Accelerating the Development and
Selection of Varieties (Theme 2)
Augusto Becerra Lopez-Lavalle
ISTRC-2012/CRP-RTB
25/09/2012
Banana Cassava Potato Sweetpotato Yam Other Tubers
Food Security Crops
Billion dollar industries
producing both food and industrial
products
OUR CROPs
Banana Cassava Potato Sweetpotato Yam Other Tubers
Food Security Crops
Billion dollar industries
Potentially lifting 100Ks small
farmers out of poverty
Emerging industries
OUR CROPs
Banana Cassava Potato Sweetpotato Yam Other Tubers
• Fresh • Fresh • Fresh • Fresh • Fresh • Fresh
OUR TARGETs FOR IMPROVEMENT
• Ripe
• Unripe
• Fiber
•Starch
•Ethanol
• Dry chips
• Starch
• Bioplastics
• Ethanol
• Culls
• Starch
• Culls
•Leaves
• Starch
• Ethanol
• Culls
• Starch
Theme Goal
• Undertake world-ranking plant biology
and crop improvement research …
• To support small holder farmers, by
expanding and diversifying the use of RTB
crops as renewable sources of …
• high-value food, feed and industrial
biomaterials (carbohydrate and fiber)
Science Challenges
• To stay at the cutting edge in the
successful RTB crop production for
food, feed and industrial
applications, strong linkage between basic
plant science with delivery of new tools
and genes for next-generation plant
breeding needs to by consolidated.
• To unravel novel metabolic processes in
RTB crops that enable the creation of new
market opportunities for small holder
farmers with access to added value
food, fiber and carbohydrate products
(i.e., high pVA or waxy starch).
Breeding
• We need to establish ………
• The current rate of yield increase by RTB
growers.
• How much of the gains are explain by plant
breeding…
• The level of research investment required to
double the genetic gain through improved:
• YIELD POTENTIAL + YIELD PROTECTION
Breeding
0
0.5
1
1.5
2
2.5
3
3.5
4
4.5
1950 1960 1970 1980 1990 2000 2010 2020 2030 2040 2050
RelativeYields
Years RTB germplasmavailable
Progress
Maintained
Increased
YIELD POTENTIAL + YIELD PROTECTION
Double Yields by 2050
Breeding
0
0.5
1
1.5
2
2.5
3
3.5
4
4.5
1950 1960 1970 1980 1990 2000 2010 2020 2030 2040 2050
RelativeYields
Years RTB germplasmavailable
Progress
Maintained
Increased
YIELD POTENTIAL + YIELD PROTECTION
Complete delivery
mechanism
Products and Product Lines 2012
YIELD POTENTIAL + YIELD PROTECTION
Complete delivery
mechanism
Technologies to
enable and exploit
limited inbreeding in
RTB breeding
Analytical
techniques and
procedures for a
Web based access
to NIRs scales
Bioinformatic tools
for functional
genomics studies
Breeding
tools
Products and Product Lines 2012
YIELD POTENTIAL + YIELD PROTECTION
Complete delivery
mechanism
Identification of
gene promoters for
efficient expression
of transgenes
Transfer of gene(s)
responsible for
whitefly resistance
from cassava into
other RTB crops
Trait
discovery
Products and Product Lines 2012
YIELD POTENTIAL + YIELD PROTECTION
Complete delivery
mechanism
Modern statistical
methodologies for
experiments and
surveys datasets
Variety
develop
Products and Product Lines 2013
YIELD POTENTIAL + YIELD PROTECTION
Complete delivery
mechanism
Quantify pollen
mediated gene flow
in vegetatively
propagated crops
Procedures for the
estimation of LD in
outbreeding
polyploids
Breeding
tools
Products and Product Lines 2013
YIELD POTENTIAL + YIELD PROTECTION
Complete delivery
mechanism
Global phenotyping
network for key
quality and root
traits (disease and
climate change)
Trait
discovery
Products and Product Lines 2013
YIELD POTENTIAL + YIELD PROTECTION
Complete delivery
mechanism
Common RTB Data
management
platforms
Variety
develop
Research strategy
Novel Starches
Sequence data mining
Functional specificity
Expression manipulation
GM
Starch enzymes & genes
(SS and GBSS)Natural genetic variation in
amylose vs. Amylopectine
properties
Chemical & physical
structure  properties
Final product attributes
Novel End Uses
Breeding and selection
Novel Next uses
NGS - Genotyping
Metabolic -profiling
Genome wide association
Omics
Novel multi traits
THANK YOU

Rtb theme 2 leader presentation nigeria 25 sep 2012

  • 1.
    Accelerating the Developmentand Selection of Varieties (Theme 2) Augusto Becerra Lopez-Lavalle ISTRC-2012/CRP-RTB 25/09/2012
  • 2.
    Banana Cassava PotatoSweetpotato Yam Other Tubers Food Security Crops Billion dollar industries producing both food and industrial products OUR CROPs
  • 3.
    Banana Cassava PotatoSweetpotato Yam Other Tubers Food Security Crops Billion dollar industries Potentially lifting 100Ks small farmers out of poverty Emerging industries OUR CROPs
  • 4.
    Banana Cassava PotatoSweetpotato Yam Other Tubers • Fresh • Fresh • Fresh • Fresh • Fresh • Fresh OUR TARGETs FOR IMPROVEMENT • Ripe • Unripe • Fiber •Starch •Ethanol • Dry chips • Starch • Bioplastics • Ethanol • Culls • Starch • Culls •Leaves • Starch • Ethanol • Culls • Starch
  • 5.
    Theme Goal • Undertakeworld-ranking plant biology and crop improvement research … • To support small holder farmers, by expanding and diversifying the use of RTB crops as renewable sources of … • high-value food, feed and industrial biomaterials (carbohydrate and fiber)
  • 6.
    Science Challenges • Tostay at the cutting edge in the successful RTB crop production for food, feed and industrial applications, strong linkage between basic plant science with delivery of new tools and genes for next-generation plant breeding needs to by consolidated. • To unravel novel metabolic processes in RTB crops that enable the creation of new market opportunities for small holder farmers with access to added value food, fiber and carbohydrate products (i.e., high pVA or waxy starch).
  • 7.
    Breeding • We needto establish ……… • The current rate of yield increase by RTB growers. • How much of the gains are explain by plant breeding… • The level of research investment required to double the genetic gain through improved: • YIELD POTENTIAL + YIELD PROTECTION
  • 8.
    Breeding 0 0.5 1 1.5 2 2.5 3 3.5 4 4.5 1950 1960 19701980 1990 2000 2010 2020 2030 2040 2050 RelativeYields Years RTB germplasmavailable Progress Maintained Increased YIELD POTENTIAL + YIELD PROTECTION Double Yields by 2050
  • 9.
    Breeding 0 0.5 1 1.5 2 2.5 3 3.5 4 4.5 1950 1960 19701980 1990 2000 2010 2020 2030 2040 2050 RelativeYields Years RTB germplasmavailable Progress Maintained Increased YIELD POTENTIAL + YIELD PROTECTION Complete delivery mechanism
  • 10.
    Products and ProductLines 2012 YIELD POTENTIAL + YIELD PROTECTION Complete delivery mechanism Technologies to enable and exploit limited inbreeding in RTB breeding Analytical techniques and procedures for a Web based access to NIRs scales Bioinformatic tools for functional genomics studies Breeding tools
  • 11.
    Products and ProductLines 2012 YIELD POTENTIAL + YIELD PROTECTION Complete delivery mechanism Identification of gene promoters for efficient expression of transgenes Transfer of gene(s) responsible for whitefly resistance from cassava into other RTB crops Trait discovery
  • 12.
    Products and ProductLines 2012 YIELD POTENTIAL + YIELD PROTECTION Complete delivery mechanism Modern statistical methodologies for experiments and surveys datasets Variety develop
  • 13.
    Products and ProductLines 2013 YIELD POTENTIAL + YIELD PROTECTION Complete delivery mechanism Quantify pollen mediated gene flow in vegetatively propagated crops Procedures for the estimation of LD in outbreeding polyploids Breeding tools
  • 14.
    Products and ProductLines 2013 YIELD POTENTIAL + YIELD PROTECTION Complete delivery mechanism Global phenotyping network for key quality and root traits (disease and climate change) Trait discovery
  • 15.
    Products and ProductLines 2013 YIELD POTENTIAL + YIELD PROTECTION Complete delivery mechanism Common RTB Data management platforms Variety develop
  • 16.
    Research strategy Novel Starches Sequencedata mining Functional specificity Expression manipulation GM Starch enzymes & genes (SS and GBSS)Natural genetic variation in amylose vs. Amylopectine properties Chemical & physical structure  properties Final product attributes Novel End Uses Breeding and selection Novel Next uses NGS - Genotyping Metabolic -profiling Genome wide association Omics Novel multi traits
  • 17.