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OSAMA ASKOURA
Interpreting Chlamydomonas
reinhardtii Growth using Kelly’s
betting model
Slide
6
ROADMAP
Introduction
Related Work
Experimental Methods and Materials
Lab Experimentation
Results and Analysis
Conclusion
1
Slide
1 2
Slide
2 Fig 1: Bamboo (top), Algae (bottom)
SOURCE: Google Images
Algae could be used as a biofuel
Algae is one of fastest growing crops
on Earth.
Puts it in front with Bamboo plant.
3
Slide
2
Micro algae can be used in
biofuel production
Fig 2: Algae oil separation
SOURCE: Google Images
4
Effect of light frequency on the
growth of Chlamydomonas
reinhardtii micro-algae
Why Chlydomonas reinhardtii?
Micro-algae has fast growing rates.
Chlamydomonas reinhardtii Can double in 6 hours.
Makes it perfect for lab experimentation.
HYPOTHESIS
HYP#1:
Micro-algae responds to incident light frequency
HYP#2:
Micro-algae does not respond to incident light frequency
8
Slide
4
RELATED WORK
Kelly [2] related the growth of capital to the rate of information
Vejrazka, 2011 [5] investigated the effect of fluctuations on
microalgae. Their results showed decreased growth rates with higher
frequencies.
Vejrazka also showed that algal growth rates are higher under light-
limiting conditions
Cuaresmaa, 2011 [6] results show that horizontal bioreactors yield
higher culture biomass
9
Slide
5
EXPERIMENT
Total: 6 conditions
1 control
5 different frequencies
6 hour experiments
18 hour experiments
10
Slide
5
EXPERIMENTAL SETUP
Photon Flux Density (PFD) intensity 100-110 μmol photon /m2s
Incident light 470nm blue light
Duration
6 hours
18 hours
Light path 20 mm
11
Slide
6
Every
1-2 weeks
12
Slide
6
PROCEDURE
13
Slide
6 14
Slide
6 15
Slide
6 16
Slide
6 17
Slide
6 18
Slide
6 19
Slide
6 20
21
22
23
24
25
Slide
9
RESULTS AND ANALYSIS
26
Slide
11
FREQUENCY (Hz)
OPTICAL DENSITY (UNITLESS)
27
Frequency
(Hz)
Growth
Average of
3 samples
0 226
10 221
20 230.3
40 242
80 258
100 225
226
221
230.3
242
258
225
215
220
225
230
235
240
245
250
255
260
0 20 40 60 80 100 120
GROWTH/ABSORBANCE
FREQUENCY (Hz)
Growth of Algae under different light frequencies of
470 nm blue light ( 6 HOURS )
28
Frequency
(Hz)
Growth
Average of
3 samples
0 231
10 266.5
20 256
40 257
80 272.5
100 264
231
266.5
256 257
272.5
264
225
230
235
240
245
250
255
260
265
270
275
0 20 40 60 80 100 120
GROWTH/ABSORBANCE
FREQUENCY (Hz)
Growth of Algae under different light frequencies of
470 nm blue light ( 18 HOURS )
29
Frequency
(Hz)
Growth
Average of
3 samples
0 231
10 266.5
20 256
40 257
80 272.5
100 264
225
230
235
240
245
250
255
260
265
270
275
0 20 40 60 80 100 120
GROWTH/ABSORBANCE
FREQUENCY (Hz)
Growth of Algae under different light frequencies of
470 nm blue light ( 18 HOURS )
30
Slide
14
DISCUSSION & FUTURE WORK
31
Slide
16
Relationship is not linear
Could the algal response be related to Kelly’s betting?
Our results show that we can modify existing industrial
photobioreactor light patterns to increase growth at no cost.
32
Slide
17
SUMMARY
33
Slide
18
In our project we studied the effect of fluctuating light regimes on
the growth of Chlamydomonas reinhardtii micro-algae.
The growth of the algae was investigated against the light frequency
Our data has shown a clear and direct response by the algae to the
frequency
34
Slide
18
Thanks to Wheeler’s Microfluidics Laboratory at
University of Toronto for provision of laboratory
space, materials and equipment.
Acknowledgments
35
Slide
18
[1] C.E. Shannon A Mathematical Theory of Communication, B.S.T.J., Vol. 27, 379-656 (1948).
[2] Kelly, J.L A new interpretation of information rate, IRE Transactions, Vol. 2, 185-189 (1956).
[3] Hans C. P. Matthijs, Hans Balke, Udo M. van Hes, Bernd M. A. Kroon, Luuc R. Mur, Roger A. Binot Application of light-emitting
diodes in bioreactors: Flashing light effects and energy economy in algal culture (Chlorella pyrenoidosa), Biotechnology and
Bioengineering, Vol. 50, 98-107 (1996).
[4] Carl T. Bergstrom, Michael Lachiriaiiii Shannon Information and Biological Fitness, IEEE, Vol. 2, 185-189 (2004).
[5] Carsten Vejrazka, Marcel Janssen, Mathieu Streeand, Rene H. Wijels Photosynthetic Efficiency of Chlamydomonas reinhardtii
in Flashing Light, Wiley, 489, 2905-
2913 (2011).
[6] Mara Cuaresmaa,b, Marcel Janssena, Carlos Vlchezb, Ren H. Wijels Horizontal or vertical photobioreactors? How to improve
microalgae photosynthetic efficiency , Elsevier,
Vol. 2, 185-189 (2011).
References
36

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Molecular Communication for Bio Fuels

  • 1. OSAMA ASKOURA Interpreting Chlamydomonas reinhardtii Growth using Kelly’s betting model
  • 2. Slide 6 ROADMAP Introduction Related Work Experimental Methods and Materials Lab Experimentation Results and Analysis Conclusion 1
  • 4. Slide 2 Fig 1: Bamboo (top), Algae (bottom) SOURCE: Google Images Algae could be used as a biofuel Algae is one of fastest growing crops on Earth. Puts it in front with Bamboo plant. 3
  • 5. Slide 2 Micro algae can be used in biofuel production Fig 2: Algae oil separation SOURCE: Google Images 4
  • 6. Effect of light frequency on the growth of Chlamydomonas reinhardtii micro-algae
  • 8. Micro-algae has fast growing rates. Chlamydomonas reinhardtii Can double in 6 hours. Makes it perfect for lab experimentation.
  • 9. HYPOTHESIS HYP#1: Micro-algae responds to incident light frequency HYP#2: Micro-algae does not respond to incident light frequency 8
  • 10. Slide 4 RELATED WORK Kelly [2] related the growth of capital to the rate of information Vejrazka, 2011 [5] investigated the effect of fluctuations on microalgae. Their results showed decreased growth rates with higher frequencies. Vejrazka also showed that algal growth rates are higher under light- limiting conditions Cuaresmaa, 2011 [6] results show that horizontal bioreactors yield higher culture biomass 9
  • 11. Slide 5 EXPERIMENT Total: 6 conditions 1 control 5 different frequencies 6 hour experiments 18 hour experiments 10
  • 12. Slide 5 EXPERIMENTAL SETUP Photon Flux Density (PFD) intensity 100-110 μmol photon /m2s Incident light 470nm blue light Duration 6 hours 18 hours Light path 20 mm 11
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  • 29. Frequency (Hz) Growth Average of 3 samples 0 226 10 221 20 230.3 40 242 80 258 100 225 226 221 230.3 242 258 225 215 220 225 230 235 240 245 250 255 260 0 20 40 60 80 100 120 GROWTH/ABSORBANCE FREQUENCY (Hz) Growth of Algae under different light frequencies of 470 nm blue light ( 6 HOURS ) 28
  • 30. Frequency (Hz) Growth Average of 3 samples 0 231 10 266.5 20 256 40 257 80 272.5 100 264 231 266.5 256 257 272.5 264 225 230 235 240 245 250 255 260 265 270 275 0 20 40 60 80 100 120 GROWTH/ABSORBANCE FREQUENCY (Hz) Growth of Algae under different light frequencies of 470 nm blue light ( 18 HOURS ) 29
  • 31. Frequency (Hz) Growth Average of 3 samples 0 231 10 266.5 20 256 40 257 80 272.5 100 264 225 230 235 240 245 250 255 260 265 270 275 0 20 40 60 80 100 120 GROWTH/ABSORBANCE FREQUENCY (Hz) Growth of Algae under different light frequencies of 470 nm blue light ( 18 HOURS ) 30
  • 33. Slide 16 Relationship is not linear Could the algal response be related to Kelly’s betting? Our results show that we can modify existing industrial photobioreactor light patterns to increase growth at no cost. 32
  • 35. Slide 18 In our project we studied the effect of fluctuating light regimes on the growth of Chlamydomonas reinhardtii micro-algae. The growth of the algae was investigated against the light frequency Our data has shown a clear and direct response by the algae to the frequency 34
  • 36. Slide 18 Thanks to Wheeler’s Microfluidics Laboratory at University of Toronto for provision of laboratory space, materials and equipment. Acknowledgments 35
  • 37. Slide 18 [1] C.E. Shannon A Mathematical Theory of Communication, B.S.T.J., Vol. 27, 379-656 (1948). [2] Kelly, J.L A new interpretation of information rate, IRE Transactions, Vol. 2, 185-189 (1956). [3] Hans C. P. Matthijs, Hans Balke, Udo M. van Hes, Bernd M. A. Kroon, Luuc R. Mur, Roger A. Binot Application of light-emitting diodes in bioreactors: Flashing light effects and energy economy in algal culture (Chlorella pyrenoidosa), Biotechnology and Bioengineering, Vol. 50, 98-107 (1996). [4] Carl T. Bergstrom, Michael Lachiriaiiii Shannon Information and Biological Fitness, IEEE, Vol. 2, 185-189 (2004). [5] Carsten Vejrazka, Marcel Janssen, Mathieu Streeand, Rene H. Wijels Photosynthetic Efficiency of Chlamydomonas reinhardtii in Flashing Light, Wiley, 489, 2905- 2913 (2011). [6] Mara Cuaresmaa,b, Marcel Janssena, Carlos Vlchezb, Ren H. Wijels Horizontal or vertical photobioreactors? How to improve microalgae photosynthetic efficiency , Elsevier, Vol. 2, 185-189 (2011). References 36