Open Source/Open Notebook Science Talk at the North Carolina Science Blogging Conference on Jan 20, 2007 by Jean-Claude Bradley.

1. Open Source/Open Notebook Science: Doing science with blogs and wikis [email_address] Jan 20, 2007 Drexel University Chemistry Department

5. Where is Science headed? WE ARE HERE

6. The Robot Scientist

8. How can machines know what is important? Ask the humans

9. UsefulChem Blog

10. What chemists think is important in 2005

11. Find-A-Drug

12. Diketopiperazine Library Evolves to: on pot Ugi reaction/cyclization First iteration: Solid Support Synthesis

13. The Molecules Blog

14. The Experiments Blog

15. Comments from peers

16. The UsefulChem Wiki

17. Telling the story of the failures

18. Experiments moved to wiki

19. Experiment History

20. Experiment Edits

21. Third Party Time-Stamp on Experiment Versions

22. Monitoring experimental progress

23. How are people finding our experiments?

24. Molecules found by InChI

25. Automation in UsefulChem

26. CMLRSS feed on Bioclipse

27. CMLRSS feed on Bloglines

28. Open science connectivity More info on open source science here http://usefulchem.wikispaces.com

29. Extending the interaction outside of science

30. usefulchem.blogspot.com The blog as an integrative tool

31. usefulchem.wikispaces.com/Exp049 The wiki as the laboratory notebook

32. usefulchem.wikispaces.com/Exp049 (2 min) Graphical Mining of Data with JSpecView

33. neurodatabase.org Raw Experimental Data

34. Selected Experiments (some failed) Orgprepdaily.wordpress.com

35. Orgprepdaily.wordpress.com Vendor Reliability

36. Generalized Protocols Openwetware.org

37. Lab Notebook for intra-group communication Openwetware.org

38. Discussing Hypotheses RRResearch.blogspot.com

39. Writing Code for the Automation Component Also – Rich Apodaca, Christoph Steinbeck, Peter Murray-Rust