Synovial biopsy provides tissue that can be used to better understand the pathophysiological mechanisms of arthritis through techniques like immunohistochemistry, electron microscopy, and molecular biology. It is not normally required for routine diagnosis but can help evaluate new treatment approaches. There are different types of synovial biopsies including needle biopsy, arthroscopic biopsy, and open surgical biopsy. Needle biopsy is the most common technique and samples are obtained from joints like the knee using a 14-gauge needle. Synovial biopsy helps diagnose conditions like infectious arthritis, autoimmune diseases like rheumatoid arthritis, and crystal-induced arthritides.
The document discusses minimal residual disease (MRD), which refers to small amounts of malignant cells that remain undetectable by conventional methods but can be detected using highly sensitive techniques like PCR. It provides an overview of techniques used for MRD detection in various hematologic malignancies, including morphology, immunophenotyping, cytogenetics, FISH, and PCR. The sensitivity and limitations of each technique is reviewed. Common genomic targets for MRD detection are discussed for several leukemias and lymphomas. The significance of accurately measuring MRD levels for prognosis, monitoring relapse risk, and guiding treatment is also summarized.
This document discusses various histological structures and lesions that can mimic prostate carcinoma on biopsy. It describes entities such as atrophy, basal cell hyperplasia, adenosis, non-specific granulomatous prostatitis, and clear cell cribriform hyperplasia that resemble low or high-grade prostate cancer. Distinguishing these mimickers from cancer relies on architectural features, cytology, immunohistochemistry, and the presence of basal cells. While some mimickers can be difficult to differentiate from cancer on limited biopsy sampling, correlation with clinical findings and use of immunohistochemical markers are important to arrive at an accurate diagnosis.
This document presents two case reports of hemophagocytic syndrome (HPS). HPS is a rare disorder characterized by uncontrolled phagocytosis of blood cells in the bone marrow. It can be secondary to infections, malignancies, autoimmune diseases, or immunodeficiencies. The first case report describes an 11-month old child with HPS associated with Plasmodium falciparum malaria infection. The second case report involves a 17-year old male with HPS complicating tuberculosis infection. Both patients exhibited cytopenias, hepatosplenomegaly, and hemophagocytosis identified in bone marrow samples. The malaria patient recovered with antimalarial treatment, while the tuberculosis patient responded to antitub
Immunohistochemistry of Thyroid Gland tumorhome education
Galectin-3 and HBME-1 are highly sensitive and specific molecular markers for diagnosing thyroid cancer. Galectin-3 has a sensitivity of 93.7% and specificity of 83% for differentiating benign from malignant thyroid tumors, while HBME-1 has a sensitivity of 81% and specificity of 84.7% for diagnosing thyroid cancer. Using a panel of multiple molecular markers together can provide nearly 100% accuracy in diagnosing thyroid cancer, as individual markers may not be expressed in all tumors.
Tensins are proteins located at focal adhesions that link integrins to the actin cytoskeleton. There are four tensin family members that play important roles in cell adhesion, migration, proliferation and survival. Tensins help maintain tissue integrity but can also contribute to disease when their expression is altered, as seen in various cancers where different tensins may act as either tumor suppressors or oncogenes depending on the context. The functions and regulation of individual tensins can vary between tissues and disease states.
This document discusses cryoglobulinemic vasculitis and renal disease. It begins with objectives and history of cryoglobulins and cryoglobulinemic disease. It then covers definitions, classifications, etiology, epidemiology, pathogenesis, clinical features, diagnosis, prognosis, and management of cryoglobulinemic vasculitis. The pathogenesis involves cryoglobulin precipitation, immune complex formation, and inflammation mediated by infections like HCV, autoimmune diseases, and malignancies. Clinical features commonly include purpura, arthralgia, weakness, and renal involvement.
Monitoring of Minimal Residual Disease Principles and Applicationsspa718
This document discusses methods for monitoring minimal residual disease (MRD) in acute myeloid leukemia (AML) patients, including polymerase chain reaction (PCR) to detect leukemic fusion genes or mutations, and multiparameter flow cytometry (FCM) to identify aberrant myeloid precursors. MRD detection can provide prognostic information, help evaluate treatment effectiveness, guide risk-adjusted therapy, and predict relapse. Both methods have advantages and limitations, and more standardization is needed. MRD remains a promising tool to improve AML patient outcomes by guiding personalized therapy.
Synovial biopsy provides tissue that can be used to better understand the pathophysiological mechanisms of arthritis through techniques like immunohistochemistry, electron microscopy, and molecular biology. It is not normally required for routine diagnosis but can help evaluate new treatment approaches. There are different types of synovial biopsies including needle biopsy, arthroscopic biopsy, and open surgical biopsy. Needle biopsy is the most common technique and samples are obtained from joints like the knee using a 14-gauge needle. Synovial biopsy helps diagnose conditions like infectious arthritis, autoimmune diseases like rheumatoid arthritis, and crystal-induced arthritides.
The document discusses minimal residual disease (MRD), which refers to small amounts of malignant cells that remain undetectable by conventional methods but can be detected using highly sensitive techniques like PCR. It provides an overview of techniques used for MRD detection in various hematologic malignancies, including morphology, immunophenotyping, cytogenetics, FISH, and PCR. The sensitivity and limitations of each technique is reviewed. Common genomic targets for MRD detection are discussed for several leukemias and lymphomas. The significance of accurately measuring MRD levels for prognosis, monitoring relapse risk, and guiding treatment is also summarized.
This document discusses various histological structures and lesions that can mimic prostate carcinoma on biopsy. It describes entities such as atrophy, basal cell hyperplasia, adenosis, non-specific granulomatous prostatitis, and clear cell cribriform hyperplasia that resemble low or high-grade prostate cancer. Distinguishing these mimickers from cancer relies on architectural features, cytology, immunohistochemistry, and the presence of basal cells. While some mimickers can be difficult to differentiate from cancer on limited biopsy sampling, correlation with clinical findings and use of immunohistochemical markers are important to arrive at an accurate diagnosis.
This document presents two case reports of hemophagocytic syndrome (HPS). HPS is a rare disorder characterized by uncontrolled phagocytosis of blood cells in the bone marrow. It can be secondary to infections, malignancies, autoimmune diseases, or immunodeficiencies. The first case report describes an 11-month old child with HPS associated with Plasmodium falciparum malaria infection. The second case report involves a 17-year old male with HPS complicating tuberculosis infection. Both patients exhibited cytopenias, hepatosplenomegaly, and hemophagocytosis identified in bone marrow samples. The malaria patient recovered with antimalarial treatment, while the tuberculosis patient responded to antitub
Immunohistochemistry of Thyroid Gland tumorhome education
Galectin-3 and HBME-1 are highly sensitive and specific molecular markers for diagnosing thyroid cancer. Galectin-3 has a sensitivity of 93.7% and specificity of 83% for differentiating benign from malignant thyroid tumors, while HBME-1 has a sensitivity of 81% and specificity of 84.7% for diagnosing thyroid cancer. Using a panel of multiple molecular markers together can provide nearly 100% accuracy in diagnosing thyroid cancer, as individual markers may not be expressed in all tumors.
Tensins are proteins located at focal adhesions that link integrins to the actin cytoskeleton. There are four tensin family members that play important roles in cell adhesion, migration, proliferation and survival. Tensins help maintain tissue integrity but can also contribute to disease when their expression is altered, as seen in various cancers where different tensins may act as either tumor suppressors or oncogenes depending on the context. The functions and regulation of individual tensins can vary between tissues and disease states.
This document discusses cryoglobulinemic vasculitis and renal disease. It begins with objectives and history of cryoglobulins and cryoglobulinemic disease. It then covers definitions, classifications, etiology, epidemiology, pathogenesis, clinical features, diagnosis, prognosis, and management of cryoglobulinemic vasculitis. The pathogenesis involves cryoglobulin precipitation, immune complex formation, and inflammation mediated by infections like HCV, autoimmune diseases, and malignancies. Clinical features commonly include purpura, arthralgia, weakness, and renal involvement.
Monitoring of Minimal Residual Disease Principles and Applicationsspa718
This document discusses methods for monitoring minimal residual disease (MRD) in acute myeloid leukemia (AML) patients, including polymerase chain reaction (PCR) to detect leukemic fusion genes or mutations, and multiparameter flow cytometry (FCM) to identify aberrant myeloid precursors. MRD detection can provide prognostic information, help evaluate treatment effectiveness, guide risk-adjusted therapy, and predict relapse. Both methods have advantages and limitations, and more standardization is needed. MRD remains a promising tool to improve AML patient outcomes by guiding personalized therapy.
Unusual type and site of Lymphoma(Extranodal Lymphoma) Dr.Argha BaruahArgha Baruah
This document discusses several unusual types and sites of lymphoma. It begins by defining extranodal lymphoma and primary vs secondary extranodal lymphoma. It then describes several specific lymphoma subtypes in more detail, including their typical age, site of involvement, characteristics, immunophenotype, and prognosis. These include primary CNS lymphoma, extranodal NK/T-cell lymphoma, plasmablastic lymphoma, EBV-positive mucocutaneous ulcer, primary mediastinal large B-cell lymphoma, and others.
Small round cell tumors are a group of highly aggressive cancers composed of small, undifferentiated cells. The diagnostic approach involves clinical findings, imaging, pathology, and molecular genetics testing. Key small round cell tumors in pediatric patients include Ewing sarcoma, neuroblastoma, nephroblastoma, rhabdomyosarcoma, medulloblastoma, retinoblastoma, and lymphoblastic lymphoma. Immunohistochemistry and genetic testing are used to determine the specific tumor type to help guide treatment.
TAFI (thrombin-activable fibrinolysis inhibitor) plays a role in inhibiting the fibrinolytic system. It is activated by thrombin and cleaves carboxy-terminal residues on partially degraded fibrin, inhibiting plasminogen binding and activation and fibrinolysis. Variations in TAFI levels between individuals are strongly associated with single nucleotide polymorphisms in the regulatory region of the TAFI gene. TAFI is a potential target for modulating fibrinolysis and treatment of thrombotic disorders.
Squash cytology of cns paediatric tumoursSumanth Deva
This document provides an overview of squash cytology techniques for diagnosing pediatric central nervous system tumors, describing the smear patterns and key cytological features of common tumor types like medulloblastoma, atypical teratoid/rhabdoid tumors, choroid plexus papilloma, and choroid plexus carcinoma. Squash cytology allows rapid examination of biopsy samples during neurosurgery to aid diagnosis and surgical decision making.
Immunohistochemistry in diagnosis of soft tissue tumours seminarPannaga Kumar
This document discusses immunohistochemistry in the diagnosis of soft tissue tumors. It begins by introducing soft tissue and the classification of soft tissue tumors. It then discusses various ancillary techniques used, focusing on immunohistochemistry. It provides details on common markers used to identify muscle, neural, melanocytic, endothelial and other types of differentiation. It discusses the applications and diagnostic utility of various markers for different tumor types. In summary, the document is a comprehensive overview of immunohistochemistry techniques and markers useful in the diagnosis and classification of soft tissue tumors.
Muscle biopsy is an essential test for assessing patients with suspected myopathies. It provides valuable information about muscle fiber morphology, pathology distribution, and can help distinguish between neurogenic and myopathic processes. Key diagnostic features on biopsy can confirm or clarify the clinical diagnosis. Proper biopsy technique and handling of the sample are important for optimal histological and molecular analysis.
This document provides an overview of recent updates to the WHO classification of central nervous system tumors based on the 2016 guidelines. Key points include:
- Incorporation of molecular parameters like IDH, ATRX, and 1p/19q status into tumor classifications to improve diagnostic accuracy.
- Diffuse gliomas are now classified based on shared genetic drivers rather than histology alone. Entities like oligoastrocytoma are discouraged.
- Newly recognized entities include epithelioid glioblastoma and glioblastoma with a primitive neuronal component showing MYC/MYCN amplification.
- The diagnosis of oligodendroglioma now requires both IDH mutation and 1p/
This document provides information about muscle biopsy procedures and findings. It describes the normal anatomy and histology of skeletal muscle. Common indications for muscle biopsy include weakness, elevated enzymes, and suspected hereditary or acquired myopathies. Proper biopsy technique and sample processing are outlined. A variety of stains are used to examine muscle fiber morphology, inclusions, inflammation, vacuoles, and other abnormalities. Common myopathic patterns are presented along with the diseases they may indicate.
1) The document discusses various precancerous lesions of the colon and rectum, including adenomas, hyperplastic polyps, sessile serrated lesions, and traditional serrated adenomas.
2) It describes the histological features and progression of these lesions, noting that sessile serrated lesions and traditional serrated adenomas have a significant malignant potential, whereas hyperplastic polyps have a very low malignant potential.
3) Two pathways of colorectal carcinogenesis are discussed: the classic adenoma-carcinoma sequence and the serrated neoplastic pathway, which involves certain serrated polyps.
The document discusses the development and benefits of the Milan System for Reporting Salivary Gland Cytopathology. It aims to standardize terminology for salivary gland FNA reports which previously lacked uniformity. The system categorizes specimens as non-diagnostic, non-neoplastic, atypia of undetermined significance, neoplastic (benign or uncertain malignant potential), suspicious for malignancy, or malignant. It is intended to improve communication between pathologists and clinicians, enhance patient care, and facilitate research by allowing standardized data collection across institutions. While validation is ongoing, the system provides a practical framework for uniform reporting of salivary gland cytology.
Diffuse large B-cell lymphoma (DLBCL) is the most common type of non-Hodgkin lymphoma, making up 30-40% of cases. DLBCL is an aggressive or intermediate-grade lymphoma characterized by large malignant B cells. Risk factors include family history of lymphoma, autoimmune disease, HIV/HCV infection, and high body mass index. Treatment involves chemotherapy such as R-CHOP along with radiation or stem cell transplant depending on risk factors and age. Prognosis depends on factors like stage and the international prognostic index, with 5-year survival rates around 46% on average.
Myelodysplastic syndrome according to WHO 2016Madhuri Reddy
The document defines myelodysplastic syndromes as a group of clonal stem cell diseases characterized by cytopenia, dysplasia in one or more myeloid lineages, ineffective hematopoiesis, recurrent genetic abnormalities, and an increased risk of developing acute myeloid leukemia. It discusses the epidemiology, etiology, pathophysiology, cytogenetics, morphological features, clinical features, WHO classification, differential diagnosis, variants, immunophenotyping, management, and prognosis of MDS. The document provides details on the definition, evaluation, classification, genetic abnormalities, and clinical manifestations of myelodysplastic syndromes.
The document summarizes recent advances in Hodgkin's lymphoma. It discusses the history and classification of Hodgkin's lymphoma. It covers immunophenotype markers, involvement of Epstein-Barr virus, genetic changes in Hodgkin-Reed-Sternberg cells, the tumor microenvironment, microRNAs, and mechanisms of chemoresistance. Novel therapies discussed include monoclonal antibodies targeting CD20 and CD30.
Tumour markers can play a crucial role in detecting cancer and assessing response to therapy. They are substances produced either by tumour cells or by the body in response to cancer. Oncoproteins are proteins encoded by oncogenes which normally maintain a fine balance between cell proliferation and differentiation but become permanently activated in cancer, stimulating cell growth. Elevated levels of various oncoproteins and other tumour markers can be detected in blood and other body fluids, serving as biomarkers for early cancer detection and prediction of prognosis. Common tumour markers discussed include AFP, CEA, CA19-9, CA15-3, CA125, and proteins associated with growth factors, receptors, and cellular signalling pathways.
The document summarizes the International Academy of Cytology (IAC) System for classifying breast malignancy based on fine-needle aspiration cytology (FNAC) results. The system was developed at a meeting in Yokohama in 2016. It aims to standardize breast cytology reporting to improve diagnosis and patient management. The system categorizes FNAC results as insufficient, benign, atypical, suspicious of malignancy, or malignant, with associated risks of malignancy. Cytological features and management recommendations are provided for each category. The goal is to link cytology reports to optimal breast care.
Immunohistochemistry is a technique that detects antigens in tissue sections using antibody binding. It combines histology, immunology, and biochemistry to identify specific tissue components through antigen-antibody reactions tagged with visible labels. The principle involves visualizing antigen-antibody interactions in tissue. It is widely used for cancer diagnosis and prognosis by identifying tumor-specific antigens. Immunohistochemistry can determine the histological origin of non-differentiated tumors, characterize primary sites of cancers, and provide prognostic information to help guide therapy.
Giant cell lesions of bone include both reactive and neoplastic conditions characterized by the presence of multinucleated giant cells. Reactive giant cell lesions include giant cell reparative granuloma and brown tumor of hyperparathyroidism. Benign neoplastic giant cell lesions include giant cell tumor and aneurysmal bone cyst. Giant cell tumor is the most common, occurring most frequently in long bones of the extremities in young and middle aged adults. Histologically it is characterized by uniformly distributed osteoclast-like giant cells and mononuclear stromal cells that express RANKL.
Acute lymphoblastic leukemia (ALL) is a cancer of the lymphoid cells in the bone marrow. There are two main types of acute leukemia - ALL and AML. ALL is further classified using the FAB or WHO systems and is most common in children under 5 years old. The disease involves a proliferation of lymphoblasts in the bone marrow. Microscopically, ALL blasts can be classified as L1, L2, or L3 depending on their size, shape, and other characteristics. Immunophenotyping and cytogenetic testing are also used in the diagnosis and classification of ALL. Presenting symptoms are non-specific and related to low blood cell counts.
The document summarizes current diagnosis and treatment strategies for neuroendocrine tumors. It discusses the classification and grading of neuroendocrine tumors based on primary tumor site and biomarkers like Ki67. Imaging techniques like octreoscan, MIBG scintigraphy, and PET using tracers like 18F-DOPA and 68Ga-DOTA-octreotide are described. Treatment options discussed include surgery, medical therapies like somatostatin analogs, chemotherapy, targeted radionuclide therapy using 177Lu-DOTA-octreotate and peptide receptor radionuclide therapy.
This document summarizes a presentation on the management of primary central nervous system lymphoma. It discusses the epidemiology, pathogenesis, clinical features, investigations including imaging and pathology, prognostic factors, treatment including chemotherapy protocols and radiation therapy techniques, and a review of literature on clinical trials. The review of literature summarizes 11 key studies comparing outcomes of different chemotherapy regimens, use of whole brain radiation therapy, and impact on survival and neurotoxicity.
Unusual type and site of Lymphoma(Extranodal Lymphoma) Dr.Argha BaruahArgha Baruah
This document discusses several unusual types and sites of lymphoma. It begins by defining extranodal lymphoma and primary vs secondary extranodal lymphoma. It then describes several specific lymphoma subtypes in more detail, including their typical age, site of involvement, characteristics, immunophenotype, and prognosis. These include primary CNS lymphoma, extranodal NK/T-cell lymphoma, plasmablastic lymphoma, EBV-positive mucocutaneous ulcer, primary mediastinal large B-cell lymphoma, and others.
Small round cell tumors are a group of highly aggressive cancers composed of small, undifferentiated cells. The diagnostic approach involves clinical findings, imaging, pathology, and molecular genetics testing. Key small round cell tumors in pediatric patients include Ewing sarcoma, neuroblastoma, nephroblastoma, rhabdomyosarcoma, medulloblastoma, retinoblastoma, and lymphoblastic lymphoma. Immunohistochemistry and genetic testing are used to determine the specific tumor type to help guide treatment.
TAFI (thrombin-activable fibrinolysis inhibitor) plays a role in inhibiting the fibrinolytic system. It is activated by thrombin and cleaves carboxy-terminal residues on partially degraded fibrin, inhibiting plasminogen binding and activation and fibrinolysis. Variations in TAFI levels between individuals are strongly associated with single nucleotide polymorphisms in the regulatory region of the TAFI gene. TAFI is a potential target for modulating fibrinolysis and treatment of thrombotic disorders.
Squash cytology of cns paediatric tumoursSumanth Deva
This document provides an overview of squash cytology techniques for diagnosing pediatric central nervous system tumors, describing the smear patterns and key cytological features of common tumor types like medulloblastoma, atypical teratoid/rhabdoid tumors, choroid plexus papilloma, and choroid plexus carcinoma. Squash cytology allows rapid examination of biopsy samples during neurosurgery to aid diagnosis and surgical decision making.
Immunohistochemistry in diagnosis of soft tissue tumours seminarPannaga Kumar
This document discusses immunohistochemistry in the diagnosis of soft tissue tumors. It begins by introducing soft tissue and the classification of soft tissue tumors. It then discusses various ancillary techniques used, focusing on immunohistochemistry. It provides details on common markers used to identify muscle, neural, melanocytic, endothelial and other types of differentiation. It discusses the applications and diagnostic utility of various markers for different tumor types. In summary, the document is a comprehensive overview of immunohistochemistry techniques and markers useful in the diagnosis and classification of soft tissue tumors.
Muscle biopsy is an essential test for assessing patients with suspected myopathies. It provides valuable information about muscle fiber morphology, pathology distribution, and can help distinguish between neurogenic and myopathic processes. Key diagnostic features on biopsy can confirm or clarify the clinical diagnosis. Proper biopsy technique and handling of the sample are important for optimal histological and molecular analysis.
This document provides an overview of recent updates to the WHO classification of central nervous system tumors based on the 2016 guidelines. Key points include:
- Incorporation of molecular parameters like IDH, ATRX, and 1p/19q status into tumor classifications to improve diagnostic accuracy.
- Diffuse gliomas are now classified based on shared genetic drivers rather than histology alone. Entities like oligoastrocytoma are discouraged.
- Newly recognized entities include epithelioid glioblastoma and glioblastoma with a primitive neuronal component showing MYC/MYCN amplification.
- The diagnosis of oligodendroglioma now requires both IDH mutation and 1p/
This document provides information about muscle biopsy procedures and findings. It describes the normal anatomy and histology of skeletal muscle. Common indications for muscle biopsy include weakness, elevated enzymes, and suspected hereditary or acquired myopathies. Proper biopsy technique and sample processing are outlined. A variety of stains are used to examine muscle fiber morphology, inclusions, inflammation, vacuoles, and other abnormalities. Common myopathic patterns are presented along with the diseases they may indicate.
1) The document discusses various precancerous lesions of the colon and rectum, including adenomas, hyperplastic polyps, sessile serrated lesions, and traditional serrated adenomas.
2) It describes the histological features and progression of these lesions, noting that sessile serrated lesions and traditional serrated adenomas have a significant malignant potential, whereas hyperplastic polyps have a very low malignant potential.
3) Two pathways of colorectal carcinogenesis are discussed: the classic adenoma-carcinoma sequence and the serrated neoplastic pathway, which involves certain serrated polyps.
The document discusses the development and benefits of the Milan System for Reporting Salivary Gland Cytopathology. It aims to standardize terminology for salivary gland FNA reports which previously lacked uniformity. The system categorizes specimens as non-diagnostic, non-neoplastic, atypia of undetermined significance, neoplastic (benign or uncertain malignant potential), suspicious for malignancy, or malignant. It is intended to improve communication between pathologists and clinicians, enhance patient care, and facilitate research by allowing standardized data collection across institutions. While validation is ongoing, the system provides a practical framework for uniform reporting of salivary gland cytology.
Diffuse large B-cell lymphoma (DLBCL) is the most common type of non-Hodgkin lymphoma, making up 30-40% of cases. DLBCL is an aggressive or intermediate-grade lymphoma characterized by large malignant B cells. Risk factors include family history of lymphoma, autoimmune disease, HIV/HCV infection, and high body mass index. Treatment involves chemotherapy such as R-CHOP along with radiation or stem cell transplant depending on risk factors and age. Prognosis depends on factors like stage and the international prognostic index, with 5-year survival rates around 46% on average.
Myelodysplastic syndrome according to WHO 2016Madhuri Reddy
The document defines myelodysplastic syndromes as a group of clonal stem cell diseases characterized by cytopenia, dysplasia in one or more myeloid lineages, ineffective hematopoiesis, recurrent genetic abnormalities, and an increased risk of developing acute myeloid leukemia. It discusses the epidemiology, etiology, pathophysiology, cytogenetics, morphological features, clinical features, WHO classification, differential diagnosis, variants, immunophenotyping, management, and prognosis of MDS. The document provides details on the definition, evaluation, classification, genetic abnormalities, and clinical manifestations of myelodysplastic syndromes.
The document summarizes recent advances in Hodgkin's lymphoma. It discusses the history and classification of Hodgkin's lymphoma. It covers immunophenotype markers, involvement of Epstein-Barr virus, genetic changes in Hodgkin-Reed-Sternberg cells, the tumor microenvironment, microRNAs, and mechanisms of chemoresistance. Novel therapies discussed include monoclonal antibodies targeting CD20 and CD30.
Tumour markers can play a crucial role in detecting cancer and assessing response to therapy. They are substances produced either by tumour cells or by the body in response to cancer. Oncoproteins are proteins encoded by oncogenes which normally maintain a fine balance between cell proliferation and differentiation but become permanently activated in cancer, stimulating cell growth. Elevated levels of various oncoproteins and other tumour markers can be detected in blood and other body fluids, serving as biomarkers for early cancer detection and prediction of prognosis. Common tumour markers discussed include AFP, CEA, CA19-9, CA15-3, CA125, and proteins associated with growth factors, receptors, and cellular signalling pathways.
The document summarizes the International Academy of Cytology (IAC) System for classifying breast malignancy based on fine-needle aspiration cytology (FNAC) results. The system was developed at a meeting in Yokohama in 2016. It aims to standardize breast cytology reporting to improve diagnosis and patient management. The system categorizes FNAC results as insufficient, benign, atypical, suspicious of malignancy, or malignant, with associated risks of malignancy. Cytological features and management recommendations are provided for each category. The goal is to link cytology reports to optimal breast care.
Immunohistochemistry is a technique that detects antigens in tissue sections using antibody binding. It combines histology, immunology, and biochemistry to identify specific tissue components through antigen-antibody reactions tagged with visible labels. The principle involves visualizing antigen-antibody interactions in tissue. It is widely used for cancer diagnosis and prognosis by identifying tumor-specific antigens. Immunohistochemistry can determine the histological origin of non-differentiated tumors, characterize primary sites of cancers, and provide prognostic information to help guide therapy.
Giant cell lesions of bone include both reactive and neoplastic conditions characterized by the presence of multinucleated giant cells. Reactive giant cell lesions include giant cell reparative granuloma and brown tumor of hyperparathyroidism. Benign neoplastic giant cell lesions include giant cell tumor and aneurysmal bone cyst. Giant cell tumor is the most common, occurring most frequently in long bones of the extremities in young and middle aged adults. Histologically it is characterized by uniformly distributed osteoclast-like giant cells and mononuclear stromal cells that express RANKL.
Acute lymphoblastic leukemia (ALL) is a cancer of the lymphoid cells in the bone marrow. There are two main types of acute leukemia - ALL and AML. ALL is further classified using the FAB or WHO systems and is most common in children under 5 years old. The disease involves a proliferation of lymphoblasts in the bone marrow. Microscopically, ALL blasts can be classified as L1, L2, or L3 depending on their size, shape, and other characteristics. Immunophenotyping and cytogenetic testing are also used in the diagnosis and classification of ALL. Presenting symptoms are non-specific and related to low blood cell counts.
The document summarizes current diagnosis and treatment strategies for neuroendocrine tumors. It discusses the classification and grading of neuroendocrine tumors based on primary tumor site and biomarkers like Ki67. Imaging techniques like octreoscan, MIBG scintigraphy, and PET using tracers like 18F-DOPA and 68Ga-DOTA-octreotide are described. Treatment options discussed include surgery, medical therapies like somatostatin analogs, chemotherapy, targeted radionuclide therapy using 177Lu-DOTA-octreotate and peptide receptor radionuclide therapy.
This document summarizes a presentation on the management of primary central nervous system lymphoma. It discusses the epidemiology, pathogenesis, clinical features, investigations including imaging and pathology, prognostic factors, treatment including chemotherapy protocols and radiation therapy techniques, and a review of literature on clinical trials. The review of literature summarizes 11 key studies comparing outcomes of different chemotherapy regimens, use of whole brain radiation therapy, and impact on survival and neurotoxicity.
5-year survival of GCP after radical procedures
significantly depended on: 1) PT “early-invasive
cancer”; 2) PT N0--N12; 3) Cell Ratio Factors; 4) blood
cell circuit; 5) biochemical factors; 6) hemostasis
system; 7) AT; 8) GC characteristics; 9) GC cell
dynamics; 10) tumor localization; 11) anthropometric
data; 12) surgery type. Best diagnosis and treatment
strategies for GC are: 1) screening and early detection
of GC; 2) availability of experienced abdominal
surgeons because of complexity of radical procedures;
3) aggressive en block surgery and adequate lymph
node dissection for completeness; 4) precise
prediction; 5) adjuvant chemoimmunotherapy for GCP
with unfavorable prognosis.
Evolution of treatment strategies of brain tumorsAnil Gupta
The document discusses the evolution of treatment strategies for brain gliomas. It begins by providing background on gliomas and their classification. It then discusses advances in surgery, including neuronavigation, fluorescent guided resection, and intraoperative imaging. It also covers the evolution of radiotherapy techniques from early 2D approaches to modern 3D conformal radiotherapy and intensity modulated radiotherapy. Adjuvant therapies like chemotherapy and targeted drugs are also mentioned. Overall the document traces the development of surgical and radiation based approaches for glioma treatment over time.
- Multiple myeloma is the second most common hematological malignancy and remains largely incurable despite improved treatments.
- Phenotypic profiling of plasma cells can identify distinct subclones within patients' bone marrow that often have different genomic profiles and drug sensitivities.
- Monitoring of minimal residual disease using sensitive techniques can identify patients with higher-risk subclones who may be at greater risk of relapse.
- Achieving the deepest possible response including elimination of all detectable minimal residual disease may be needed for long-term disease control or cure.
Flow cytometry can be used for a variety of applications including medical research, diagnostics, and basic science. It allows for precise quantification of multiple antigens on individual cells through fluorescent labeling and detection. Key uses of flow cytometry include cell counting, sorting, analysis of characteristics and function, detection of microorganisms, biomarker analysis, and protein engineering detection. It is a routine technique in research, clinical practice, and clinical trials.
This study analyzed mutations in the von Hippel-Lindau (VHL) gene in 67 cases of renal cell carcinoma (RCC) to determine if VHL mutations could help distinguish between RCC subtypes. Single strand conformational polymorphism analysis and sequencing identified VHL mutations in RCC samples. Exon 3 mutations were found primarily in conventional (clear cell) RCC and correlated with more aggressive tumor phenotypes. Mutations were absent in papillary RCC and oncocytoma samples. VHL mutations were found to help distinguish conventional RCC from chromophobe RCC showing clear cells, serving as an adjunct to histological diagnosis of RCC subtypes.
This document discusses immunohistochemistry (IHC), which combines immunology, histology, and chemistry to identify tissue antigens using antibodies. IHC allows identification of cell types and origins. The document outlines the principles and history of IHC, the IHC process, common markers used to identify tissues like epithelial, mesenchymal and hematopoietic tissues. Examples of IHC use in identifying lung cancer subtypes, gastrointestinal cancers, breast cancer subtypes, and lymphoma subtypes are provided. In summary, the document provides a comprehensive overview of the field of immunohistochemistry.
My presentation delivered at the MS Symposium of the Jewish Hospital Berlin (https://www.juedisches-krankenhaus.de/home.html) held on 29 Nar 2023 at the Centrum Judaicum, Oranienburger Strasse, Berlin
Advances and Applications Enabled by Single Cell TechnologyQIAGEN
Over the past 5 years, single-cell genomics have become a powerful technology for studying small samples and rare cells, and for dissecting complex populations such as heterogeneous tumors. Single-cell technology is enabling many new insights into diverse research areas from oncology, immunology and microbiology to neuroscience, stem cell and developmental biology. This webinar introduces single-cell technology and summarizes the newest scientific applications in various research areas, all in the context of current literature.
This document discusses phenotypic heterogeneity in multiple myeloma and identifies distinct subclones within patient samples that have different genomic profiles, clonogenic potential, and drug sensitivity. FACS-sorted subclones from patient samples are often associated with different cytogenetic profiles. After drug exposure, minimal residual disease is a reservoir of chemoresistant cells that can lead to relapse. Achieving a complete response and eliminating minimal residual disease is associated with longer survival times.
This document discusses phenotypic heterogeneity in multiple myeloma and identifies distinct subclones within patient samples that have different genomic profiles, clonogenic potential, and drug sensitivity. FACS-sorted subclones from patient samples are often associated with different cytogenetic profiles. After drug exposure, minimal residual disease is a reservoir of chemoresistant cells that can lead to relapse. Achieving a complete response and eliminating minimal residual disease is associated with longer survival times.
*Watch the video at the end of the presentation
Seminar led by Dr. Xavier de la Cruz, ICREA Research Professor. Head of the Translational Bioinformatics in Neuroscience group of VHIR, at VHIR (22nd November 2012).
Content: The need to identify the pathological character of mutations may arise in different contexts in biomedical research. However, the methods available to address this problem essentially depend on the number of cases under analysis. When we work with only a few mutations we can use an artisan-like approach, where all information available on protein sequence, structure and function is manually retrieved and studied. However, when we need to characterize many variants, as can be the case in exome projects, faster methods are required to assess their pathogenicity. In my talk I will illustrate the principles underlying these two approaches with examples from the study of Fabry disease mutations, resulting from our collaborative work at the VHIR.
This is a PDF of a presentation given to the Radiation Oncology department at the University of Minnesota in October 2015. This PDF focuses on evaluation, management, and state-of-the-art approach to gliomas from a medical neuro-oncology perspective.
Epigenetics and cell fate in JIA and pulmonary fibrosis by Jim HagoodSystemic JIA Foundation
This document discusses the potential role of epigenetic mechanisms in idiopathic pulmonary fibrosis (IPF) and juvenile idiopathic arthritis (JIA). It outlines how epigenetic changes like DNA methylation and histone modifications can alter gene expression and cell phenotypes, contributing to diseases like IPF that involve remodeling of lung tissue. Studies have found differential methylation and expression of genes in IPF lung tissue. Epigenetic therapies targeting mechanisms like DNA methylation and histone acetylation may one day help treat IPF and other diseases. The document also discusses how epigenetics may contribute to autoimmunity and JIA, noting differences in T cell methylation profiles between JIA patients and controls.
This document provides a summary of neuroendocrine tumors (NETs):
- NETs arise from neuroendocrine cells throughout the body and can be functional or nonfunctional. Gastroenteropancreatic NETs are the most prevalent.
- NET incidence has increased 5-fold over the past 30 years. They are often advanced at diagnosis due to nonspecific symptoms and long diagnostic delays.
- Treatment options include surgery, chemotherapy, targeted therapies like somatostatin analogues, interferon, and newer agents inhibiting angiogenesis and mTOR pathways. Clinical trials are evaluating these targeted agents.
- The PI3K/Akt/mTOR pathway is frequently deregulated in cancers including NETs and represents a
Esophageal cancer cell dynamics were found to significantly depend on various factors through analysis of data from 553 patients who underwent surgery. Regression, neural network, and statistical analyses identified blood cell levels, biochemical markers, cancer characteristics like stage and type, and patient data like age and gender as significant factors affecting cancer cell behavior and patient survival rates. Adjuvant chemoimmunoradiotherapy was also found to improve 5-year survival compared to surgery alone.
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Dr. Nirupama Kothari runs a histopathology lab located in Jodhpur, India. The lab has 2 histopathologists, with one working full time and one part time. They process samples in-house and receive approximately 600-650 biopsy samples, 200-225 cytology samples, and 20-22 IHC samples per month. Their workload consists mainly of gastrointestinal, genitourinary, and breast biopsy samples, with 15% being oncology cases. They have 2 technical staff and classify samples as large biopsies, medium biopsies, small biopsies, and various types of cytology samples. Their areas of specialty include oncopathology, hematopathology, and
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The document discusses the importance of histology in endoscopy for providing precise diagnoses of abnormalities and lesions seen during endoscopic examinations. It covers the basic processes involved in biopsy collection and preparation of samples for microscopic examination, including fixation, processing, sectioning, staining, and the use of immunohistochemistry and other ancillary techniques to aid in diagnosis. Close collaboration between endoscopists and pathologists is emphasized to ensure high quality samples and diagnostic yield.
Cell Therapy Expansion and Challenges in Autoimmune DiseaseHealth Advances
There is increasing confidence that cell therapies will soon play a role in the treatment of autoimmune disorders, but the extent of this impact remains to be seen. Early readouts on autologous CAR-Ts in lupus are encouraging, but manufacturing and cost limitations are likely to restrict access to highly refractory patients. Allogeneic CAR-Ts have the potential to broaden access to earlier lines of treatment due to their inherent cost benefits, however they will need to demonstrate comparable or improved efficacy to established modalities.
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2. Neuroendocrine System
• Dispersed system of cells present in the CNS,
PNS and in many organs including classic
endocrine organs, the gut, pancreas, lung, etc.
3. What is a Neuroendocrine Cell?
• “Neuroendocrine” defines the peptide hormone –
producing cells
• These cells have in common the ability for Amine
Precursor (viz. DOPA and 5 OH tryptophan)
Uptake and Decarboxylation - APUD cells
4. Definition of NET
• Neuroendocrine tumors (NET) are neoplasms which
produce and secrete glycopeptide hormones and biogenic
amines and share neural – endocrine markers.
• GEP – NET most common of all NET’s
• Homogenous in terms of morphology but are heterogeneous
in terms of biological and clinical features
Bosman FT, et al. WHO Classification of Tumors of the Digestive System.Lyon, France: IARC Press;2010.
5. Gastroenteropancreatic
Neuroendocrine Tumor
• Standardized histopathological diagnosis and
classification on biopsy or surgical specimen -
basis for prognostic stratification, for optimal
selection of the respective tumor specific
imaging procedure and therapeutic option.
6. Nomenculature issues
1. Endocrine Vs Neuroendocrine
Neoplastic cells have features of neural and
epithelial cells.
WHO recommended term – Neuroendocrine.
2. Tumor vs neoplasm
Tumor = mass
Neoplasm = acurate
Widespread acceptance in many systems –
Neuroendocrine tumor (NET).
7. 3. Carcinoid tumor
Term does not adequately convey the potential for
malignant behavior that accompanies many of these
neoplasms.
However this term retains widespread colloquial
usage.
Nomenculature issues
9. Neuroendocrine Cell
Small Synaptic vesicle
Synaptophysin expression
Neurosecretory granule
with peptide secretion
Chromogranin A at NSG
membrane
N
Blood (Tumor
diameter is 3mm)
Biomarkers
11. Tissue Diagnosis: FNAC vs Core
Biopsy
Core Biopsy
• More tissue
• Higher comfort level to diagnose
malignancy
• IHC for diagnosis and grading
12. Diagnosis of NET
• Monotonous small round cells with uniform nuclei,
stippled chromatin (salt and pepper)
13. In 1971 Soga and Tazawa described 4 microscopic patterns:
1. Insular (nodular solid nests with peripheral invading cords)
NET - Microscopic Patterns
17. Markers of neuroendocrine
differentiation – IHC
Non Hormonal Markers
• Chromogranin- acidic proteins in
secretory granules. Type A, B, C
• Synaptophysin
• NSE
• PGP9.5, CD57, CD56, VMAT2
Hormonal markers –
Gastrin (G cells),
Somatostatin (D Cells),
Serotonin (E cells),
Glucagon (L cells)
Calcitonin
CgA
Synap
18. Role of CgA in Dx of NET
Benefits
• Integral part of the membrane of neurosecretory hormone
granules
• Can be detected in the secretory granules of most NET, both
symptomatic and asymptomatic
Taupenot L, Harper KL, O’Connor DT.N Engl J Med.2003;348:1134-1149
19. Role of CgA in Dx of NET
Limitations:
• Many NET of the large bowel and some of the appendix
primarily secrete CgB
• Dependent on no.of neurosecretory vesicles / cell
• CgA may be negative in poorly differentiated NET
20. Role of Synaptophysin in Dx of NET
Benefits:
• Expressed independently of
secretory granules
• Useful in identifying poorly
granulated and poorly
differentiated NET that may not
exhibit CgA
Chetty R et al. Arch.Pathol Lab Med 2008;132:1285-1289
Limitations:
• Expression is not limited to
neuroendocrine cells
21. Unknown primary
• For metastatic GEP-NET with unknown primary
evidence of specific transcription factors in addition to
hormones is important.
23. Islet 1 (IsI1) expression is a reliable marker for
pancreatic neuroendocrine tumors and their
metastases1
Liver mts
IsI1
1.Schmitt AM et al.Am J Surg Pathol.2008 Mar;32(3):420-5.
PNET – has liver / LN mets by the time of diagnosis
24. CDX2 as a marker of intestinal EC-cells and related
well-differentiated neuroendocrine tumors1
1. La Rosa S et al Virchows Arch.2004 Sep;445(3):248-54
CDX2
1. CDX2 - Positive in 90% of NET of ileum and appendix but
not in pulmonary NET
2. TTF -1 is expressed in 50% of bronchopulmonary NET but
only <2% of GEP - NET
25. Stomatostatin Receptors
• Somotostatin receptor (SSTR) are expressed on the
surface of Neoplastic Neuroendocrine cells
• 5 types of SST receptors
• SSTR 2A has greatest binding affinity to somatostatin
analogues
26. sstr2 in NETs
• Almost 40% of the patients with NET have very
strong staining for sstr2
Missiaglia E, et al. J Clinic Oncol.2010, 28(2):245-255
27. SSTR IHC: 77% correlates with Octreotide
Scintigraphy
107 Cases (41 pre-operative samples)
Volante M.et al Mod Pathol.2007 Nov;20(11):1172-1182
28. Functionality issue of NET
• Functional NETs - defined based on the presence of
clinical symptoms due to excess hormone secretion by
the tumor
• Functional status of the tumor is defined by clinical
findings and not by pathologic appearance or IHC
profile (eg: carcinoid syndrome)
• Non functional NET’s – associated with symptoms
related to mass
29. • Pathologic diagnosis of functioning NETs should be
the same as for analogous nonfunctioning NETs of the
same anatomic site, with the descriptive functional
designation appended to the diagnosis when there is
knowledge of a clinical syndrome.
Functional status need not be included in the
pathology report
Functionality issue of NET
30. 0 24 48 72 96 120
0 24 48 72 96 120
Cumulative
Survival
Probability
Cumulative
Survival
Probability
Time of survival (months)
Time of survival (months)
Impact of histology, proliferation, &
stage on prognosis. P-NEN
St.l (108 pts)
St.ll (16 pts)
St.lll (54 pts)
St.lV (96 pts)
0 – 5% (152 pts)
>5 – 20% (63 pts)
>20% (22 pts)
Ki 67 levels
0 24 48 72 96 120
Cumulative
Survival
Probability
Time of survival (months)
WDET-B (51 pts)
WDET-U (56 pts)
WDEC (139 pts)
PDEC (28 pts)
WHO 2000 classification
TNM coding
Scarpa et al Mod Pathol 2010
31. NENs, NETs, NECs & MANECs of the GEP
Comparison of Classifications
Bosman FT, et al. WHO Classification of Tumours of the Digestive System. Lyon, France: IARC Press; 2010.
WHO 1980 WHO 2000 WHO 2010
Carcinoid WDET- Benign
Uncertain
WDEC
PDEC/ SCC
NET G1
NET G2
NET G3
NEC G3
Mucocarcinoid
Mixed carcinoid and
adenoca
Mixed exocrine
endocrine carcinoma
(MEEC)
Mixed adeno-
neuroendocrine
carcinoma (MANEC)
Pseudotumour
lesions
Tumour-like lesions Hyperplastic and
preneoplastic lesions
32. WHO 2010 Update
Classification, Staging, Prognosis
Working principles
– New classification – retains basic criteria of WHO 2000 classification
– All GI NET’s have a malignant potential
– Separation of histological grading & staging parameters
– “Neuroendocrine neoplasm/tumor” includes well and poorly
differentiated tumors
– Benign & low malignant highly diff NET – jointly referred as
Neuroendocrine tumors (G1(synonym for carcinoid) & G2)
– Well differentiated NET – G1,G2,G3
– Neuroendocrine Carcinoma – All poorly differentiated NET – G3(small
cell & large cell NEC)
34. Well differentiated NET - Histology
• Well - differentiated tumors have characteristic organoid
arrangement of the tumor cells, with nesting, trabecular or
gyriform patterns.
• Cells are uniform and produce abundant neurosecretory
granules, reflected in the strong and diffuse immunoexpression
of neuroendocrine markers Cg A and synaptophysin.
35. Poorly differentiated NET - Histology
• Poorly differentiated NETs less closely resemble non-
neoplastic neuroendocrine cells and have a more sheetlike
or diffuse architecture, irregular nuclei, and less cytoplasmic
granularity.
• Immunoexpression of neuro-endocrine markers is usually
more limited.
36. Can pathologists provide predictive
markers?
In a well or moderately differentiated NET, even in the
absence of a positive octreoscanTM , somatostatin
analogue therapy can have benefit
1. Zatelli MC et al. Horm Metab Res.2003.35(6):349-354; 2. Vezzosi D et al. Clin
Endocrinol (Oxf).2008,68(6): 904-911; 3. Vezzisi D et al.Eur J Endoscrinol.2005,
152(5):757-467.
Differentiation of well differentiated from poorly differentiated NET is the
most important pathological assessment as therapy defers
37. Grade versus differentiation of NET
Differentiation Grade
Well differentiated Low grade G1 – relatively indolent
Intermediate grade G2 - moderately
aggressive
High grade G3 – ext aggressive
Poorly differentiated High grade G3 – ext aggressive
•Grade refers to the inherent biologic aggressiveness of the tumor.
The proliferative index is inherently linked to the grade of NET
38. Mitotic Count
• The simplest method to determine the
proliferative index is to count mitotic figures, and
is necessary for complete pathology reports.
• The mitotic rate should be expressed based on
the number in 10 high power fields (2 mm2)
• A total of 50 fields (10 mm2) should be counted
39. Grading by Mitotic Counts
Rindi G et al. Circhows Arch (2007) 451:757 – 762
American Joint Committee On cancer.AJCC Cancer Staging System.Seventh Edition
41. Ki67 Counting
• Options to quantify Ki67
Systematically counting manually a defined number of
tumors cells (500 – 2000) and calculating the positive
percentage
Using a computerized digital image analysis system to
measure the positive percentage
A general “eyeballed” estimate of the percentage of
positive cells
• Proliferative rate - Provides significant prognostic
information for NET.
43. Ki 67
Cell block / Biopsy - Impossible to count mitotic figures in 40 – 50 / hpf.
Limited tumor tissue
Ki67 staining - more accurate
44. Grading of NET According to Ki67 index
The result should be reported as a single percentage, reflecting the
average of the regions counted, rather than a range of values.
45. 2010 WHO GI NET
Grading by Mitotic Counts vs Ki-67
G1 G2 G3
Morphology low grade low grade high grade
H & E
Mitotic count <2 2 - 20 >20
(10 HPF)
IHC
Ki67 index <2 3 – 20 >20
(% of positive cells per 100 counted cells)
47. MANEC
• Carcinoma phenotype that is recognizable as both
adenocarcinoma and neuroendocrine carcinoma
• Each component exceeds at least 30% of all
neoplastic cells
• Both components should be graded
• The identification in adenocarcinomas of scattered
neuroendocrine cells (<30%) does not qualify for
MANEC
48. Staging issues
• American Joint Committee on Cancer (AJCC) –
Anatomic site specific TNM staging for NETs
• European Neuroendocrine tumor society
(ENETS) (2006, 2007)
• Considerable over lap with some differences
between these two
• For Appendix & Pancreas – use both ENETS &
AJCC TNM staging as they differ in definitions of
T stages of tumor
50. NET - Minimum Pathology Data Set
• Diagnostic term
• Anatomic site of tumor
• Size (3 dimensions)
• Tumor histopathology
• Morphology, extent of invasion (T) IHC staining, multicentric
disease, non-ischemic tumor necrosis, vascular invasion,
perineural invasion, lymph node metastases (total no/ number
positive - N)
• Proliferative activity grade (mitotic rate, Ki67 index)
• TNM staging (specify staging used)
• Resection margins (positive/negative/close)
Am J Surg Pathol; 2010:34;300-313
51. SUMMARY
• All GEP NET’s are of low grade malignant potential
• Use WHO 2010 classification
• Evidence of neuroendocrine nature of the tumor (morphology
& IHC for neuroendocrine markers)
• Histological distinction between well and poorly differentiated
tumors
• Proliferation based grading (Ki67 mandatory for grading
(G1,G2,G3)
• PTNM staging with reference of specific system used