account for the greater decrease in triglyceride levels and
increase in insulin sensitivity in the low-carbohydrate group, we
cannot definitively conclude that carbohydrate restriction alone
accounted for this independent effect. [mechanisms] Other
uncontrolled variables, such as the types of carbohydrates
selected (e.g., the proportion of complex carbohydrates or the
ratio of carbohydrate to fiber), or other unknown variables may
have contributed to this effect. In addition, more precise
measurements of insulin sensitivity than we used would be
needed to confirm this effect of a carbohydrate-restricted diet.
[limitations/future studies]
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The Scientific Manuscript
The Discussion
4. Many of our subjects were taking lipid-lowering
medications and hypoglycemic agents. Although
enrolling these subjects introduced confounding
variables, it allowed the inclusion of subjects with the
obesity-related medical disorders typically
encountered in clinical practice. Analyses from which
these subjects were excluded still revealed greater
improvements in insulin sensitivity and triglyceride
levels on a carbohydrate-restricted diet than on a fat-
and calorie-restricted diet. [limitations and how they
were addressed]
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The Scientific Manuscript
The Discussion
5. Our study included a high proportion of black subjects,
a group previously underrepresented in lifestyle-
modification studies. [strength] As compared with the
white subjects, the black subjects had a smaller
overall weight loss. Future studies should explore
whether greater weight loss in this population can be
achieved by more effective incorporation of culturally
sensitive dietary counseling. [future directions]
6. The high dropout rate in our study occurred very early
and affected our findings. The very early dropout of
these subjects may indicate that attrition most closely
reflected base-line motivation to lose weight, rather
than a response to the dietary intervention itself.
[limitation] 1/27/2024
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The Scientific Manuscript
The Discussion
7. Taken together, our findings demonstrate that severely obese subjects with
a high prevalence of diabetes and the metabolic syndrome lost more weight
during six months on a carbohydrate-restricted diet than on a calorie- and fat-
restricted diet. The carbohydrate-restricted diet led to greater improvements in
insulin sensitivity that were independent of weight loss and a greater
reduction in triglyceride levels in subjects who lost more than 5 percent of
their base-line weight. [conclusion; restate answers to a and b] These
findings must be interpreted with caution, however, since the magnitude of the
overall weight loss relative to our subjects' severe obesity was small, and it is
unclear whether these benefits of a carbohydrate-restricted diet extend
beyond six months. Furthermore, the high dropout rate and the small overall
weight loss demonstrate that dietary adherence was relatively low in both diet
groups. [big picture] This study proves a principle and does not provide
clinical guidance; given the known benefits of fat restriction, future
studies evaluating long-term cardiovascular outcomes are needed
before a carbohydrate-restricted diet can be endorsed. [take-home
message]
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The Scientific Manuscript
The Discussion: verb tense
Verb Tenses (active!):
Past, when referring to study details, results, analyses,
and background research:
• We found that
• They lost more weight than
• Subjects may have experienced
• Miller et al. found
Present, when talking about what the data suggest …
The greater weight loss suggests
The explanation for this difference is not clear.
Potential explanations include
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The Discussion:
1. The answer to the key question asked
2. What’s new
3. The context
• How your results fit into, contradict, or add to what’s known or believed
4. Strengths and limits of the study
5. The “so what?”: implicate, speculate, recommend
6. Overall conclusion
7. Powerful finish
The Scientific Manuscript
Discussion
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The Scientific Manuscript
Methods and Materials,
Results,
Tables and Figures
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The Scientific Manuscript
Methods
Materials and Methods
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The Scientific Manuscript
Methods and Materials
Materials and Methods Overview:
• Give a clear overview of what was done
• Give enough information to replicate the study (like a
recipe!)
• Be complete, but minimize complexity!
1. Break into smaller sections with subheads
2. Cite a reference for commonly used methods
3. Display in a flow diagram where possible
• You may use jargon and the passive voice more liberally
in the M&M section
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Report methods in past tense (“we measured”),
But use present tense to describe how data are
presented in the paper
Writing methods:
verb tenses
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For sequencing, amplicons were purified with ExoSAP-Codes.
The partial nucleotide sequences of the polymerase gene were
aligned with published coronavirus sequences, using
CLUSTAL W for Unix (version 1.7).
From: Ksiazek et al. A Novel Coronavirus Associated with Severe
Acute Respiratory Syndrome
NEJM 348:1953-1966, May 15, 2003
Writing methods:
passive voice and jargon
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The Scientific Manuscript
Results
Results
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The Scientific Manuscript
Results
Results are different from data!
Results=the meaning of the data
Most data belong in figures and tables
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The Scientific Manuscript
Results
Results:
•Report results pertinent to the main question asked
•Summarize the data (big picture); report trends
•Cite figures or tables that present supporting data
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The Scientific Manuscript
Results
Does it belong in the text or in a table or figure?
*text is used to point out simple relationships and describe trends
Examples:
“Over the course of treatment, topiramate was significantly more
effective than placebo at improving drinking outcomes on drinks
per day, drinks per drinking day, percentage of heavy drinking
days, percentage of days abstinent, and log plasma -glutamyl
transferase ratio (table 3).”
“The total suicide rate for Australian men and women did not
change between 1991 and 2000 because marked decreases in older
men and women (table 1) were offset by increases in younger
adults, especially younger men.7”
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The Scientific Manuscript
Results
Hints:
•Use subheadings
•Include negative and control results
•Give a clear idea of the magnitude of a response or a
difference by reporting percent change or the percentage of
difference rather than by quoting exact data
•Reserve the term “significant” for statistically significant
•Do not discuss rationale for statistical analyses
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The Scientific Manuscript
Writing Results: tense
Use past tense, except to talk about how data are presented in the paper.
e.g.:
We found that…
Women were more likely to…
Men smoked more cigarettes than…
BUT:
Figure 1 shows…
Table 1 displays…
The data suggest
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The Scientific Manuscript
Writing Results: tense
Example:
Information was available for 7766 current cigarette smokers. Of these,
1216 (16%) were classified as hardcore smokers. Table 1 gives
characteristics of all the smokers. The most striking difference was that
hardcore smokers were about 10 years older on average and tended to be
more dependent on tobacco. Significantly more hardcore smokers had
manual occupations, lived in rented accommodation, and had completed
their full time education by the age of 16 years. There was no difference
by sex.
FROM:
Jarvis et al. Prevalence of hardcore smoking in England, and associated attitudes and
beliefs: cross sectional study BMJ 2003;326:1061 (17 May)
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The Scientific Manuscript
Writing Results: active voice
Use active voice
-since you can talk about the subjects of your experiments,
“we” can be used sparingly while maintaining the active voice.
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The Scientific Manuscript
Writing Results: active voice
Comparison with Californian estimates
Using the same definition of hardcore smoking as adopted in the
Californian study, we found a prevalence of 17% across all age groups
and 19% among smokers aged 26 compared with a figure of 5% for this
group in the US study. When we added the Californian requirement of
15 cigarettes a day to our criteria we found a prevalence of 10% among
smokers aged 26, still twice the prevalence in California
FROM:
Jarvis et al. Prevalence of hardcore smoking in England, and associated attitudes and
beliefs: cross sectional study BMJ 2003;326:1061 (17 May)
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The Scientific Manuscript
Writing Results: active voice
Differences in attitudes and beliefs by level of dependence
To test whether it was appropriate to exclude a measure of cigarette
dependence from our criteria for defining hardcore smoking, we
compared attitudes and beliefs by dependence in hardcore and other
smokers (table 4). For most items, beliefs were similar in low and high
dependence hardcore smokers but strikingly different from those of other
smokers. For example, almost 60% of both low and high dependency
non-hardcore smokers agreed that improved health would be a major
benefit from quitting whereas among hardcore smokers only 27% of low
dependency and 32% of high dependency smokers agreed. Similar
differentiation in beliefs by hardcore smoking status, but not dependence
level, emerged for other items, especially those related to health.
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The Scientific Manuscript
Tables and Figures
Tables and Figures
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The Scientific Manuscript
Tables and Figures
Editors (and readers) look first (and maybe
only) at titles, abstracts, and Tables and
Figures!
Like the abstract, figures and tables should
stand alone and tell a complete story.
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The Scientific Manuscript
Tables
Tables
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The Scientific Manuscript
Table Titles and Footnotes
Titles:
•Identify the specific topic or point of the table
•Use the same key terms in the title, the column headings, and the
text of the paper
•Keep it brief
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The Scientific Manuscript
Table Titles and Footnotes
Footnotes:
•Use superscript symbols to identify footnotes, according to
journal guidelines:
•A standard series is: *, †,‡,¶,#,**,††, etc.
•Use footnotes to explain statistically significant differences
•E.g., *p<.01 vs. control by ANOVA
•Use footnotes to explain experimental details or abbreviations
•E.g., EDI is the Eating Disorder Inventory (reference)
•Amenorrhea was defined as 0-3 periods per year
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The Scientific Manuscript
Table Formats
Format:
Model your tables from already published tables! Don’t
re-invent the wheel!!
•Use three horizontal lines: one above the column headings, one
below the column heading, and one below the data
•Use a short horizontal line to group subheadings under a
heading
•Follow journal guidelines RE:
•roman or arabic numbers;
•centered or flush left table number, title, column, headings, and data;
•capital letters and italics;
•the placement of footnotes;
•the type of footnote symbols1/27/2024
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Tables: baseline, descriptive data
Table 1. Base-Line Characteristics of the Women Who Underwent Radical Mastecto
and Those Who Underwent Breast-Conserving Therapy.
Veronesi et al. Twenty-Year Follow-up of a Randomized Study Comparing Breast-Conserving Surgery with Radical Mastectomy for Early Breast
Cancer NEJM 347:1227-1232; October 17, 2002
Three
horizontal
lines
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The Scientific Manuscript
Figures
Three varieties of Figures:
1. Primary evidence
• electron micrographs, gels, photographs, etc.
• indicates data quality
2. Graphs
• line graphs, bar graphs, scatter plots, histograms, boxplots, etc.
3. Drawings and diagrams
• illustrate experimental set-up
• indicate flow of experiments or participants
• indicate relationships or cause and effect or a cycle
• give a hypothetical model
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The Scientific Manuscript
Figure Legends
**Allows the figure to stand alone.
Contains:
1. Brief title
2. Experimental details
3. Definitions of symbols or line/bar patterns
4. Statistical information
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The Scientific Manuscript
Figures
Graphs
• line graphs
• scatter plots
• bar graphs
• individual-value bar graphs
• histograms
• box plots
• relative risks
• survival curves
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The Scientific Manuscript
Figures
Graphs
• line graphs
*Used to show trends over time or age
(can display group means or individuals)
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85
The Scientific Manuscript
Figures
Graphs
• bar graphs
*Used to compare groups at one time point
*Tells a quick visual story
1/27/2024
86
The Scientific Manuscript
Figures
Graphs
• scatter plots
*Used to show relationships between two variables (particularly
linear correlation)
*Allows reader to see individual data points=more information!
1/27/2024
87
The Scientific Manuscript
Figures
Graphs
•Confidence intervals/relative risks
•To show dose-response of a protective or harmful factor
1/27/2024
88
The Scientific Manuscript
Acknowledgements
• Funding sources
• Contributors who did not get authorship (e.g. offered
materials, advice or consultation that was not significant
enough to merit authorship).
1/27/2024
89
The Scientific Manuscript
References
• Use a computerized bibliographic program.
• Follow journal guidelines (may request alphabetical listing
or order of appearance in the text).
• Follow standard abbreviations (can be found online).
• Some journals limit number of references allowed.
1/27/2024
90
Steps in Preparing a
Presentation
91 1/27/2024
Planning Your Presentation
 Preparing a presentation can be an
overwhelming experience if you allow it to
be one.
 The strategies and steps below are
provided to help you break down what you
might view as a large job into smaller,
more manageable tasks.
92 1/27/2024
Step 1: Analyze your audience
 The first step in preparing a presentation
is to learn more about the audience to
whom you'll be speaking.
 It's a good idea to obtain some information
on the backgrounds, values, and interests
of your audience so that you understand
what the audience members might expect
from your presentation.
93 1/27/2024
Step 2: Select a topic
 Next, if possible select a topic that is of
interest to the audience and to you.
 It will be much easier to deliver a
presentation that the audience finds
relevant, and more enjoyable to research
a topic that is of interest to you.
94 1/27/2024
Step 3: Define the objective of
the presentation
 Once you have selected a topic, write the objective
of the presentation in a single concise statement.
 The objective needs to specify exactly what you
want your audience to learn from your presentation.
 Base the objective and the level of the content on
the amount of time you have for the presentation
and the background knowledge of the audience.
95 1/27/2024
Preparing the Content of Your Presentation
Step 4: Prepare the body of the presentation
 The body of the presentation is where you present
your ideas. To present your ideas convincingly, you
will need to illustrate and support them.
 Strategies to help you do this include the following:
 Present data and facts
 Read quotes from experts
 Relate personal experiences
 Provide vivid descriptions
 And remember, as you plan the body of your
presentation it's important to provide variety. Listeners
may quickly become bored by lots of facts or they may
tire of hearing story after story.
96
1/27/2024
Step 5: Prepare the
introduction and conclusion
 Once you've prepared the body of the presentation, decide
how you will begin and end the talk.
 Make sure the introduction captures the attention of your
audience and the conclusion summarizes and reiterates your
important points. In other words, "Tell them what you're going
to tell them. Tell them. Then, tell them what you told them.“
 During the opening of your presentation, it's important to
attract the audience's attention and build their interest. If you
don't, listeners will turn their attention elsewhere and you'll
have a difficult time getting it back. Strategies that you can use
include the following:
97 1/27/2024
 Make the introduction relevant to the listeners'
goals, values, and needs
 Ask questions to stimulate thinking
 Share a personal experience
 Begin with a joke or humorous story
 Project a cartoon or colorful visual
 Make a stimulating or inspirational statement
 Give a unique demonstration

98 1/27/2024
 During the opening you want to clearly present your topic and
the purpose of your presentation.
 Clearly articulating the topic and purpose will help the listeners
focus on and easily follow your main ideas.
 During the conclusion of your presentation, reinforce the
main ideas you communicated.
 Remember that listeners won't remember your entire
presentation, only the main ideas. By reinforcing and reviewing
the main ideas, you help the audience remember them.
99 1/27/2024
Practicing and Delivering
Step 6: Practice delivering the presentation
 Most people spend hours preparing a presentation but very
little time practicing it. When you practice your presentation,
you can reduce the number of times you utter words and
phrases like, "um," "well," and "you know." These habits can
easily diminish a speaker's credibility. You can also fine-tune
your content to be sure you make your most important points in
the time alloted.
 In addition to planning the content of your presentation, you
need to give advanced thought to how you want to deliver it.
 To help you decide, read the advantages and disadvantages of
the four delivery methods described below.
100 1/27/2024
Speaking from Memory
 A distinct advantage of speaking from memory is your
ability to speak to the audience without relying on notes
or a script.
 This allows you the flexibility to move away from the
podium and to maintain eye contact with the audience.
However, speaking from memory has disadvantages,
too.
 Presentations from memory often sound rehearsed and
the possibility exists that you'll forget an important point,
present information that's inaccurate, or completely lose
your train of thought.
 If you decide to deliver your presentation from memory,
have notes handy to jog your memory just in case!
101 1/27/2024
Speaking from Notes
 Many people like to speak from notes. Typically these
notes are either on cards or paper in outline form and
contain key ideas and information.
 If you are using an electronic presentation tool, you may
be able to include your notes in the presentation itself.
The benefit of delivering a presentation from notes is
that you sound natural rather than rehearsed and you
can still maintain relatively good eye contact with the
audience.
 The down side is that you might not express your key
ideas and thoughts as well as you may have liked had
you planned your exact words in advance.
102 1/27/2024
Speaking from Text
 Speaking from text involves writing your speech out,
word for word, then basically reading from the text.
 As with speaking from memory, an advantage of this
method is that you plan, in advance, exactly what you're
going to say and how you're going to say it.
 A disadvantage is that you might appear to the audience
to be stiff or rehearsed. You will need to make frequent
eye contact and speak with expression to maintain the
audience's interest.
103 1/27/2024
Using a Combination of Methods
 You may find the best method to be a combination of all
three.
 For instance, experts suggest you memorize the first and last
ten minutes of your talk so that you can speak flawlessly and
without notes.
 Notes may be suitable for segments of your presentation that
you know very well, for example, relating a personal story.
 Finally, speaking from a text might be appropriate when you
have quotes or other important points that you want to make
sure you communicate accurately and completely.
104 1/27/2024
ORAL PRESENTATION
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POSTER PRESENTATION
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132
PLAGIARISM AND HOW
TO AVOID IT
133 1/27/2024
This session
What is plagiarism?
Why is plagiarism a bad thing?
What happens to plagiarists?
Can you spot plagiarism?
How can plagiarism be avoided?
134 1/27/2024
What is plagiarism?
135
1/27/2024
What is plagiarism? (continued)
136 1/27/2024
Why is plagiarism a bad thing?
1. Because it infringes academic ethics and academic norms
2. Because it is a form of theft and a type of fraud
3. Because plagiarists ultimately cheat themselves
4. Because plagiarists cheat their fellow students
5. Because plagiarism reflects incompetence
137 1/27/2024
What happens to plagiarists?
138 1/27/2024
Can you spot plagiarism?
Consider the following
extract …
139 1/27/2024
At the beginning, at any rate, the idea of sovereignty
was the idea that there is a final and absolute political
authority in the political community; and everything
that needs to be added to complete the definition is
added if this statement is continued in the following
words: “and no final and absolute authority exists
elsewhere”.
F.H Hinsley Sovereignty (second edition), Cambridge:
Cambridge University Press, 1986, pp.25-6
140 1/27/2024
WHICH OF THE
FOLLOWING FIVE CASES
IS/ARE PLAGIARISM?
141 1/27/2024
1
142 1/27/2024
2
143 1/27/2024
3
144 1/27/2024
4
145 1/27/2024
5
146 1/27/2024
So how can plagiarism be avoided?
A prior question …
Why do students plagiarise?
147 1/27/2024
4 commonly cited reasons
1. The pressures of
workload
The importance of developing
time management skills
2. Pressures to
succeed
148 1/27/2024
3. Poor understanding of the
nature of plagiarism
confusion ‘cultural’ factors
respect for
seniority
What goes on
in other
walks of life
149 1/27/2024
4. Because its easy!
150 1/27/2024
Avoiding Plagiarism Through
Good Scholarly Practice….
Making Sure You Are Safe …
151 1/27/2024
When quoting directly
 Keep the person’s name near the quote in your notes,
and in your paper
 Select those direct quotes that make the most impact
in your paper -- too many direct quotes may lessen
your credibility and interfere with your style
 Mention the person’s name either at the beginning of
the quote, in the middle, or at the end
 Put quotation marks around the text that you are
quoting
 Indicate added phrases in brackets ([ ]) and omitted
text with ellipses (. . .)
 Ensure you note exact page numbers in the reference
152 1/27/2024
When quoting indirectly
 Keep the person’s name near the text in your notes,
and in your paper
 Rewrite the key ideas using different words and
sentence structures than the original text
 Mention the person’s name either at the beginning of
the information, or in the middle, or at that end
 Double check to make sure that your words and
sentence structures are different than the original
text
 Ensure you note exact page numbers in the reference
153 1/27/2024
When paraphrasing and summarizing
Action during the writing process
 First, write your paraphrase and summary without looking at the
original text, so you rely only on your memory.
 Next, check your version with the original for content, accuracy,
and mistakenly borrowed phrases
Appearance on the finished product
 Begin your summary with a statement giving credit to the
source: According to Jonathan Kozol, ...
 Put any unique words or phrases that you cannot change, or
do not want to change, in quotation marks: ... "savage
inequalities" exist throughout our educational system (Kozol
1992: 1).
 Ensure you note exact page numbers in the reference
154 1/27/2024
When researching and note-
taking
Action during the writing process
 Mark everything that is someone else’s words with a
big Q (for quote) or with big quotation marks
 Indicate in your notes which ideas are taken from
sources (S) and which are your own insights (ME)
 Record all of the relevant documentation information
in your notes
 Ensure you note exact page numbers in the
reference
155 1/27/2024
A few tips: Good Scholarly Practice
• Avoid copying when you take notes; use your own
words/ideas
•When taking notes, make sure you write down the full
reference of the source, INCLUDING PAGE NUMBERS
• Keep track of citations, full references, page numbers,
quotations
• Write first drafts without notes
• When in doubt CITE!
• Take advice
156 1/27/2024
Ethics
 What are ethics?
 What are common
ethical issues that
seem to surface in
research?
 When should ethical
issues be considered?
157
1/27/2024
Ethics
 Ethics: principles for guiding decision
making and reconciling conflicting values
 People may disagree on ‘ethics’ because it is
based on people's personal value systems
 What one person considers to be good or right
may be considered bad or wrong by another
person
158 1/27/2024
Major approaches to ethics
 Deontological Approach
 This approach states that we should identify and use a Universal code
when making ethical decisions
 We should come up with a system of rules to guide our behavior and
stick by it.
 Example
 If you’re a Hindu you might believe that it’s wrong to eat beef; this rule would
be part of your deontology. If you thought it was wrong for anyone to eat
beef, you’d be a deontological universalist.
159 1/27/2024
 Ethical skepticism
 This is the relativist viewpoint, stating
that ethical standards are not universal
but are relative to one's particular
culture and time.
160 1/27/2024
 Utilitarianism
 This is a very practical viewpoint, stating
that decisions about the ethics of a
study should depend on the balance of
the consequences and benefits for the
research participants and the larger
society.
161 1/27/2024
 The utilitarian approach is used by most
people in academia (such as Institutional
Review Boards).
 "Do the potential benefits outweigh the
risks associated with this research?"
162 1/27/2024
Ethical Concerns to the Research
Community
1. The relationship between society
and science.
 Many research ideas come from areas
considered important in society.
 The federal government and other
funding agencies use grants to affect
the areas researchers choose to
examine.
163 1/27/2024
2. Professional issues.
 The primary ethical concern here is fraudulent activity by scientists.
Cheating or lying are never defensible.
 Two related issues are partial publication(publishing several articles
from the data collected in one large study) and duplicate publication
(publishing the same results in more than one publication).
 Partial publication is usually not unethical for large research studies
where partial reports of data are likely.
 Duplicate publication is sometimes acceptable when the results are
being reported to different audiences in publications tailored to those
particular audiences.
164 1/27/2024
3. Treatment of research participants.
 This is probably the most fundamental
ethical issue.
 It involves insuring that research
participants are not harmed physically
or psychologically.
165 1/27/2024
Ethical Guidelines for Research with Humans
 One set of guidelines specifically developed
to guide research conducted by educational
researchers is the AERA Guidelines.
 The AERA is the largest professional
association in the field of education, and is
also known as the American Educational
Research Association.
166 1/27/2024
Informed Consent
 This is the process of providing the research
participants with information enables them to make
an informed decision as to whether they want to
participate in the research study.
 State the purpose of the research and describe the procedures to be followed.
 Describe any potential risks or discomforts the participant may encounter.
 Describe any potential benefits from participation.
 Describe extant to which results will be kept confidential.
 Give a list of names the participants may contact with any questions they have.
 State that participant is voluntary and that they are free to withdraw from the
study at any time.
167 1/27/2024
Informed Consent with Minors as
Research Participants
 Consent must be obtained from parents
or guardians.
 Assent must also be obtained from
minors who are old enough or have
enough intellectual capacity to say they
are willing to participate.
168 1/27/2024
Deception
 Providing false information to the participant about the nature
and/or purpose of the study
 It is discouraged by the AERA, but not disallowed in all cases.
 Sometimes deception is required in order to conduct a valid research study. The
researcher must justify the use of deception.
 If deception is used the following are very important:
 Debriefing is an interview with the research participant providing an opportunity
for the experimenter to reveal deceptive aspects of the study and for the
participant to have any questions about the study answered.
 Dehoaxing: informing the participant about deceptive aspects of the
research study
 Desensitizing: eliminating any stress or other undesirable feelings the study
may have created
169 1/27/2024
Freedom to Withdraw
 Participants must be informed that they are
free to withdraw from the study at any time
without penalty.
 If you have a power relationship with the
participants you must be extra careful to make
sure that they really do feel free to withdraw.
170 1/27/2024
Protection from Mental and Physical Harm
 This is the most fundamental ethical issue
confronting the researcher.
 Educational research generally poses
minimal risk to participants.
171 1/27/2024
Economic Regulation of Research
 Economic regulation is the issue of who
sponsors your research as well as how much
money you get.
 It's the ethical duty of a researcher to get their
results published somewhere. This is called
dissemination of your research, and it requires
that you find the most appropriate and scholarly
outlet that you can.
172 1/27/2024
Political Regulation of Research
 Historically, governments have had to put serious
restrictions on researchers. In fact, the origin of codes of
research ethics can be traced to the NUREMBERG
CODE, a list of rules established by a military tribunal on
Nazi war crimes during World War II. The principles
outlined in the Nuremberg Code include:
 Voluntary consent
 Avoidance of unnecessary suffering
 Avoidance of accidental death or disability
 Termination of research if harm is likely
 Experiments should be conducted by highly qualified people
 Results should be for the good of society and unattainable by any
other means
173 1/27/2024
 The Nuremberg Code was followed by the 1948 U.N. Declaration of
Human Rights and the 1964 Helsinki accord.
 In 1971 (and revised in 1981), the U.S. government initiated guidelines
for all federally funded research. Most federal agencies followed the lead
of HEW (now HHS) because this list of rules could be applied generically
to both medical and nonmedical research. The HEW GUIDELINES were:
 Subjects should be given a fair explanation of the purpose and procedures of the research
 Subjects should be given a description of any reasonable risks or discomforts expected
 Subjects should be told of any possible benefits to be obtained by participating
 Researchers should disclose any alternative procedures that might be advantageous to the
subject
 Researchers should offer to answer any questions subjects may have during the research
 Subjects should be told they are free to withdraw and discontinue participation at any time
174 1/27/2024
 One of the outcomes of the HEW guidelines was the
establishment of INSTITUTIONAL REVIEW BOARDS
(IRBs) at colleges and universities across America. At
first, IRBs were seen as a hindrance on academic
freedom by faculty researchers, but they came to be
accepted, especially after 1981 when the revised HHS
guidelines exempted most social science and criminal
justice research from full review by creating a category
of "expedited" review.
175 1/27/2024
Institutional Review Board
 This is a board consisting of professionals and lay people who review
research proposals to insure that the researcher will adhere to ethical
standards in the conduct of the research.
 Researchers must submit a Research Protocol to the IRB for review
 Three of the most important categories of review are exempt studies,
expedited review, and full board review
 Much educational research falls in the exempt category: being exempt
from certain requirements and full committee review because the study
involves no or minimal risk
 Studies with children, prisoners, and fetal participants are never exempt
 Even if your study ultimately falls in the exempt category, it is still essential
that you follow the ethical guidelines
176 1/27/2024
There are three ways, and three ways only, to
encourage participation ethically (Senese 1997):
 Anonymity: Promise and keep your promises of anonymity. After
identifying your sampling frame, try to forget about taking names or
any other unique identifiers. Reassure people that you won't go to the
media. Fill them in on what journal outlet you have planned.
 Confidentiality: This is what you should promise if you can't keep
anonymity. In other words, use confidentiality if you can't guarantee
anonymity. It requires that you guarantee that no one will be
individually identifiable in any way by you, that all your tables, reports,
and publications will only discuss findings in the aggregate.
 Informed Consent: Be honest and fair with your subjects. Tell them
everything they want to know about your research. Be aware of any
hidden power differentials that might be pressuring them to
participate.
177 1/27/2024

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  • 1. Principles of Effective Writing 1 1/27/2024
  • 2. Principles of Effective Writing  "In science, the credit goes to the man who convinces the world, not to the man to whom the idea first occurs." --Sir William Osler 2 1/27/2024
  • 3. Principles of Effective Writing  "Writing is an art. But when it is writing to inform it comes close to being a science as well."  --Robert Gunning,The Technique of Clear Writing 1/27/2024 3
  • 4. Principles of Effective Writing  Introduction  What makes good writing?  What does it take to be a good writer? 1/27/2024 4
  • 5. Principles of Effective Writing  What makes good writing?  Good writing communicates an idea clearly and effectively.  Good writing is elegant and stylish. Takes time, revision, and a good editor! Takes time having something to say and clear thinking. 1/27/2024 5
  • 6. Principles of Effective Writing What makes a good writer (outside of poets, maybe):  Having something to say.  Logical and clear thinking.  A few simple, learnable rules of style (the tools we’ll learn in this class). Take home message: Writing to inform is a craft, not an art. Clear, effective writing can be learned! 1/27/2024 6
  • 7. Principles of Effective Writing  Clear writing starts with clear thinking. 1/27/2024 7
  • 8. Principles of Effective Writing Before you start writing, ask: “What am I trying to say?”  When you finish writing, ask: “Have I said it?” 1/27/2024 8
  • 9. Principles of Effective Writing Words • Reduce dead weight words and phrases • Get rid of jargon and repetition “Verbose is not a synonym for literary.” 1/27/2024 9
  • 10. Principles of Effective Writing Examples: “I would like to assert that the author should be considered to be a buffoon.”  “The author is a buffoon.” 1/27/2024 10
  • 11. Principles of Effective Writing “The expected prevalence of mental retardation, based on the assumption of a normal distribution of intelligence in the population, is stated to be theoretically about 2.5%.” Examples: 1/27/2024 11
  • 12. Principles of Effective Writing “The expected prevalence of mental retardation, based on the assumption of a normal distribution of intelligence in the population, is stated to be theoretically about 2.5%.” Examples: 1/27/2024 12
  • 13. Principles of Effective Writing “The expected prevalence of mental retardation, based on the assumption of a normal distribution of intelligence in the population, is stated to be theoretically about 2.5%.  “The expected prevalence of mental retardation, if intelligence is normally distributed, is 2.5%.” Examples: 1/27/2024 13
  • 14. Principles of Effective Writing Examples: “This paper provides a review of the basic tenets of cancer biology study design, using as examples studies that illustrate the methodologic challenges or that demonstrate successful solutions to the difficulties inherent in biological research.” s and “This paper reviews cancer biology study design, using examples that illustrate specific challenges and solutions.” 1/27/2024 14
  • 15. Principles of Effective Writing Hunt down and cast out all unneeded words that might slow your reader. 1/27/2024 15
  • 16. Principles of Effective Writing Very, really, quite, basically, generally These words seldom add anything useful. Try the sentence without them and see if it improves. 1/27/2024 16
  • 17. Principles of Effective Writing Watch out for the verb “to be” Often “there are” is extra weight.  There are many students who like writing.  Many students like writing. 1/27/2024 17
  • 18. Principles of Effective Writing Dead weight phrases  in the event that  in the nature of  it has been estimated that  it seems that  the point I am trying to make  what I mean to say is  it may be argued that 1/27/2024 18
  • 19. Principles of Effective Writing Dead weight phrases  for the most part  for the purpose of  in a manner of speaking  in a very real sense  in my opinion  in the case of  in the final analysis 1/27/2024 19
  • 20. Principles of Effective Writing  All three of the the three  Fewer in number fewer  Give rise to cause  In all cases always  In a position to can  In close proximity to near  In order to to Clunky phrase Equivalent 1/27/2024 20
  • 21. Principles of Effective Writing  A majority of most  A number of many  Are of the same opinion agree  At the present moment now  Less frequently occurring rare Clunky phrase Equivalent 1/27/2024 21
  • 22. Principles of Effective Writing  With the possible exception of except  Due to the fact that because  For the purpose of for Beware of Use instead 1/27/2024 22
  • 23. Principles of Effective Writing Wordy Pointed in spite of the fact that although in the event that if new innovations innovations one and the same the same period of four days four days personal opinion opinion shorter/longer in length shorter/longer 1/27/2024 23
  • 24. Principles of Effective Writing Example: “Brain injury incidence shows two peak periods in almost all reports: rates are the highest in young people, and the elderly.” More punch “Brain injury incidence peaks in the young and the elderly.” 1/27/2024 24
  • 25. Principles of Effective Writing MYTH: The passive voice is more objective. It’s not more objective, just more vague. 1/27/2024 25
  • 26. Principles of Effective Writing Passive: To study DNA repair mechanics, this study on hamster cell DNA was carried out. More objective? No! More confusing!  Active: To study DNA repair mechanics, we carried out this study on hamster cell DNA. 1/27/2024 26
  • 27. Principles of Effective Writing Passive: General dysfunction of the immune system has been suggested at the leukocyte level in both animal and human studies. More objective? No! More confusing!  Active: Both human and animal studies suggest that diabetics have general immune dysfunction at the leukocyte level. 1/27/2024 27
  • 28. Principles of Effective Writing The Active Voice is direct, vigorous, natural, and informative. 1/27/2024 28
  • 29. Principles of Effective Writing A note about breaking the rules… Most writing rules are guidelines, not laws, and can be broken when the occasion calls for it. 1/27/2024 29
  • 30. Principles of Effective Writing Eliminate negatives; use positive constructions instead 1/27/2024 30
  • 31. Principles of Effective Writing  He was not often on time  He usually came late.  She did not think that studying writing was a sensible use of one’s time.  She thought studying writing was a waste of time. 1/27/2024 31
  • 32. Principles of Effective Writing  Not honest dishonest  Not important trifling  Does not have lacks  Did not remember forgot  Did not pay attention to ignored  Did not have much confidence distrusted  Did not succeed failed 1/27/2024 32
  • 33. Principles of Effective Writing Lists of ideas (and number lists of ideas) should be written in parallel form. 1/27/2024 33
  • 34. Principles of Effective Writing Parallelism Not Parallel: If you want to be a good doctor, you must study hard, critically think about the medical literature, and you should be a good listener. Parallel: If you want to be a good doctor you must study hard, listen well, and think critically about the medical literature. (imperative, imperative, imperative) Parallel: If you want to be a good doctor, you must be a good student, a good listener, and a critical thinker about the medical literature. (noun, noun, noun) 1/27/2024 34
  • 35. Writing a Scientific Manuscript 1/27/2024 35
  • 36. The Scientific Manuscript The Abstract, Introduction, and Discussion sections 1/27/2024 36
  • 37. The Scientific Manuscript Abstracts Abstracts (ab=out, trahere=pull; “to pull out”)  Overview of the main story  Gives highlights from each section of the paper  Limited length (100-300 words, typically)  Stands on its own  Used, with title, for electronic search engines  Most often, the only part people read 1/27/2024 37
  • 38. The Scientific Manuscript Abstracts Gives: 1. Background 2. Question asked  “We asked whether,” “We hypothesized that,”…etc. 3. Experiment(s) done  Material studied (molecule, cell line, tissue, organ) or the animal or human population studied  The experimental approach or study design and the independent and dependent variables 4. Results found  Key results found  Minimal raw data (prefer summaries) 5. The answer to the question asked 6. Implication, speculation, or recommendation 1/27/2024 38
  • 39. The Scientific Manuscript Abstracts Abstracts may be structured (with subheadings) or free-form. 1/27/2024 39
  • 41. The Scientific Manuscript Introduction Introduction 1. What’s known 2. What’s unknown  limitations and gaps in previous studies 3. Your burning question 4. Your experimental approach 5. Why your experimental approach is new and different and important Critical literature review 1/27/2024 41
  • 42. The Scientific Manuscript Introduction Tell a story:  Write it in plain English, not tech-speak.  Take the reader step by step from what is known to what is unknown. End with your specific question. (KnownUnknownQuestion)  Emphasize what is new and important about your work.  Do not state the answer to the research question.  Do not include results or implications. 1/27/2024 42
  • 43. Introduction  Overweight, Obesity, and Mortality from Cancer in a Prospectively Studied Cohort of U.S. Adults Eugenia E. Calle, Ph.D., Carmen Rodriguez, M.D., M.P.H., Kimberly Walker-Thurmond, B.A., and Michael J. Thun, M.D. 1/27/2024 43
  • 44. The relations between excess body weight and mortality, not only from all causes but also from cardiovascular disease, are well established.1,2,3,4,5,6 Although we have known for some time that excess weight is also an important factor in death from cancer,7 our knowledge of the magnitude of the relation, both for all cancers and for cancers at individual sites, and the public health effect of excess weight in terms of total mortality from cancer is limited. Previous studies have consistently shown associations between adiposity and increased risk of cancers of the endometrium, kidney, gallbladder (in women), breast (in postmenopausal women), and colon (particularly in men).8,9,10,11,12 Adenocarcinoma of the esophagus has been linked to obesity.11,13,14 Data on cancers of the pancreas, prostate, liver, cervix, and ovary and on hematopoietic cancers are scarce or inconsistent.7,8,9,10,11,15,16,17 The lack of consistency may be attributable to the limited number of studies (especially those with prospective cohorts), the limited range and variable categorization of overweight and obesity among studies, bias introduced by reverse causality with respect to smoking- related cancers, and possibly real differences between the effects of overweight and obesity on the incidence of cancer and on the rates of death from some cancers.18,19 We conducted a prospective investigation in a large cohort of U.S. men and women to determine the relations between body-mass index (the weight in kilograms divided by the square of the height in meters) and the risk of death from cancer at specific sites. This cohort has been used previously to examine the association of body-mass index and death from any cause.5 What’s known What’s unknown What’s known What’s unknown Gaps/limitations of previous studies “This study will answer the question with better methods.” 1/27/2024 44
  • 45. The Scientific Manuscript THE DISCUSSION The Discussion is the section that… • Gives you the most freedom • Gives you the most chance to put good writing on display • Is the most challenging to write 1/27/2024 45
  • 46. The Scientific Manuscript The Discussion Follow your rules for good writing! 1/27/2024 46
  • 47. The Scientific Manuscript The Discussion The purpose of the discussion: • Answer the question posed in the Introduction • Support your conclusion with details (yours, others) • Defend your conclusion (acknowledge limits) • Highlight the broader implications of the work i.e., What do my results mean and why should anyone care? 1/27/2024 47
  • 48. The Scientific Manuscript The Discussion The Introduction moved from general to specific. The discussion moves from specific to general. 1/27/2024 48
  • 49. The Scientific Manuscript The Discussion Elements of the typical discussion section… 1/27/2024 49
  • 50. 1. Key finding (answer to the question(s) asked in Intro.) • Supporting explanation, details (lines of evidence) • Possible mechanisms or pathways • Is this finding novel? 2. Key secondary findings 3. Context • Compare your results with other people’s results • Compare your results with existing paradigms • Explain unexpected or surprising findings 4. Strengths and limitations 5. What’s next • Recommended confirmatory studies (“needs to be confirmed”) • Unanswered questions • Future directions 6. The “so what?”: implicate, speculate, recommend • Clinical implications of basic science findings 7. Strong conclusion 1/27/2024 50
  • 51. EXAMPLE: Samaha FF, Iqbal N, Seshadri P, et al. A low-carbohydrate as compared with a low-fat diet in severe obesity. N Engl J Med 2003;348:2074-2081. INTRODUCTION The differences in health benefits between a carbohydrate- restricted diet and a calorie- and fat-restricted diet are of considerable public interest. However, there is concern that a carbohydrate-restricted diet will adversely affect serum lipid concentrations.1 Previous studies demonstrating that healthy volunteers following a low-carbohydrate diet can lose weight have involved few subjects, and few used a comparison group that followed consensus guidelines for weight loss.2,3 The reported effects of a carbohydrate-restricted diet on risk factors for atherosclerosis have varied.2,3,4 We performed a study designed to test the hypothesis that severely obese subjects with a high prevalence of diabetes or the metabolic syndrome [a] would have a greater weight loss, [b] without detrimental effects on risk factors for atherosclerosis, while on a carbohydrate-restricted (low-carbohydrate) diet than on a calorie- and fat-restricted (low-fat) diet. 1/27/2024 51
  • 52. The Scientific Manuscript The Discussion 1. We found that severely obese subjects with a high prevalence of diabetes and the metabolic syndrome lost more weight in a six-month period on a carbohydrate- restricted diet than on a fat- and calorie-restricted diet. [answer to a] The greater weight loss in the low- carbohydrate group suggests a greater reduction in overall caloric intake, rather than a direct effect of macronutrient composition. [mechanisms] However, the explanation for this difference is not clear. Subjects in this group may have experienced greater satiety on a diet with liberal proportions of protein and fat. However, other potential explanations include the simplicity of the diet and improved compliance related to the novelty of the diet. [possible mechanisms/unanswered questions] 1/27/2024 52
  • 53. The Scientific Manuscript The Discussion 2. Subjects in the low-carbohydrate group had greater decreases in triglyceride levels than did subjects in the low-fat group; nondiabetic subjects on the low- carbohydrate diet had greater increases in insulin sensitivity, and subjects with diabetes on this diet had a greater improvement in glycemic control. No adverse effects on other serum lipid levels were observed. [answer to b] Most studies suggest that lowering triglyceride levels has an overall cardiovascular benefit.14,15,16 Insulin resistance promotes such atherosclerotic processes as inflammation,17 decreased size of low-density lipoprotein particles,18 and endothelial dysfunction.19 Impaired glycemic control in subjects with other features of the metabolic syndrome markedly increases the risk of coronary artery disease.20 As expected, we found that the amount of weight lost had a significant effect on the degree of improvement in these metabolic factors. [comparison to previous studies and paradigms] However, even after adjustment for the differences in weight loss between the groups, assignment to the low-carbohydrate diet predicted greater improvements in triglyceride levels and insulin sensitivity. [unexpected] Subjects who lost more than 5 percent of their base-line weight on a carbohydrate-restricted diet had greater decreases in triglyceride levels than those who lost a similar amount of weight while following a calorie- and fat-restricted diet. [supporting details] 1/27/2024 53
  • 54. The Scientific Manuscript The Discussion 3. There was a consistent trend across weight-loss strata toward a greater increase in insulin sensitivity in the low-carbohydrate group, although these changes were small and were not significant within each stratum. [supporting details: dose/response] Although greater weight loss could not entirely account for the greater decrease in triglyceride levels and increase in insulin sensitivity in the low-carbohydrate group, we cannot definitively conclude that carbohydrate restriction alone accounted for this independent effect. [mechanisms] Other uncontrolled variables, such as the types of carbohydrates selected (e.g., the proportion of complex carbohydrates or the ratio of carbohydrate to fiber), or other unknown variables may have contributed to this effect. In addition, more precise measurements of insulin sensitivity than we used would be needed to confirm this effect of a carbohydrate-restricted diet. [limitations/future studies] 1/27/2024 54
  • 55. The Scientific Manuscript The Discussion 4. Many of our subjects were taking lipid-lowering medications and hypoglycemic agents. Although enrolling these subjects introduced confounding variables, it allowed the inclusion of subjects with the obesity-related medical disorders typically encountered in clinical practice. Analyses from which these subjects were excluded still revealed greater improvements in insulin sensitivity and triglyceride levels on a carbohydrate-restricted diet than on a fat- and calorie-restricted diet. [limitations and how they were addressed] 1/27/2024 55
  • 56. The Scientific Manuscript The Discussion 5. Our study included a high proportion of black subjects, a group previously underrepresented in lifestyle- modification studies. [strength] As compared with the white subjects, the black subjects had a smaller overall weight loss. Future studies should explore whether greater weight loss in this population can be achieved by more effective incorporation of culturally sensitive dietary counseling. [future directions] 6. The high dropout rate in our study occurred very early and affected our findings. The very early dropout of these subjects may indicate that attrition most closely reflected base-line motivation to lose weight, rather than a response to the dietary intervention itself. [limitation] 1/27/2024 56
  • 57. The Scientific Manuscript The Discussion 7. Taken together, our findings demonstrate that severely obese subjects with a high prevalence of diabetes and the metabolic syndrome lost more weight during six months on a carbohydrate-restricted diet than on a calorie- and fat- restricted diet. The carbohydrate-restricted diet led to greater improvements in insulin sensitivity that were independent of weight loss and a greater reduction in triglyceride levels in subjects who lost more than 5 percent of their base-line weight. [conclusion; restate answers to a and b] These findings must be interpreted with caution, however, since the magnitude of the overall weight loss relative to our subjects' severe obesity was small, and it is unclear whether these benefits of a carbohydrate-restricted diet extend beyond six months. Furthermore, the high dropout rate and the small overall weight loss demonstrate that dietary adherence was relatively low in both diet groups. [big picture] This study proves a principle and does not provide clinical guidance; given the known benefits of fat restriction, future studies evaluating long-term cardiovascular outcomes are needed before a carbohydrate-restricted diet can be endorsed. [take-home message] 1/27/2024 57
  • 58. The Scientific Manuscript The Discussion: verb tense Verb Tenses (active!): Past, when referring to study details, results, analyses, and background research: • We found that • They lost more weight than • Subjects may have experienced • Miller et al. found Present, when talking about what the data suggest … The greater weight loss suggests The explanation for this difference is not clear. Potential explanations include 1/27/2024 58
  • 59. The Discussion: 1. The answer to the key question asked 2. What’s new 3. The context • How your results fit into, contradict, or add to what’s known or believed 4. Strengths and limits of the study 5. The “so what?”: implicate, speculate, recommend 6. Overall conclusion 7. Powerful finish The Scientific Manuscript Discussion 1/27/2024 59
  • 60. The Scientific Manuscript Methods and Materials, Results, Tables and Figures 1/27/2024 60
  • 62. The Scientific Manuscript Methods and Materials Materials and Methods Overview: • Give a clear overview of what was done • Give enough information to replicate the study (like a recipe!) • Be complete, but minimize complexity! 1. Break into smaller sections with subheads 2. Cite a reference for commonly used methods 3. Display in a flow diagram where possible • You may use jargon and the passive voice more liberally in the M&M section 1/27/2024 62
  • 63. Report methods in past tense (“we measured”), But use present tense to describe how data are presented in the paper Writing methods: verb tenses 1/27/2024 63
  • 64. For sequencing, amplicons were purified with ExoSAP-Codes. The partial nucleotide sequences of the polymerase gene were aligned with published coronavirus sequences, using CLUSTAL W for Unix (version 1.7). From: Ksiazek et al. A Novel Coronavirus Associated with Severe Acute Respiratory Syndrome NEJM 348:1953-1966, May 15, 2003 Writing methods: passive voice and jargon 1/27/2024 64
  • 66. The Scientific Manuscript Results Results are different from data! Results=the meaning of the data Most data belong in figures and tables 1/27/2024 66
  • 67. The Scientific Manuscript Results Results: •Report results pertinent to the main question asked •Summarize the data (big picture); report trends •Cite figures or tables that present supporting data 1/27/2024 67
  • 68. The Scientific Manuscript Results Does it belong in the text or in a table or figure? *text is used to point out simple relationships and describe trends Examples: “Over the course of treatment, topiramate was significantly more effective than placebo at improving drinking outcomes on drinks per day, drinks per drinking day, percentage of heavy drinking days, percentage of days abstinent, and log plasma -glutamyl transferase ratio (table 3).” “The total suicide rate for Australian men and women did not change between 1991 and 2000 because marked decreases in older men and women (table 1) were offset by increases in younger adults, especially younger men.7” 1/27/2024 68
  • 69. The Scientific Manuscript Results Hints: •Use subheadings •Include negative and control results •Give a clear idea of the magnitude of a response or a difference by reporting percent change or the percentage of difference rather than by quoting exact data •Reserve the term “significant” for statistically significant •Do not discuss rationale for statistical analyses 1/27/2024 69
  • 70. The Scientific Manuscript Writing Results: tense Use past tense, except to talk about how data are presented in the paper. e.g.: We found that… Women were more likely to… Men smoked more cigarettes than… BUT: Figure 1 shows… Table 1 displays… The data suggest 1/27/2024 70
  • 71. The Scientific Manuscript Writing Results: tense Example: Information was available for 7766 current cigarette smokers. Of these, 1216 (16%) were classified as hardcore smokers. Table 1 gives characteristics of all the smokers. The most striking difference was that hardcore smokers were about 10 years older on average and tended to be more dependent on tobacco. Significantly more hardcore smokers had manual occupations, lived in rented accommodation, and had completed their full time education by the age of 16 years. There was no difference by sex. FROM: Jarvis et al. Prevalence of hardcore smoking in England, and associated attitudes and beliefs: cross sectional study BMJ 2003;326:1061 (17 May) 1/27/2024 71
  • 72. The Scientific Manuscript Writing Results: active voice Use active voice -since you can talk about the subjects of your experiments, “we” can be used sparingly while maintaining the active voice. 1/27/2024 72
  • 73. The Scientific Manuscript Writing Results: active voice Comparison with Californian estimates Using the same definition of hardcore smoking as adopted in the Californian study, we found a prevalence of 17% across all age groups and 19% among smokers aged 26 compared with a figure of 5% for this group in the US study. When we added the Californian requirement of 15 cigarettes a day to our criteria we found a prevalence of 10% among smokers aged 26, still twice the prevalence in California FROM: Jarvis et al. Prevalence of hardcore smoking in England, and associated attitudes and beliefs: cross sectional study BMJ 2003;326:1061 (17 May) 1/27/2024 73
  • 74. The Scientific Manuscript Writing Results: active voice Differences in attitudes and beliefs by level of dependence To test whether it was appropriate to exclude a measure of cigarette dependence from our criteria for defining hardcore smoking, we compared attitudes and beliefs by dependence in hardcore and other smokers (table 4). For most items, beliefs were similar in low and high dependence hardcore smokers but strikingly different from those of other smokers. For example, almost 60% of both low and high dependency non-hardcore smokers agreed that improved health would be a major benefit from quitting whereas among hardcore smokers only 27% of low dependency and 32% of high dependency smokers agreed. Similar differentiation in beliefs by hardcore smoking status, but not dependence level, emerged for other items, especially those related to health. 1/27/2024 74
  • 75. The Scientific Manuscript Tables and Figures Tables and Figures 1/27/2024 75
  • 76. The Scientific Manuscript Tables and Figures Editors (and readers) look first (and maybe only) at titles, abstracts, and Tables and Figures! Like the abstract, figures and tables should stand alone and tell a complete story. 1/27/2024 76
  • 78. The Scientific Manuscript Table Titles and Footnotes Titles: •Identify the specific topic or point of the table •Use the same key terms in the title, the column headings, and the text of the paper •Keep it brief 1/27/2024 78
  • 79. The Scientific Manuscript Table Titles and Footnotes Footnotes: •Use superscript symbols to identify footnotes, according to journal guidelines: •A standard series is: *, †,‡,¶,#,**,††, etc. •Use footnotes to explain statistically significant differences •E.g., *p<.01 vs. control by ANOVA •Use footnotes to explain experimental details or abbreviations •E.g., EDI is the Eating Disorder Inventory (reference) •Amenorrhea was defined as 0-3 periods per year 1/27/2024 79
  • 80. The Scientific Manuscript Table Formats Format: Model your tables from already published tables! Don’t re-invent the wheel!! •Use three horizontal lines: one above the column headings, one below the column heading, and one below the data •Use a short horizontal line to group subheadings under a heading •Follow journal guidelines RE: •roman or arabic numbers; •centered or flush left table number, title, column, headings, and data; •capital letters and italics; •the placement of footnotes; •the type of footnote symbols1/27/2024 80
  • 81. Tables: baseline, descriptive data Table 1. Base-Line Characteristics of the Women Who Underwent Radical Mastecto and Those Who Underwent Breast-Conserving Therapy. Veronesi et al. Twenty-Year Follow-up of a Randomized Study Comparing Breast-Conserving Surgery with Radical Mastectomy for Early Breast Cancer NEJM 347:1227-1232; October 17, 2002 Three horizontal lines 1/27/2024 81
  • 82. The Scientific Manuscript Figures Three varieties of Figures: 1. Primary evidence • electron micrographs, gels, photographs, etc. • indicates data quality 2. Graphs • line graphs, bar graphs, scatter plots, histograms, boxplots, etc. 3. Drawings and diagrams • illustrate experimental set-up • indicate flow of experiments or participants • indicate relationships or cause and effect or a cycle • give a hypothetical model 1/27/2024 82
  • 83. The Scientific Manuscript Figure Legends **Allows the figure to stand alone. Contains: 1. Brief title 2. Experimental details 3. Definitions of symbols or line/bar patterns 4. Statistical information 1/27/2024 83
  • 84. The Scientific Manuscript Figures Graphs • line graphs • scatter plots • bar graphs • individual-value bar graphs • histograms • box plots • relative risks • survival curves 1/27/2024 84
  • 85. The Scientific Manuscript Figures Graphs • line graphs *Used to show trends over time or age (can display group means or individuals) 1/27/2024 85
  • 86. The Scientific Manuscript Figures Graphs • bar graphs *Used to compare groups at one time point *Tells a quick visual story 1/27/2024 86
  • 87. The Scientific Manuscript Figures Graphs • scatter plots *Used to show relationships between two variables (particularly linear correlation) *Allows reader to see individual data points=more information! 1/27/2024 87
  • 88. The Scientific Manuscript Figures Graphs •Confidence intervals/relative risks •To show dose-response of a protective or harmful factor 1/27/2024 88
  • 89. The Scientific Manuscript Acknowledgements • Funding sources • Contributors who did not get authorship (e.g. offered materials, advice or consultation that was not significant enough to merit authorship). 1/27/2024 89
  • 90. The Scientific Manuscript References • Use a computerized bibliographic program. • Follow journal guidelines (may request alphabetical listing or order of appearance in the text). • Follow standard abbreviations (can be found online). • Some journals limit number of references allowed. 1/27/2024 90
  • 91. Steps in Preparing a Presentation 91 1/27/2024
  • 92. Planning Your Presentation  Preparing a presentation can be an overwhelming experience if you allow it to be one.  The strategies and steps below are provided to help you break down what you might view as a large job into smaller, more manageable tasks. 92 1/27/2024
  • 93. Step 1: Analyze your audience  The first step in preparing a presentation is to learn more about the audience to whom you'll be speaking.  It's a good idea to obtain some information on the backgrounds, values, and interests of your audience so that you understand what the audience members might expect from your presentation. 93 1/27/2024
  • 94. Step 2: Select a topic  Next, if possible select a topic that is of interest to the audience and to you.  It will be much easier to deliver a presentation that the audience finds relevant, and more enjoyable to research a topic that is of interest to you. 94 1/27/2024
  • 95. Step 3: Define the objective of the presentation  Once you have selected a topic, write the objective of the presentation in a single concise statement.  The objective needs to specify exactly what you want your audience to learn from your presentation.  Base the objective and the level of the content on the amount of time you have for the presentation and the background knowledge of the audience. 95 1/27/2024
  • 96. Preparing the Content of Your Presentation Step 4: Prepare the body of the presentation  The body of the presentation is where you present your ideas. To present your ideas convincingly, you will need to illustrate and support them.  Strategies to help you do this include the following:  Present data and facts  Read quotes from experts  Relate personal experiences  Provide vivid descriptions  And remember, as you plan the body of your presentation it's important to provide variety. Listeners may quickly become bored by lots of facts or they may tire of hearing story after story. 96 1/27/2024
  • 97. Step 5: Prepare the introduction and conclusion  Once you've prepared the body of the presentation, decide how you will begin and end the talk.  Make sure the introduction captures the attention of your audience and the conclusion summarizes and reiterates your important points. In other words, "Tell them what you're going to tell them. Tell them. Then, tell them what you told them.“  During the opening of your presentation, it's important to attract the audience's attention and build their interest. If you don't, listeners will turn their attention elsewhere and you'll have a difficult time getting it back. Strategies that you can use include the following: 97 1/27/2024
  • 98.  Make the introduction relevant to the listeners' goals, values, and needs  Ask questions to stimulate thinking  Share a personal experience  Begin with a joke or humorous story  Project a cartoon or colorful visual  Make a stimulating or inspirational statement  Give a unique demonstration  98 1/27/2024
  • 99.  During the opening you want to clearly present your topic and the purpose of your presentation.  Clearly articulating the topic and purpose will help the listeners focus on and easily follow your main ideas.  During the conclusion of your presentation, reinforce the main ideas you communicated.  Remember that listeners won't remember your entire presentation, only the main ideas. By reinforcing and reviewing the main ideas, you help the audience remember them. 99 1/27/2024
  • 100. Practicing and Delivering Step 6: Practice delivering the presentation  Most people spend hours preparing a presentation but very little time practicing it. When you practice your presentation, you can reduce the number of times you utter words and phrases like, "um," "well," and "you know." These habits can easily diminish a speaker's credibility. You can also fine-tune your content to be sure you make your most important points in the time alloted.  In addition to planning the content of your presentation, you need to give advanced thought to how you want to deliver it.  To help you decide, read the advantages and disadvantages of the four delivery methods described below. 100 1/27/2024
  • 101. Speaking from Memory  A distinct advantage of speaking from memory is your ability to speak to the audience without relying on notes or a script.  This allows you the flexibility to move away from the podium and to maintain eye contact with the audience. However, speaking from memory has disadvantages, too.  Presentations from memory often sound rehearsed and the possibility exists that you'll forget an important point, present information that's inaccurate, or completely lose your train of thought.  If you decide to deliver your presentation from memory, have notes handy to jog your memory just in case! 101 1/27/2024
  • 102. Speaking from Notes  Many people like to speak from notes. Typically these notes are either on cards or paper in outline form and contain key ideas and information.  If you are using an electronic presentation tool, you may be able to include your notes in the presentation itself. The benefit of delivering a presentation from notes is that you sound natural rather than rehearsed and you can still maintain relatively good eye contact with the audience.  The down side is that you might not express your key ideas and thoughts as well as you may have liked had you planned your exact words in advance. 102 1/27/2024
  • 103. Speaking from Text  Speaking from text involves writing your speech out, word for word, then basically reading from the text.  As with speaking from memory, an advantage of this method is that you plan, in advance, exactly what you're going to say and how you're going to say it.  A disadvantage is that you might appear to the audience to be stiff or rehearsed. You will need to make frequent eye contact and speak with expression to maintain the audience's interest. 103 1/27/2024
  • 104. Using a Combination of Methods  You may find the best method to be a combination of all three.  For instance, experts suggest you memorize the first and last ten minutes of your talk so that you can speak flawlessly and without notes.  Notes may be suitable for segments of your presentation that you know very well, for example, relating a personal story.  Finally, speaking from a text might be appropriate when you have quotes or other important points that you want to make sure you communicate accurately and completely. 104 1/27/2024
  • 133. PLAGIARISM AND HOW TO AVOID IT 133 1/27/2024
  • 134. This session What is plagiarism? Why is plagiarism a bad thing? What happens to plagiarists? Can you spot plagiarism? How can plagiarism be avoided? 134 1/27/2024
  • 136. What is plagiarism? (continued) 136 1/27/2024
  • 137. Why is plagiarism a bad thing? 1. Because it infringes academic ethics and academic norms 2. Because it is a form of theft and a type of fraud 3. Because plagiarists ultimately cheat themselves 4. Because plagiarists cheat their fellow students 5. Because plagiarism reflects incompetence 137 1/27/2024
  • 138. What happens to plagiarists? 138 1/27/2024
  • 139. Can you spot plagiarism? Consider the following extract … 139 1/27/2024
  • 140. At the beginning, at any rate, the idea of sovereignty was the idea that there is a final and absolute political authority in the political community; and everything that needs to be added to complete the definition is added if this statement is continued in the following words: “and no final and absolute authority exists elsewhere”. F.H Hinsley Sovereignty (second edition), Cambridge: Cambridge University Press, 1986, pp.25-6 140 1/27/2024
  • 141. WHICH OF THE FOLLOWING FIVE CASES IS/ARE PLAGIARISM? 141 1/27/2024
  • 147. So how can plagiarism be avoided? A prior question … Why do students plagiarise? 147 1/27/2024
  • 148. 4 commonly cited reasons 1. The pressures of workload The importance of developing time management skills 2. Pressures to succeed 148 1/27/2024
  • 149. 3. Poor understanding of the nature of plagiarism confusion ‘cultural’ factors respect for seniority What goes on in other walks of life 149 1/27/2024
  • 150. 4. Because its easy! 150 1/27/2024
  • 151. Avoiding Plagiarism Through Good Scholarly Practice…. Making Sure You Are Safe … 151 1/27/2024
  • 152. When quoting directly  Keep the person’s name near the quote in your notes, and in your paper  Select those direct quotes that make the most impact in your paper -- too many direct quotes may lessen your credibility and interfere with your style  Mention the person’s name either at the beginning of the quote, in the middle, or at the end  Put quotation marks around the text that you are quoting  Indicate added phrases in brackets ([ ]) and omitted text with ellipses (. . .)  Ensure you note exact page numbers in the reference 152 1/27/2024
  • 153. When quoting indirectly  Keep the person’s name near the text in your notes, and in your paper  Rewrite the key ideas using different words and sentence structures than the original text  Mention the person’s name either at the beginning of the information, or in the middle, or at that end  Double check to make sure that your words and sentence structures are different than the original text  Ensure you note exact page numbers in the reference 153 1/27/2024
  • 154. When paraphrasing and summarizing Action during the writing process  First, write your paraphrase and summary without looking at the original text, so you rely only on your memory.  Next, check your version with the original for content, accuracy, and mistakenly borrowed phrases Appearance on the finished product  Begin your summary with a statement giving credit to the source: According to Jonathan Kozol, ...  Put any unique words or phrases that you cannot change, or do not want to change, in quotation marks: ... "savage inequalities" exist throughout our educational system (Kozol 1992: 1).  Ensure you note exact page numbers in the reference 154 1/27/2024
  • 155. When researching and note- taking Action during the writing process  Mark everything that is someone else’s words with a big Q (for quote) or with big quotation marks  Indicate in your notes which ideas are taken from sources (S) and which are your own insights (ME)  Record all of the relevant documentation information in your notes  Ensure you note exact page numbers in the reference 155 1/27/2024
  • 156. A few tips: Good Scholarly Practice • Avoid copying when you take notes; use your own words/ideas •When taking notes, make sure you write down the full reference of the source, INCLUDING PAGE NUMBERS • Keep track of citations, full references, page numbers, quotations • Write first drafts without notes • When in doubt CITE! • Take advice 156 1/27/2024
  • 157. Ethics  What are ethics?  What are common ethical issues that seem to surface in research?  When should ethical issues be considered? 157 1/27/2024
  • 158. Ethics  Ethics: principles for guiding decision making and reconciling conflicting values  People may disagree on ‘ethics’ because it is based on people's personal value systems  What one person considers to be good or right may be considered bad or wrong by another person 158 1/27/2024
  • 159. Major approaches to ethics  Deontological Approach  This approach states that we should identify and use a Universal code when making ethical decisions  We should come up with a system of rules to guide our behavior and stick by it.  Example  If you’re a Hindu you might believe that it’s wrong to eat beef; this rule would be part of your deontology. If you thought it was wrong for anyone to eat beef, you’d be a deontological universalist. 159 1/27/2024
  • 160.  Ethical skepticism  This is the relativist viewpoint, stating that ethical standards are not universal but are relative to one's particular culture and time. 160 1/27/2024
  • 161.  Utilitarianism  This is a very practical viewpoint, stating that decisions about the ethics of a study should depend on the balance of the consequences and benefits for the research participants and the larger society. 161 1/27/2024
  • 162.  The utilitarian approach is used by most people in academia (such as Institutional Review Boards).  "Do the potential benefits outweigh the risks associated with this research?" 162 1/27/2024
  • 163. Ethical Concerns to the Research Community 1. The relationship between society and science.  Many research ideas come from areas considered important in society.  The federal government and other funding agencies use grants to affect the areas researchers choose to examine. 163 1/27/2024
  • 164. 2. Professional issues.  The primary ethical concern here is fraudulent activity by scientists. Cheating or lying are never defensible.  Two related issues are partial publication(publishing several articles from the data collected in one large study) and duplicate publication (publishing the same results in more than one publication).  Partial publication is usually not unethical for large research studies where partial reports of data are likely.  Duplicate publication is sometimes acceptable when the results are being reported to different audiences in publications tailored to those particular audiences. 164 1/27/2024
  • 165. 3. Treatment of research participants.  This is probably the most fundamental ethical issue.  It involves insuring that research participants are not harmed physically or psychologically. 165 1/27/2024
  • 166. Ethical Guidelines for Research with Humans  One set of guidelines specifically developed to guide research conducted by educational researchers is the AERA Guidelines.  The AERA is the largest professional association in the field of education, and is also known as the American Educational Research Association. 166 1/27/2024
  • 167. Informed Consent  This is the process of providing the research participants with information enables them to make an informed decision as to whether they want to participate in the research study.  State the purpose of the research and describe the procedures to be followed.  Describe any potential risks or discomforts the participant may encounter.  Describe any potential benefits from participation.  Describe extant to which results will be kept confidential.  Give a list of names the participants may contact with any questions they have.  State that participant is voluntary and that they are free to withdraw from the study at any time. 167 1/27/2024
  • 168. Informed Consent with Minors as Research Participants  Consent must be obtained from parents or guardians.  Assent must also be obtained from minors who are old enough or have enough intellectual capacity to say they are willing to participate. 168 1/27/2024
  • 169. Deception  Providing false information to the participant about the nature and/or purpose of the study  It is discouraged by the AERA, but not disallowed in all cases.  Sometimes deception is required in order to conduct a valid research study. The researcher must justify the use of deception.  If deception is used the following are very important:  Debriefing is an interview with the research participant providing an opportunity for the experimenter to reveal deceptive aspects of the study and for the participant to have any questions about the study answered.  Dehoaxing: informing the participant about deceptive aspects of the research study  Desensitizing: eliminating any stress or other undesirable feelings the study may have created 169 1/27/2024
  • 170. Freedom to Withdraw  Participants must be informed that they are free to withdraw from the study at any time without penalty.  If you have a power relationship with the participants you must be extra careful to make sure that they really do feel free to withdraw. 170 1/27/2024
  • 171. Protection from Mental and Physical Harm  This is the most fundamental ethical issue confronting the researcher.  Educational research generally poses minimal risk to participants. 171 1/27/2024
  • 172. Economic Regulation of Research  Economic regulation is the issue of who sponsors your research as well as how much money you get.  It's the ethical duty of a researcher to get their results published somewhere. This is called dissemination of your research, and it requires that you find the most appropriate and scholarly outlet that you can. 172 1/27/2024
  • 173. Political Regulation of Research  Historically, governments have had to put serious restrictions on researchers. In fact, the origin of codes of research ethics can be traced to the NUREMBERG CODE, a list of rules established by a military tribunal on Nazi war crimes during World War II. The principles outlined in the Nuremberg Code include:  Voluntary consent  Avoidance of unnecessary suffering  Avoidance of accidental death or disability  Termination of research if harm is likely  Experiments should be conducted by highly qualified people  Results should be for the good of society and unattainable by any other means 173 1/27/2024
  • 174.  The Nuremberg Code was followed by the 1948 U.N. Declaration of Human Rights and the 1964 Helsinki accord.  In 1971 (and revised in 1981), the U.S. government initiated guidelines for all federally funded research. Most federal agencies followed the lead of HEW (now HHS) because this list of rules could be applied generically to both medical and nonmedical research. The HEW GUIDELINES were:  Subjects should be given a fair explanation of the purpose and procedures of the research  Subjects should be given a description of any reasonable risks or discomforts expected  Subjects should be told of any possible benefits to be obtained by participating  Researchers should disclose any alternative procedures that might be advantageous to the subject  Researchers should offer to answer any questions subjects may have during the research  Subjects should be told they are free to withdraw and discontinue participation at any time 174 1/27/2024
  • 175.  One of the outcomes of the HEW guidelines was the establishment of INSTITUTIONAL REVIEW BOARDS (IRBs) at colleges and universities across America. At first, IRBs were seen as a hindrance on academic freedom by faculty researchers, but they came to be accepted, especially after 1981 when the revised HHS guidelines exempted most social science and criminal justice research from full review by creating a category of "expedited" review. 175 1/27/2024
  • 176. Institutional Review Board  This is a board consisting of professionals and lay people who review research proposals to insure that the researcher will adhere to ethical standards in the conduct of the research.  Researchers must submit a Research Protocol to the IRB for review  Three of the most important categories of review are exempt studies, expedited review, and full board review  Much educational research falls in the exempt category: being exempt from certain requirements and full committee review because the study involves no or minimal risk  Studies with children, prisoners, and fetal participants are never exempt  Even if your study ultimately falls in the exempt category, it is still essential that you follow the ethical guidelines 176 1/27/2024
  • 177. There are three ways, and three ways only, to encourage participation ethically (Senese 1997):  Anonymity: Promise and keep your promises of anonymity. After identifying your sampling frame, try to forget about taking names or any other unique identifiers. Reassure people that you won't go to the media. Fill them in on what journal outlet you have planned.  Confidentiality: This is what you should promise if you can't keep anonymity. In other words, use confidentiality if you can't guarantee anonymity. It requires that you guarantee that no one will be individually identifiable in any way by you, that all your tables, reports, and publications will only discuss findings in the aggregate.  Informed Consent: Be honest and fair with your subjects. Tell them everything they want to know about your research. Be aware of any hidden power differentials that might be pressuring them to participate. 177 1/27/2024