Yajin Chen presented her work on the use of solid-phase epitaxy to create epitaxial complex-oxide interfaces that have promising electronic properties at the APS March Meeting 2019 in Boston, MA. The presented work is a part of a collaborative project with Prof. Charles H. Winter’s group in the Department of Chemistry at Wayne State University. Epitaxial RAlO3/SrTiO3 (R = La, Pr, Nd) oxide interfaces can produce a two-dimensional electron gas (2DEG), but the creation of those interfaces is limited to 2D geometries. Intricate geometries of epitaxial oxide thin films can be created by crystallizing the amorphous layers with thermal heating, which is termed solid-phase epitaxy. Atomic layer deposition (ALD) is employed to deposit the amorphous layers because ALD allows for the conformal deposition of thin films over non-planar surfaces. Prof. Winter’s group successfully developed the growth of amorphous PrAlO3 thin films by ALD. Epitaxial PrAlO3 thin films were achieved on single-crystal (001) SrTiO3 substrates with solid-phase epitaxy through the development of new ALD procedures, by understanding of the crystallization kinetics, and by probing the microstructure and interface structures of the crystallized thin films.
Presented by Peng Zuo at International Conference on Crystal Growth and Epitaxy (ICCGE-19) in Keystone CO, July 28-August 2, 2019.
Solid phase epitaxy (SPE) is a promising approach for expanding the applications of epitaxial complex oxides by providing access to a broader range of compositions and enabling their formation in complex geometries. The SPE of PrAlO3 on SrTiO3 serves as a model system. The interfaces between lanthanide aluminates and SrTiO3 are also of practical interest because these interfaces can host a two-dimensional electron gas. Amorphous PrAlO3 layers were deposited on the SrTiO3 (001) by atomic layer deposition using tris(isopropylcyclopentadienyl)praseodymium (Pr(C5H4iPr)3), trimethylaluminum (AlMe3) and water.
Optical and Dielectric Studies on Semiorganic Nonlinear Optical Crystal by So...ijrap
The field of nonlinear optics became practically a reality after the invention of laser. High performance electro-optic switching elements for telecommunication and optical information processing are based on materials with high nonlinear optical (NLO) properties. Single crystals of nonlinear optical material Llysine sulphate (LLS) are grown by slow evaporation technique. The crystal structure and lattice parameters are determined for the grown crystal by single X-ray diffraction studies. The wide transparency range of the crystals in the visible region of the electromagnetic spectrum is identified by the UV-Vis-NIR technique. The mechanical property of the grown crystal is determined by Vicker’s microhardness test. It is observed from the microhardness studies of the grown crystals that the hardness increases with increase in load. Meyer’s index n is calculated which proves that the material belongs to soft material category. The dielectric constant and dielectric loss are calculated by varying the frequencies at room temperature. The emission of green light on passing the Nd: YAG laser confirms the second harmonic generation (SHG) property of the crystals .The SHG efficiency of the crystals are found to be better than that of Potassium Di hydrogen Phosphate (KDP)
International Journal of Engineering Research and Applications (IJERA) is an open access online peer reviewed international journal that publishes research and review articles in the fields of Computer Science, Neural Networks, Electrical Engineering, Software Engineering, Information Technology, Mechanical Engineering, Chemical Engineering, Plastic Engineering, Food Technology, Textile Engineering, Nano Technology & science, Power Electronics, Electronics & Communication Engineering, Computational mathematics, Image processing, Civil Engineering, Structural Engineering, Environmental Engineering, VLSI Testing & Low Power VLSI Design etc.
Presented by Peng Zuo at International Conference on Crystal Growth and Epitaxy (ICCGE-19) in Keystone CO, July 28-August 2, 2019.
Solid phase epitaxy (SPE) is a promising approach for expanding the applications of epitaxial complex oxides by providing access to a broader range of compositions and enabling their formation in complex geometries. The SPE of PrAlO3 on SrTiO3 serves as a model system. The interfaces between lanthanide aluminates and SrTiO3 are also of practical interest because these interfaces can host a two-dimensional electron gas. Amorphous PrAlO3 layers were deposited on the SrTiO3 (001) by atomic layer deposition using tris(isopropylcyclopentadienyl)praseodymium (Pr(C5H4iPr)3), trimethylaluminum (AlMe3) and water.
Optical and Dielectric Studies on Semiorganic Nonlinear Optical Crystal by So...ijrap
The field of nonlinear optics became practically a reality after the invention of laser. High performance electro-optic switching elements for telecommunication and optical information processing are based on materials with high nonlinear optical (NLO) properties. Single crystals of nonlinear optical material Llysine sulphate (LLS) are grown by slow evaporation technique. The crystal structure and lattice parameters are determined for the grown crystal by single X-ray diffraction studies. The wide transparency range of the crystals in the visible region of the electromagnetic spectrum is identified by the UV-Vis-NIR technique. The mechanical property of the grown crystal is determined by Vicker’s microhardness test. It is observed from the microhardness studies of the grown crystals that the hardness increases with increase in load. Meyer’s index n is calculated which proves that the material belongs to soft material category. The dielectric constant and dielectric loss are calculated by varying the frequencies at room temperature. The emission of green light on passing the Nd: YAG laser confirms the second harmonic generation (SHG) property of the crystals .The SHG efficiency of the crystals are found to be better than that of Potassium Di hydrogen Phosphate (KDP)
International Journal of Engineering Research and Applications (IJERA) is an open access online peer reviewed international journal that publishes research and review articles in the fields of Computer Science, Neural Networks, Electrical Engineering, Software Engineering, Information Technology, Mechanical Engineering, Chemical Engineering, Plastic Engineering, Food Technology, Textile Engineering, Nano Technology & science, Power Electronics, Electronics & Communication Engineering, Computational mathematics, Image processing, Civil Engineering, Structural Engineering, Environmental Engineering, VLSI Testing & Low Power VLSI Design etc.
(10-11) preferential orientation of polycrystalline AlN grown on SiO2/Si wafe...Javier García Molleja
Authors: Juan Bürgi, Javier García Molleja, Raúl Bolmaro, Mattia Piccoli, Edoardo Bemporad, Aldo Craievich, Jorge Feugeas.
Published in: The European Physical Journal - Applied Physics (2016) 74: 10301
Because of copyright transfer to EDP Sciences only the first page is provided. Available at: http://dx.doi.org/10.1051/epjap/2016150446
This is a power point presentation of project work on preparing Zinc oxide thin films by using SILAR technique and CBD technique and studying its characteristics.
An Investigation of SILAR Grown Cobalt Selenide Thin Films IIJSRJournal
Nowadays, several deposition techniques have been used to produce thin film materials. The obtained films were characterized by using different tools. These semiconductor materials could be employed in solar cell, laser devices and opto-electronic devices. The main objective of this work is to produce cobalt selenide thin films through successive ionic layer adsorption and reaction method. Advantages of this method include simple procedures, inexpensive equipment, it does not need expensive vacuum system and high quality substrate. During the deposition process, the films were deposited onto soda lime glass under various anionic bath immersion times. The properties of the films were studied for the first time via field emission scanning electron microscopy (FESEM) and UV-visible spectrophotometer. Based on the FESEM analysis, uniform morphology could be observed for the sample produced for 30 seconds (anionic immersion time). The band gap was about 2.6 eV and the optical transmission increased in the visible region could be detected for these samples.
Synthesis and charaterization of la1 x srxmno3 perovskite nanoparticlesMai Trần
In recent times perovskite materials are extensively studied and have attracted much attention because they exhibit interesting the properties, showing potential applications in commercial, technical and biomedical. In Vietnam, perovskite materials be of interest research and applications are strong but with major research direction is to go deep into the electrical properties and the magnetic properties. The Lanthanum Strontium manganite is a perovskite-based crystal-structured ceramic material with the formula of La1-xSrxMnO3, where x describes the doping ratio. It has attracted much attention due to its good magnetic, electrical, and catalytic properties and is becoming an attractive possibility material in several biomedical applications, particularly with nano-size. In industry, this material is commonly used in as a cathode material in commercially produced solid oxide fuel cells. In this thesis, we present the Perovskite nanoparticles La1-xSrxMnO3 were successfully synthesized of the nanosize La1-xSrxMnO3 at x = 0; 0.1; 0.2; 0.3 and 0.4 which prepared by a modified sol-gel method. Structure and magnetic properties of them were systematically investigated in dependence on doped Sr ratio x. The structure was investigated by XRD and show slightly changed but magnetic properties varied strongly with changing the doping ratio x. Magnetic properties of samples were studied by Vibrating Sample Mode of Physical Properties Measurement System show at the room temperature, the samples show superparamagnetic properties with high saturated magnetization MS of 57 emu/g which strongly dependents on the doped Sr ratio x.
Synthesis, Characterization of ZnS nanoparticles by Coprecipitation method us...IOSR Journals
ZnS nanoparticles are prepared by coprecipitation method using various capping agents like PVP (polyvinylpyrrolidone), PVA (polyvinylalcohol) and PEG-4000 (polyethyleneglycol). These are characterized by UV-Visible spectra, X-ray diffraction (XRD) studies, Fourier Transform Infra-red spectra (FTIR) and Transmission electron microscopy (TEM). UV-Visible absorption spectra are used to find the optical band gap and the values obtained have been found to be in the range of 3.80-4.00eV. The particle size of nanoparticles calculated from XRD pattern has been in the range of 2-4 nm. It is also observed that the particle size of nanoparticle is affected by the nature of capping agent. Photo catalytic degradation of xylenol orange (XO) by the nanoparticles shows that these act as photo catalysts under sunlight irradiation. The XO dye was degraded more than 87.24, 83.42 and 73.05% in the presence of PEG-4000, PVA and PVP capped ZnS nanoparticles in 120, 150 and 180 min. respectively. The kinetics of catalyzed by synthesized ZnS nanoparticles with XO dye follows pseudo-first order kinetics with reasonable apparent rate constants.
(10-11) preferential orientation of polycrystalline AlN grown on SiO2/Si wafe...Javier García Molleja
Authors: Juan Bürgi, Javier García Molleja, Raúl Bolmaro, Mattia Piccoli, Edoardo Bemporad, Aldo Craievich, Jorge Feugeas.
Published in: The European Physical Journal - Applied Physics (2016) 74: 10301
Because of copyright transfer to EDP Sciences only the first page is provided. Available at: http://dx.doi.org/10.1051/epjap/2016150446
This is a power point presentation of project work on preparing Zinc oxide thin films by using SILAR technique and CBD technique and studying its characteristics.
An Investigation of SILAR Grown Cobalt Selenide Thin Films IIJSRJournal
Nowadays, several deposition techniques have been used to produce thin film materials. The obtained films were characterized by using different tools. These semiconductor materials could be employed in solar cell, laser devices and opto-electronic devices. The main objective of this work is to produce cobalt selenide thin films through successive ionic layer adsorption and reaction method. Advantages of this method include simple procedures, inexpensive equipment, it does not need expensive vacuum system and high quality substrate. During the deposition process, the films were deposited onto soda lime glass under various anionic bath immersion times. The properties of the films were studied for the first time via field emission scanning electron microscopy (FESEM) and UV-visible spectrophotometer. Based on the FESEM analysis, uniform morphology could be observed for the sample produced for 30 seconds (anionic immersion time). The band gap was about 2.6 eV and the optical transmission increased in the visible region could be detected for these samples.
Synthesis and charaterization of la1 x srxmno3 perovskite nanoparticlesMai Trần
In recent times perovskite materials are extensively studied and have attracted much attention because they exhibit interesting the properties, showing potential applications in commercial, technical and biomedical. In Vietnam, perovskite materials be of interest research and applications are strong but with major research direction is to go deep into the electrical properties and the magnetic properties. The Lanthanum Strontium manganite is a perovskite-based crystal-structured ceramic material with the formula of La1-xSrxMnO3, where x describes the doping ratio. It has attracted much attention due to its good magnetic, electrical, and catalytic properties and is becoming an attractive possibility material in several biomedical applications, particularly with nano-size. In industry, this material is commonly used in as a cathode material in commercially produced solid oxide fuel cells. In this thesis, we present the Perovskite nanoparticles La1-xSrxMnO3 were successfully synthesized of the nanosize La1-xSrxMnO3 at x = 0; 0.1; 0.2; 0.3 and 0.4 which prepared by a modified sol-gel method. Structure and magnetic properties of them were systematically investigated in dependence on doped Sr ratio x. The structure was investigated by XRD and show slightly changed but magnetic properties varied strongly with changing the doping ratio x. Magnetic properties of samples were studied by Vibrating Sample Mode of Physical Properties Measurement System show at the room temperature, the samples show superparamagnetic properties with high saturated magnetization MS of 57 emu/g which strongly dependents on the doped Sr ratio x.
Synthesis, Characterization of ZnS nanoparticles by Coprecipitation method us...IOSR Journals
ZnS nanoparticles are prepared by coprecipitation method using various capping agents like PVP (polyvinylpyrrolidone), PVA (polyvinylalcohol) and PEG-4000 (polyethyleneglycol). These are characterized by UV-Visible spectra, X-ray diffraction (XRD) studies, Fourier Transform Infra-red spectra (FTIR) and Transmission electron microscopy (TEM). UV-Visible absorption spectra are used to find the optical band gap and the values obtained have been found to be in the range of 3.80-4.00eV. The particle size of nanoparticles calculated from XRD pattern has been in the range of 2-4 nm. It is also observed that the particle size of nanoparticle is affected by the nature of capping agent. Photo catalytic degradation of xylenol orange (XO) by the nanoparticles shows that these act as photo catalysts under sunlight irradiation. The XO dye was degraded more than 87.24, 83.42 and 73.05% in the presence of PEG-4000, PVA and PVP capped ZnS nanoparticles in 120, 150 and 180 min. respectively. The kinetics of catalyzed by synthesized ZnS nanoparticles with XO dye follows pseudo-first order kinetics with reasonable apparent rate constants.
Synthesis and Characterisation of Copper Oxide nanoparticlesIOSR Journals
Cupric oxide (CuO) nanoparticles were prepared by the chemical route by calcinations at a higher temperature from 300oC to 400 oC. For the comparison transmission electron microscopy (TEM) and x-ray diffraction (XRD) measurements were made through JCPDS. There is good agreement between data produced by spectroscopy and the microscopic measurements.
Synthesis Of Nanostructured TiO2 Thin Films By Pulsed Laser Deposition (PLD) ...sarmad
Sarmad Sabih Al-Obaidi
Ali Ahmed Yousif
Abstract
In this work, nanostructured TiO2 thin films were grown by pulsed laser deposition (PLD) technique on glass substrates. TiO2 thin films then were annealed at 400-600 °C in air for a period of 2 hours. Effect of annealing on the structural and morphological were studied. Many growth parameters have been considered to specify the optimum conditions, namely substrate temperature (300 °C), oxygen pressure (10-2 Torr), laser fluence energy density (0.4 J/cm2), using double frequency Q-switching Nd:YAG laser beam (wavelength 532nm), repetition rate (1-6 Hz) and the pulse duration of 10 ns. The results of the X-ray test show that all nanostructures tetragonal are polycrystalline. These results show that grain size increase from 19.5 nm to 29.5 with the increase of annealing temperature. The XRD results also reveal that the deposited thin film, annealed at 400 °C of TiO2 have anatase phase. Thin films annealed at 500 °C and 600 °C have mixed anatase and rutile phases. Full Width at Half Maximum (FWHM) values of the (101) peaks of these films decrease from 0.450° to 0.301° with the increase of annealing temperature. Surface morphology of the thin films have been studied by using atomic force microscopes (AFM). AFM measurements confirmed that the films have good crystalline and homogeneous surface. The Root Mean Square (RMS) value of thin films surface roughness are increased with the increase of annealing temperature.
الخلاصة
على (PLD) النانویة بوساطة تقنیة ترسیب اللیزر النبضي (TiO في ھذا البحث، تم انماء أغشیة اوكسید التیتانیوم ( 2
الرقیقة من 400 الى 600 درجة مئویة في الھواء مدة ساعتین . ودرس تأثیر TiO قواعد زجاجیة. ومن ثم لدنت أغشیة 2
التلدین في الخصائص التركیبیة والطبوغرافیة. عوامل عدیدة لأنماء الأغشیة اخذت بنظر الاعتبار لتحدید الحالة المثلى مثل
0.4 ) باستخدام J/cm 10-2 ) ،كثافة طاقة الفیض اللیزري( 2 Torr) 300 ) ،ضغط الأوكسجین ºC) درجة حرارة القاعدة
532 بمعدل تكراریة - 1 nm التردد المضاعف للیزر النیدیمیوم- یاك الذي یعمل بتقنیة عامل النوعیة عند الطول الموجي
6 ھرتز) وامد نبضة 10 نانوثانیة. تظُھر نتائج فحوصات الأشعة السینیة أن جمیع التراكیب النانویة رباعیة متعددة )
التبلور. وان ھذه النتائج تظھر زیادة في حجم الحبیبات من 19.5 نانومتر الى 29.5 نانومترمع زیادة درجة حرارة التلدین.
نتائج الأشعة السینیة اظھرت ایضا ان الغشاء المرسب والملدن في 400 درجة مئویة لثنائي اوكسید
Synthesis and characterization of zno thin films deposited by chemical bath t...eSAT Journals
Abstract ZnO thin films have been deposited on silica glass substrate using the chemical bath deposition technique. The precursors used were zinc chloride and aqueous ammonia. The solution was stirred continuously with the help of a magnetic stirrer at a bath temperature of 70 oC and a deposition time of 70 minutes. The elemental composition and the surface morphology were studied using energy dispersive and scanning electron microscopy. The band gap was 2.72, 2.66, 2.60 eV for as-deposited, annealed at 200 oC and 300 oC respectively. There was a red shift in the band gap energy as the annealing temperature was increased. This might be due to an improvement in the crystallinity of the ZnO thin films. Index Terms: Zinc oxide, chemical bath, band gap, annealing
IJRET : International Journal of Research in Engineering and Technology is an international peer reviewed, online journal published by eSAT Publishing House for the enhancement of research in various disciplines of Engineering and Technology. The aim and scope of the journal is to provide an academic medium and an important reference for the advancement and dissemination of research results that support high-level learning, teaching and research in the fields of Engineering and Technology. We bring together Scientists, Academician, Field Engineers, Scholars and Students of related fields of Engineering and Technology
Study of columnar growth polycrystalline (sn, cr) co doped in2 o3 films depos...EROMOR
In this work, (Sn, Cr) co-doped In2O3 polycrystalline films were grown at room temperature by sputtering method using a base pressure of ∼5×10−2mbar (a low vacuum condition) in order to improve the oxidation process and reduce the time of films production.
Camille Bishop, a 5th-year graduate student working in Mark Ediger’s group as part of the MRSEC IRG 1, presented her work on liquid crystal-like order in vapor-deposited glasses at the Gordon Conference on Liquid Crystals in New London, NH that took place from July 7th-12th, 2019.
The poster shows a wide range of different organic glasses created using physical vapor deposition, a thin film fabrication technique. How to control and tune the molecular organization in these structured glasses is discussed. Control of the structure in these sorts of materials should enable them to be applied to novel organic electronics.
Amorphous solids lack long-range order but have atomic and nanoscale structural and chemical features that define many of their properties. This presentation describes the structure of important classes of amorphous materials, the geometrical and chemical concepts that govern the structure, and discusses experimental methods that enable precise characterization of structural parameters.
Presented by Dr. Paul Voyles and Dr. Paul Evans.
Master's thesis defense presentation by Valentin Paul. Presented 8/5/2019 for the Department of Engineering Physics at the University of Wisconsin-Madison
Presented by Dr. Mark Ediger
Part of the 2019 MRSEC Summer Seminar Series
The thermodynamics of glasses were reviewed and how the state of a glass is influenced by different methods of preparation was briefly described. A qualitative description of glasses within the framework of the potential energy landscape was presented, with an emphasis on the configurational entropy. Relaxation processes in glasses were also discussed, including physical aging, sub-Tg relaxations, and quantum tunneling two-level systems. Along the way, the audience was led to understand what is wrong with these statements: 1) All glasses with a given composition have the same properties. 2) Nothing can move in a glass. 3) There is nothing interesting about glasses.
Presented by Dr. John Perepezko as part of the 2019 MRSEC Summer Seminar Series. MRSEC hosted this inaugural series of pedagogical seminars for the benefit of students and postdocs interested in a deeper dive into selected topics. Presentations are selected based on topics requested by students.
This presentation covers the basic reaction pathways controlling the crystallization of amorphous materials. The topics include a survey of nucleation kinetics, phase section thermodynamics, growth kinetics and the representation of the overall transformation kinetics. Some of the ways that the popular analysis methods are used and abused are highlighted and the importance of incorporating a detailed microstructure evaluation in any kinetics analysis is pointed out.
Mark D. Ediger (University of Wisconsin-Madison) presents at the Fred Kavli Special Symposium: From Unit Cell to Biological Cell at the APS March Meeting 2019 in Boston, MA. View abstract below.
-------------------------------------------------
The Design And Growth Of Ultra-Stable Glasses
-------------------------------------------------
Glasses are generally regarded as highly disordered and the idea of "controlling" molecular packing in glasses is reasonably met with skepticism. However, as glasses are non-equilibrium materials, a vast array of amorphous structures are possible in principle. Physical vapor deposition (PVD) allows a surprising amount of control over molecular packing in glasses and can be used to test the limits of amorphous packing in two ways. PVD can prepare glasses that approach the limits of the most dense and lowest energy amorphous packings that are possible. The activation barriers for rearrangements in these materials are very high, giving rise to high thermal and chemical stability. In addition, PVD allows control over anisotropic packing in glasses. For rod-shaped molecules, for example, glasses can be prepared in which the molecules have a substantial tendency to stand-up or lie-down relative to the substrate. As these materials have applications in organic electronics, an important question is: How much anisotropic order can be added to a glass without destroying key technological advantages such as macroscopic homogeneity? The high density and anisotropic packing of PVD glasses can be explained by a mechanism that is "anti-epitaxial" as structure is templated by the top surface rather than by the underlying substrate.
Seminar of U.V. Spectroscopy by SAMIR PANDASAMIR PANDA
Spectroscopy is a branch of science dealing the study of interaction of electromagnetic radiation with matter.
Ultraviolet-visible spectroscopy refers to absorption spectroscopy or reflect spectroscopy in the UV-VIS spectral region.
Ultraviolet-visible spectroscopy is an analytical method that can measure the amount of light received by the analyte.
Cancer cell metabolism: special Reference to Lactate PathwayAADYARAJPANDEY1
Normal Cell Metabolism:
Cellular respiration describes the series of steps that cells use to break down sugar and other chemicals to get the energy we need to function.
Energy is stored in the bonds of glucose and when glucose is broken down, much of that energy is released.
Cell utilize energy in the form of ATP.
The first step of respiration is called glycolysis. In a series of steps, glycolysis breaks glucose into two smaller molecules - a chemical called pyruvate. A small amount of ATP is formed during this process.
Most healthy cells continue the breakdown in a second process, called the Kreb's cycle. The Kreb's cycle allows cells to “burn” the pyruvates made in glycolysis to get more ATP.
The last step in the breakdown of glucose is called oxidative phosphorylation (Ox-Phos).
It takes place in specialized cell structures called mitochondria. This process produces a large amount of ATP. Importantly, cells need oxygen to complete oxidative phosphorylation.
If a cell completes only glycolysis, only 2 molecules of ATP are made per glucose. However, if the cell completes the entire respiration process (glycolysis - Kreb's - oxidative phosphorylation), about 36 molecules of ATP are created, giving it much more energy to use.
IN CANCER CELL:
Unlike healthy cells that "burn" the entire molecule of sugar to capture a large amount of energy as ATP, cancer cells are wasteful.
Cancer cells only partially break down sugar molecules. They overuse the first step of respiration, glycolysis. They frequently do not complete the second step, oxidative phosphorylation.
This results in only 2 molecules of ATP per each glucose molecule instead of the 36 or so ATPs healthy cells gain. As a result, cancer cells need to use a lot more sugar molecules to get enough energy to survive.
Unlike healthy cells that "burn" the entire molecule of sugar to capture a large amount of energy as ATP, cancer cells are wasteful.
Cancer cells only partially break down sugar molecules. They overuse the first step of respiration, glycolysis. They frequently do not complete the second step, oxidative phosphorylation.
This results in only 2 molecules of ATP per each glucose molecule instead of the 36 or so ATPs healthy cells gain. As a result, cancer cells need to use a lot more sugar molecules to get enough energy to survive.
introduction to WARBERG PHENOMENA:
WARBURG EFFECT Usually, cancer cells are highly glycolytic (glucose addiction) and take up more glucose than do normal cells from outside.
Otto Heinrich Warburg (; 8 October 1883 – 1 August 1970) In 1931 was awarded the Nobel Prize in Physiology for his "discovery of the nature and mode of action of the respiratory enzyme.
WARNBURG EFFECT : cancer cells under aerobic (well-oxygenated) conditions to metabolize glucose to lactate (aerobic glycolysis) is known as the Warburg effect. Warburg made the observation that tumor slices consume glucose and secrete lactate at a higher rate than normal tissues.
A brief information about the SCOP protein database used in bioinformatics.
The Structural Classification of Proteins (SCOP) database is a comprehensive and authoritative resource for the structural and evolutionary relationships of proteins. It provides a detailed and curated classification of protein structures, grouping them into families, superfamilies, and folds based on their structural and sequence similarities.
Introduction:
RNA interference (RNAi) or Post-Transcriptional Gene Silencing (PTGS) is an important biological process for modulating eukaryotic gene expression.
It is highly conserved process of posttranscriptional gene silencing by which double stranded RNA (dsRNA) causes sequence-specific degradation of mRNA sequences.
dsRNA-induced gene silencing (RNAi) is reported in a wide range of eukaryotes ranging from worms, insects, mammals and plants.
This process mediates resistance to both endogenous parasitic and exogenous pathogenic nucleic acids, and regulates the expression of protein-coding genes.
What are small ncRNAs?
micro RNA (miRNA)
short interfering RNA (siRNA)
Properties of small non-coding RNA:
Involved in silencing mRNA transcripts.
Called “small” because they are usually only about 21-24 nucleotides long.
Synthesized by first cutting up longer precursor sequences (like the 61nt one that Lee discovered).
Silence an mRNA by base pairing with some sequence on the mRNA.
Discovery of siRNA?
The first small RNA:
In 1993 Rosalind Lee (Victor Ambros lab) was studying a non- coding gene in C. elegans, lin-4, that was involved in silencing of another gene, lin-14, at the appropriate time in the
development of the worm C. elegans.
Two small transcripts of lin-4 (22nt and 61nt) were found to be complementary to a sequence in the 3' UTR of lin-14.
Because lin-4 encoded no protein, she deduced that it must be these transcripts that are causing the silencing by RNA-RNA interactions.
Types of RNAi ( non coding RNA)
MiRNA
Length (23-25 nt)
Trans acting
Binds with target MRNA in mismatch
Translation inhibition
Si RNA
Length 21 nt.
Cis acting
Bind with target Mrna in perfect complementary sequence
Piwi-RNA
Length ; 25 to 36 nt.
Expressed in Germ Cells
Regulates trnasposomes activity
MECHANISM OF RNAI:
First the double-stranded RNA teams up with a protein complex named Dicer, which cuts the long RNA into short pieces.
Then another protein complex called RISC (RNA-induced silencing complex) discards one of the two RNA strands.
The RISC-docked, single-stranded RNA then pairs with the homologous mRNA and destroys it.
THE RISC COMPLEX:
RISC is large(>500kD) RNA multi- protein Binding complex which triggers MRNA degradation in response to MRNA
Unwinding of double stranded Si RNA by ATP independent Helicase
Active component of RISC is Ago proteins( ENDONUCLEASE) which cleave target MRNA.
DICER: endonuclease (RNase Family III)
Argonaute: Central Component of the RNA-Induced Silencing Complex (RISC)
One strand of the dsRNA produced by Dicer is retained in the RISC complex in association with Argonaute
ARGONAUTE PROTEIN :
1.PAZ(PIWI/Argonaute/ Zwille)- Recognition of target MRNA
2.PIWI (p-element induced wimpy Testis)- breaks Phosphodiester bond of mRNA.)RNAse H activity.
MiRNA:
The Double-stranded RNAs are naturally produced in eukaryotic cells during development, and they have a key role in regulating gene expression .
Earliest Galaxies in the JADES Origins Field: Luminosity Function and Cosmic ...Sérgio Sacani
We characterize the earliest galaxy population in the JADES Origins Field (JOF), the deepest
imaging field observed with JWST. We make use of the ancillary Hubble optical images (5 filters
spanning 0.4−0.9µm) and novel JWST images with 14 filters spanning 0.8−5µm, including 7 mediumband filters, and reaching total exposure times of up to 46 hours per filter. We combine all our data
at > 2.3µm to construct an ultradeep image, reaching as deep as ≈ 31.4 AB mag in the stack and
30.3-31.0 AB mag (5σ, r = 0.1” circular aperture) in individual filters. We measure photometric
redshifts and use robust selection criteria to identify a sample of eight galaxy candidates at redshifts
z = 11.5 − 15. These objects show compact half-light radii of R1/2 ∼ 50 − 200pc, stellar masses of
M⋆ ∼ 107−108M⊙, and star-formation rates of SFR ∼ 0.1−1 M⊙ yr−1
. Our search finds no candidates
at 15 < z < 20, placing upper limits at these redshifts. We develop a forward modeling approach to
infer the properties of the evolving luminosity function without binning in redshift or luminosity that
marginalizes over the photometric redshift uncertainty of our candidate galaxies and incorporates the
impact of non-detections. We find a z = 12 luminosity function in good agreement with prior results,
and that the luminosity function normalization and UV luminosity density decline by a factor of ∼ 2.5
from z = 12 to z = 14. We discuss the possible implications of our results in the context of theoretical
models for evolution of the dark matter halo mass function.
Richard's aventures in two entangled wonderlandsRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
Solid-Phase Epitaxy of Atomic Layer Deposited PrAlO3 Films
1. University of Wisconsin-Madison Department of Materials Science and Engineering
Solid-Phase Epitaxy of Atomic
Layer Deposited PrAlO3 Films
Yajin Chen,1 Wathsala L. I. Waduge,2 Peng Zuo,1 Thomas F. Kuech,3 Susan
E. Babcock,1 Charles H. Winter2 and Paul G. Evans1
ychen446@wisc.edu
1Department of Materials Science and Engineering, University of Wisconsin-
Madison, Madison, WI 53706, USA
2Department of Chemistry, Wayne State University, Detroit, MI 48202, USA
3Department of Chemical and Biological Engineering, University of
Wisconsin-Madison, Madison, WI 53706, USA
2. Polar/nonpolar oxide interfaces REBO3/SrTiO3 (100) (RE = La, Pr, or Nd, B =
Al or Ga) all produce two-dimensional electron gases (2DEG).
Vapor-phase epitaxial growth techniques are limited in two-dimensional
geometries.
Limitation in the creation of complex oxide quantum
electronic heterostructures
2
A. Annadi et al., Phys. Rev. B 86, 085450 (2012)
3. Solid phase epitaxy (SPE)
• Low deposition temperature A wider range of compositions
• Patterned substrates Deposition in 3D geometries
SPE may allow the creation of 2DEG at complex oxide interfaces in new
geometries.
Novel method to expand compositions and geometries
3Y. Chen et al., ACS Appl. Mater. Interfaces 9, 41034-41042 (2017)
Y. Chen et al., J. Phys. Chem. C (2019)
Amorphous
Single Crystal
Substrate
Mask
P. G. Evans et al., Curr. Opin. Solid State
Mater. Sci. 22, 229 (2018)
4. Slow crystallization of amorphous PrAlO3 on SiO2/Si
4
43-nm-thick PrAlO3 film on a
SiO2/Si substrate grown by
atomic layer deposition at
300 °C.
Grazing-incidence x-ray
scattering indicates the film
is amorphous.
The film remains
amorphous after annealing
at 1000 °C for 8 h.
W. Waduge et al., Solid Phase Epitaxy of PrAlO3 Films
Grown by Atomic Layer Deposition, In preparation (2019)
5. Crystallization of amorphous PrAlO3 on (001) STO
5
206-nm-thick PrAlO3 film on
a TiO2-terminated SrTiO3
(STO) (001) substrate
grown by atomic layer
deposition at 300 °C.
The amorphous film fully
crystallizes after annealing
at a relatively lower
temperature, 800 °C for 3h.
6. 6
Only crystalline PrAlO3 phase forms.
Crystallized PrAlO3 film shows texture along [001] orientation.
Only crystalline PrAlO3 phase forms
PrAlO3 pseudo-cubic structure with a = 3.772 Å[1]
SrTiO3 cubic structure with a = 3.905 Å
[1] K. Yang et al. Scientific reports 6, 34667 (2016)
7. Characterization of [001]-oriented PrAlO3 film
7
θ-2θ scan along sample normal Rocking curve measurement
Crystallized PrAlO3 film is highly
[001]-oriented, the same
orientation as the STO substrate.
FWHM = 7°
8. Conclusion & Acknowledgements
8
Develop ALD procedures to deposit amorphous PrAlO3 thin films.
Achieve highly [001]-oriented PrAlO3 films on SrTiO3 (001) by SPE at a
relatively low annealing temperature, at which PrAlO3 films on SiO2/Si remain
amorphous.
University of Wisconsin-Madison: P. Zuo,
T. F. Kuech, S. E. Babcock, P. G. Evans
Wayne State University: W. Waduge, C.
H. Winter.
Funding support from
NSF through the
University of Wisconsin
MRSEC (DMR-1720415)
• Y. Chen et al., ACS Appl. Mater.
Interfaces 9, 41034-41042 (2017)
• P. G. Evans et al., Curr. Opin. Solid State
Mater. Sci. 22, 229 (2018)
• Y. Chen et al., J. Phys. Chem. C (2019)
• W. Waduge et al., Solid Phase Epitaxy of
PrAlO3 Films Grown by Atomic Layer
Deposition, In preparation (2019)