1) The document describes a study using induced pluripotent stem cells (iPSCs) derived from bipolar disorder (BD) patients to model the disease in vitro.
2) Hippocampal dentate gyrus-like neurons were differentiated from iPSCs and showed hyper-excitability at both the molecular and functional levels in BD-derived neurons.
3) Treatment with lithium rescued the hyper-excitability phenotype in neurons derived from lithium-responsive BD patients but not lithium non-responsive patients, suggesting patient-specific responses.
SCHIZOPHRENIA RESEARCH FORUM - LIVE WEBINAR June 2017 Kristen Brennandwef
Kristen Brennand presentation at the live webinar of June 28, 2017 hosted by the Schizophrenia Research Forum (http://www.schizophreniaforum.org/forums/webinar-modeling-neuropsychiatric-disorders-using-vitro-models)
Genetics of cognitive dysfunction in SchizophreniaStudy Buddy
In this ppt we discuss the genetic basis of cognitive dysfunction associated with schizophrenia. We discuss the 5 main genes associated with both scz. and cognitive dysfunction. Another important aspect we cover is the dopaminergic pathway of signal transduction and its impairement in scz. patients.
SCHIZOPHRENIA RESEARCH FORUM - LIVE WEBINAR June 2017 Kristen Brennandwef
Kristen Brennand presentation at the live webinar of June 28, 2017 hosted by the Schizophrenia Research Forum (http://www.schizophreniaforum.org/forums/webinar-modeling-neuropsychiatric-disorders-using-vitro-models)
Genetics of cognitive dysfunction in SchizophreniaStudy Buddy
In this ppt we discuss the genetic basis of cognitive dysfunction associated with schizophrenia. We discuss the 5 main genes associated with both scz. and cognitive dysfunction. Another important aspect we cover is the dopaminergic pathway of signal transduction and its impairement in scz. patients.
Live webinar recorded September 7, 2016, hosted by the Lewy Body Dementia Association (www.lbda.org), featuring Dr. James Leverenz and moderated by Angela Taylor.
Review recording and more information at www.lbda.org or at the event page: www.worldeventsforum.net/lbda
Genome Wide Association Studies in PsychiatryDr.Guru S Gowda
Neuropsychiatric and neurodevelopmental disorders are multifactorial in origin with multiple genetic determinants and its interaction with others resulting in clinically diverse phenotypes. Affected individuals harbour different risk alleles in a heterogeneous genetic background that make candidate disorder genes difficult to detect via studies. One such effort to find the influence of genetic factors is Genome Wide Association Study (GWAS), which is an approach to identify common genetic variations like Single-Nucleotide Polymorphism (SNP) and Copy Number Variation (CNV) associated with a disease / traits. It is a powerful method for such investigations, particularly by enabling the integrated analysis of SNPs and CNVs. There are now hundreds of candidate genes with DNA copy number variations or single nucleotide polymorphisms (SNPs) characterised from clinically diagnosed individuals.
With more mature molecular and statistical methods, we are entering a new era of Network and Pathway Analyses. This may reveal coherent biological processes contributing to psychiatric illnesses but the evidence is limited to date.
This seminar aims at providing a broad overview on GWAS - History, approach to G W A S, GWAS studies in Psychiatry and its Implication, complex network and pathway analysis concepts, current challenges etc, and ends with conclusion and future directions.
Anne Bassett: Studying Psychosis in 22q11 Deletion Syndromewef
Presentation made July 28, 2016 at the live webinar hosted by the Schizophrenia Research Forum and titled Studying Psychosis in 22q11 Deletion Syndrome. Video recording and additional materials at http://www.schizophreniaforum.org/for/live/detail.asp?liveID=100
Stanislav Zakharenko: Studying Psychosis in 22q11 Deletion Syndromewef
Presentation made July 28, 2016 at the live webinar hosted by the Schizophrenia Research Forum and titled Studying Psychosis in 22q11 Deletion Syndrome. Video recording and additional materials at http://www.schizophreniaforum.org/for/live/detail.asp?liveID=100
Carrie Bearden: Studying Psychosis in 22q11 Deletion Syndromewef
Presentation made at the live webinar hosted by Schizophrenia Research Forum on the 28th of July, 2016, titled Studying Psychosis in 22q11 Deletion Syndrome. Additional recording and materials available at the SRF website: http://www.schizophreniaforum.org/for/live/detail.asp?liveID=100
Altered proliferation and networks in neural cells derived from idiopathic au...Masuma Sani
Autism Spectrum Disorders; heterogeneous nature of genetic and brain pathology in ASD– which makes it difficult to produce relevant animal and cell models
Molecular Substrates of Drug Abuse in a Schizophrenic PopulationAlan Lesselyong
This presentation is a Work In Progress (WIP) covering experiments examining the molecular correlates of drug abuse in human brains diagnosed with schizophrenia
Live webinar recorded September 7, 2016, hosted by the Lewy Body Dementia Association (www.lbda.org), featuring Dr. James Leverenz and moderated by Angela Taylor.
Review recording and more information at www.lbda.org or at the event page: www.worldeventsforum.net/lbda
Genome Wide Association Studies in PsychiatryDr.Guru S Gowda
Neuropsychiatric and neurodevelopmental disorders are multifactorial in origin with multiple genetic determinants and its interaction with others resulting in clinically diverse phenotypes. Affected individuals harbour different risk alleles in a heterogeneous genetic background that make candidate disorder genes difficult to detect via studies. One such effort to find the influence of genetic factors is Genome Wide Association Study (GWAS), which is an approach to identify common genetic variations like Single-Nucleotide Polymorphism (SNP) and Copy Number Variation (CNV) associated with a disease / traits. It is a powerful method for such investigations, particularly by enabling the integrated analysis of SNPs and CNVs. There are now hundreds of candidate genes with DNA copy number variations or single nucleotide polymorphisms (SNPs) characterised from clinically diagnosed individuals.
With more mature molecular and statistical methods, we are entering a new era of Network and Pathway Analyses. This may reveal coherent biological processes contributing to psychiatric illnesses but the evidence is limited to date.
This seminar aims at providing a broad overview on GWAS - History, approach to G W A S, GWAS studies in Psychiatry and its Implication, complex network and pathway analysis concepts, current challenges etc, and ends with conclusion and future directions.
Anne Bassett: Studying Psychosis in 22q11 Deletion Syndromewef
Presentation made July 28, 2016 at the live webinar hosted by the Schizophrenia Research Forum and titled Studying Psychosis in 22q11 Deletion Syndrome. Video recording and additional materials at http://www.schizophreniaforum.org/for/live/detail.asp?liveID=100
Stanislav Zakharenko: Studying Psychosis in 22q11 Deletion Syndromewef
Presentation made July 28, 2016 at the live webinar hosted by the Schizophrenia Research Forum and titled Studying Psychosis in 22q11 Deletion Syndrome. Video recording and additional materials at http://www.schizophreniaforum.org/for/live/detail.asp?liveID=100
Carrie Bearden: Studying Psychosis in 22q11 Deletion Syndromewef
Presentation made at the live webinar hosted by Schizophrenia Research Forum on the 28th of July, 2016, titled Studying Psychosis in 22q11 Deletion Syndrome. Additional recording and materials available at the SRF website: http://www.schizophreniaforum.org/for/live/detail.asp?liveID=100
Altered proliferation and networks in neural cells derived from idiopathic au...Masuma Sani
Autism Spectrum Disorders; heterogeneous nature of genetic and brain pathology in ASD– which makes it difficult to produce relevant animal and cell models
Molecular Substrates of Drug Abuse in a Schizophrenic PopulationAlan Lesselyong
This presentation is a Work In Progress (WIP) covering experiments examining the molecular correlates of drug abuse in human brains diagnosed with schizophrenia
Role of pro-brain-derived neurotrophic factor (proBDNF)to ma.docxjoellemurphey
Role of pro-brain-derived neurotrophic factor (proBDNF)
to mature BDNF conversion in activity-dependent
competition at developing neuromuscular synapses
H. Shawn Jea,b,c,1, Feng Yanga,b,d,1, Yuanyuan Jia,e, Guhan Nagappana,e, Barbara L. Hempsteadf, and Bai Lua,b,e,2
aSection on Neural Development and Plasticity, National Institute of Child Health and Human Development, Bethesda, MD 20892-3714; bGenes, Cognition,
and Psychosis Program (GCAP), National Institute of Mental Health, Bethesda, MD 20892-3714; cProgram in Neuroscience and Behavioral Disorders, Duke–
National University of Singapore (Duke-NUS) Graduate Medical School, 169857, Singapore; dLieber Institute for Brain Development, The Johns Hopkins
University Medical Campus, Baltimore, MD 21205; eR&D China, GlaxoSmithKline, Pudong, Shanghai 201203, China; and fDivision of Hematology, Department
of Medicine, Weill Medical College, Cornell University, New York, NY 10021
Edited* by Richard L. Huganir, The Johns Hopkins University School of Medicine, Baltimore, MD, and approved August 20, 2012 (received for review May
10, 2012)
Formation of specific neuronal connections often involves compe-
tition between adjacent axons, leading to stabilization of the active
terminal, while retraction of the less active ones. The underlying
molecular mechanisms remain unknown. We show that activity-
dependent conversion of pro–brain-derived neurotrophic factor
(proBDNF) to mature (m)BDNF mediates synaptic competition. Stim-
ulation of motoneurons triggers proteolytic conversion of proBDNF
to mBDNF at nerve terminals. In Xenopus nerve–muscle cocultures,
in which two motoneurons innervate one myocyte, proBDNF-
p75NTR signaling promotes retraction of the less active terminal,
whereas mBDNF–tyrosine-related kinase B (TrkB) p75NTR (p75 neu-
rotrophin receptor) facilitates stabilization of the active one. Thus,
proBDNF and mBDNF may serve as potential “punishment” and “re-
ward” signals for inactive and active terminals, respectively, and
activity-dependent conversion of proBDNF to mBDNF may regulate
synapse elimination.
neuromuscular junction | pro-neurotrophin | synapse competition
The nervous system responds to experience by altering thenumber and strength of synaptic connections (1). Activity-
dependent synaptic competition, a general process seen in many
parts of the developing nervous system, plays a critical role in
shaping patterns of neuronal connections (2–7). At the neuro-
muscular junction (NMJ), for example, multiple axons compete
for the same postsynaptic muscle cell during early postnatal life
until all but one is eliminated (8–10). Extensive experimental
data support the view that the more active terminal or “cartel”
gets stabilized, whereas less active ones withdraw, resulting in
canonical elimination of polyneuronal innervation (8, 11). It is
generally believed that this synaptic competition is mediated by
a “punishment” or “elimination” signal, produced by the post-
synaptic cell, that cau ...
A guideline for discontinuing antiepileptic drugs in seizure-free patients – ...Dr. Rafael Higashi
Aula apresentada por Dr. Rafael Higashi, médico neurologista sobre quando retirar droga antiepilética. A guideline for discontinuing antiepileptic drugs in seizure-free patients – Summary Statement
Hans Jürgen-Current situation and future perspetives of antipsychotics in sch...Fundación Ramón Areces
'Psiquiatría: situación actual y perspectivas de futuro'. Este es el título del simposio internacional que organizamos el 16 de junio de 2016 en la Fundación Ramón Areces con las fundaciones Juan José López-Ibor y Lilly en homenaje al doctor Juan José López-Ibor, fallecido en enero de 2015. Durante esta jornada, expertos internacionales abordaráon la profunda crisis que atraviesa la psiquiatría como disciplina científica y especialidad médica. Además, a las 19.00 horas, se presentará el libro con el mismo título del simposio, también en recuerdo del doctor López-Ibor.
Parkinson's disease is a brain disorder that progressively affects a person’s ability to control body movements, caused by a disorder of certain nerve cells in a part of the brain that produces dopamine, a chemical messenger the brain uses to help direct and control body movement.
Early diagnosis of Parkinson's disease gives you the best chance of a longer, healthier life. This presentation covers the information about biomarkers for Parkinson Diseases which include biological, physiological and imagine candidate / novel biomarkers.
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Introduction:
RNA interference (RNAi) or Post-Transcriptional Gene Silencing (PTGS) is an important biological process for modulating eukaryotic gene expression.
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This process mediates resistance to both endogenous parasitic and exogenous pathogenic nucleic acids, and regulates the expression of protein-coding genes.
What are small ncRNAs?
micro RNA (miRNA)
short interfering RNA (siRNA)
Properties of small non-coding RNA:
Involved in silencing mRNA transcripts.
Called “small” because they are usually only about 21-24 nucleotides long.
Synthesized by first cutting up longer precursor sequences (like the 61nt one that Lee discovered).
Silence an mRNA by base pairing with some sequence on the mRNA.
Discovery of siRNA?
The first small RNA:
In 1993 Rosalind Lee (Victor Ambros lab) was studying a non- coding gene in C. elegans, lin-4, that was involved in silencing of another gene, lin-14, at the appropriate time in the
development of the worm C. elegans.
Two small transcripts of lin-4 (22nt and 61nt) were found to be complementary to a sequence in the 3' UTR of lin-14.
Because lin-4 encoded no protein, she deduced that it must be these transcripts that are causing the silencing by RNA-RNA interactions.
Types of RNAi ( non coding RNA)
MiRNA
Length (23-25 nt)
Trans acting
Binds with target MRNA in mismatch
Translation inhibition
Si RNA
Length 21 nt.
Cis acting
Bind with target Mrna in perfect complementary sequence
Piwi-RNA
Length ; 25 to 36 nt.
Expressed in Germ Cells
Regulates trnasposomes activity
MECHANISM OF RNAI:
First the double-stranded RNA teams up with a protein complex named Dicer, which cuts the long RNA into short pieces.
Then another protein complex called RISC (RNA-induced silencing complex) discards one of the two RNA strands.
The RISC-docked, single-stranded RNA then pairs with the homologous mRNA and destroys it.
THE RISC COMPLEX:
RISC is large(>500kD) RNA multi- protein Binding complex which triggers MRNA degradation in response to MRNA
Unwinding of double stranded Si RNA by ATP independent Helicase
Active component of RISC is Ago proteins( ENDONUCLEASE) which cleave target MRNA.
DICER: endonuclease (RNase Family III)
Argonaute: Central Component of the RNA-Induced Silencing Complex (RISC)
One strand of the dsRNA produced by Dicer is retained in the RISC complex in association with Argonaute
ARGONAUTE PROTEIN :
1.PAZ(PIWI/Argonaute/ Zwille)- Recognition of target MRNA
2.PIWI (p-element induced wimpy Testis)- breaks Phosphodiester bond of mRNA.)RNAse H activity.
MiRNA:
The Double-stranded RNAs are naturally produced in eukaryotic cells during development, and they have a key role in regulating gene expression .
Slide 1: Title Slide
Extrachromosomal Inheritance
Slide 2: Introduction to Extrachromosomal Inheritance
Definition: Extrachromosomal inheritance refers to the transmission of genetic material that is not found within the nucleus.
Key Components: Involves genes located in mitochondria, chloroplasts, and plasmids.
Slide 3: Mitochondrial Inheritance
Mitochondria: Organelles responsible for energy production.
Mitochondrial DNA (mtDNA): Circular DNA molecule found in mitochondria.
Inheritance Pattern: Maternally inherited, meaning it is passed from mothers to all their offspring.
Diseases: Examples include Leber’s hereditary optic neuropathy (LHON) and mitochondrial myopathy.
Slide 4: Chloroplast Inheritance
Chloroplasts: Organelles responsible for photosynthesis in plants.
Chloroplast DNA (cpDNA): Circular DNA molecule found in chloroplasts.
Inheritance Pattern: Often maternally inherited in most plants, but can vary in some species.
Examples: Variegation in plants, where leaf color patterns are determined by chloroplast DNA.
Slide 5: Plasmid Inheritance
Plasmids: Small, circular DNA molecules found in bacteria and some eukaryotes.
Features: Can carry antibiotic resistance genes and can be transferred between cells through processes like conjugation.
Significance: Important in biotechnology for gene cloning and genetic engineering.
Slide 6: Mechanisms of Extrachromosomal Inheritance
Non-Mendelian Patterns: Do not follow Mendel’s laws of inheritance.
Cytoplasmic Segregation: During cell division, organelles like mitochondria and chloroplasts are randomly distributed to daughter cells.
Heteroplasmy: Presence of more than one type of organellar genome within a cell, leading to variation in expression.
Slide 7: Examples of Extrachromosomal Inheritance
Four O’clock Plant (Mirabilis jalapa): Shows variegated leaves due to different cpDNA in leaf cells.
Petite Mutants in Yeast: Result from mutations in mitochondrial DNA affecting respiration.
Slide 8: Importance of Extrachromosomal Inheritance
Evolution: Provides insight into the evolution of eukaryotic cells.
Medicine: Understanding mitochondrial inheritance helps in diagnosing and treating mitochondrial diseases.
Agriculture: Chloroplast inheritance can be used in plant breeding and genetic modification.
Slide 9: Recent Research and Advances
Gene Editing: Techniques like CRISPR-Cas9 are being used to edit mitochondrial and chloroplast DNA.
Therapies: Development of mitochondrial replacement therapy (MRT) for preventing mitochondrial diseases.
Slide 10: Conclusion
Summary: Extrachromosomal inheritance involves the transmission of genetic material outside the nucleus and plays a crucial role in genetics, medicine, and biotechnology.
Future Directions: Continued research and technological advancements hold promise for new treatments and applications.
Slide 11: Questions and Discussion
Invite Audience: Open the floor for any questions or further discussion on the topic.
Richard's aventures in two entangled wonderlandsRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
4. Lineage-specific differentiation
Advantages of Lineage-specific Differentiation
Homogeneity of characteristics
Cell type relevant to the Disease
Characterize developmental features not end point features
Disadvantages of Lineage–specific Differentiation
Wrong choice of Cell type or phenotype
Does not provide adequate circuit properties
5. Pathobiology of SCZ and BP
Prefrontal Cortex and Hippocampus linked to SCZ and BP
Patients exhibit one or all of the following:
• a reduced volume in non-pyramidal cell layers, including dentate gyrus
• a reduced number of somatostatin-positive and paravalbumin-positive neurons
• reduced somal volume of cornu ammonis sector 2/3
The dentate gyrus contributes to the
formation of memories and plays a role in
depression.
Focus on lineage-specific cellular
phenotypes: dentate granule neurons, the
principal cells of the dentate gyrus
12. 50ms
20mV
25pA
10s
10pA
100ms
-70mV
+ CNQX
A. B.
C. D.
GFP/Prox1/DAPI 50μm
Fig. 2. (A) An hiPSC-derived GFP+ neuron transplanted into the granule cell layer (GCL) of the
mouse DG. (B) Transplanted neurons are active and can generate action potential spikes in
response to somatic current injection. They also functionally integrate into the endogenous
hippocampal network, as evidenced by spontaneous post-synaptic currents (C), and by induced
postsynaptic currents in response to stimulation of upstream presynaptic connections (D). These
responses are attenuated by 10 µM CNQX, indicating that they are mainly generated by
excitatory AMPA receptors.
Human Neurons Functionally Connected in vivo
16. Study how gene>c varia>on contributes to the development of the
disorder
Modeling psychiatric disorders in a dish
A cohort includes Monozygoc twins that are discordant for
schizophrenia (SZ) and healthy control twins
Can we idenfy alteraons that are common to the SZ paents and
non-affected siblings?
Can we idenfy alteraons that are specific to the SZ paents?
Can we idenfy a phenotypic trait that is due to a subset of genes?
28. Reprogramming patients in search of Cell autonomous and genetic
mechanism for BP and Li+ responsiveness
4 - phenotypically normal
3 - Li+ responders
3 - Li+ non-responders
Differentiate into
Dentate Granule- Like
Neurons
Modeling Bipolar Disease with iPSC derived Neurons
Mertens et al Nature 2015
30. 1- Differentially expressed genes in the BD derived DG neurons (456 genes).
2- Expression of representative genes involved in the PKA/PKC and
AP firing systems revealed by RNA-seq – suggesting Hyper-Excitability
35. Heatmaps (k) and MA plots (l) showing that Li significantly altered the
gene expression profile of the LR neurons but not the NR neurons:
456 gene significantly changed in Li+ Rs while only 40 genes changed in NRs
36. Lithium rescues the hyperexcitability in hippocampal neurons
derived from BD patient-iPSCs
38. Sample traces (a) and bar graph (b) showing that the Ca2+ transient events
detected with Fluo 4-AM were abolished by TTX.
39. Somatic Ca2+ imaging analysis reveals hyperactivity in the neural network
formed by the BD iPSC-derived neurons
40. BD neurons show abnormalities in mitochondrial functions
Sample images of neurons expressing DsRed2-mito and Prox1::EGFP
Mitochondrial genes changed in
BP Neuronsfl
41.
42.
43. JC-1 is a cationic dye that can accumulate in energized mitochondria, the
ratio of red to green fluorescence reflects the functional efficiency of
mitochondria
46. Representative traces of APs evoked during 300 ms step-wise
depolarization periods in the normal and NR neurons with and
without 100 µM lamotrigine (LTG) treatment.
47. Summary
• BP patient derived hippocampal Dentate Gyrus neurons are
molecularly and functionally hyper-excitability.
• Li+ can reverse the excitability BUT only in neurons from
patients that responded behavioral to Li+.
• BP patients have impaired mitochondria, likely required to supply
energy to impaired synapses. This impairment is reversed in Li+
responding patient neurons, but not the NRs. –we do not know if
the energy deficit is primary or secondary to the disease.
60. Fred Gage
• Leah Boyer
• Mike McConnell
• Yan Li
• Yangling Mu
• Diana Yu
Gong Chen
Jonathan Sebat
Shane McCarthy
Edward Cook
Gene Yeo
• Michael Lovci
• Jus%n Arnold
Eric Courchesne & ACE
John Kelsoe & PGBD
Mark Lawson
My Students:
• Anthony Simone
• Jessica Jou
• Chelsea Gelboin-Burkhart
• Ngoc Tran
• Sarah Sangar
• Sam Larkin
• Lisa Johnson
Ed Callaway
• Nicholas Wall
Konrad Hochedlinger
Salk Stem Cell Core
Travis Berggeron
Margaret Lutz
CIRM Fellow