The identification of Larvae, eggs
     and stomach contents…
 three studies of the application
  of barcodes on Mexican fish.

         Martha Elena Valdez Moreno
         Lourdes Vásquez Yeomans
         Carolina Quintal Lizama
         Dalia Cázarez Carrillo
         Elva Leyva
Contoy




                  Punta Allen
                                       Contoy




                       B. Chinchorro

            Xcalak
            Mahahual




                                                Banco Chinchorro


The
Mexican
Caribbean
                                       Xcalak
There exist many places of reef
fish spawning aggregations and
nursery areas of economic and
ecological importance.




                       To ensure the sustainability of
                       these areas as integrated
                       ecosystems and the possibility
                       to protect them, it is essential
                       to know…
What fish species are living in this region?
                     Where are they?

                           Adults




                                         Juvenile

                74 mm LT



                              22 mm LT
                                                         Larvae



         ?                          19 mm LT
                                                                  Eggs
                                               7 mm LT
Applying barcodes
we have found some interesting things…
Barcodes help us to identify the larvae…

69 new records for the Mexican Caribbean
only at larvae stage

       Awaous banana                       Pterois volitans*
          River goby                           Lionfish




                                              Cozumel
7



66 adult species with their larvae, previously unknown.

Family Gerreidae
Genus Eucinostomus




   E. jonesii               E. melanopterus                  E. gula


                          Using barcode




           The external morphology is not useful to identify these larvae…..
Osteology description Eucinostomus jonesii




                    clearing technique
Barcode allows us to know the distribution and the
time of the appearance of larvae
                                             species economically important




                                                  8-29/march/06
                                                    19/march/07
 Mycteroperca bonaci
    Black grouper




                                                  Aug/2005
   Thunnus atlanticus                             Mar/2006
       Blackfin tuna
7




Family Gerreidae
Genus Eucinostomus




   E. jonesii        E. melanopterus         E. gula




                                   Jan-Aug
All year
                                                  Mar-may

                         Xcalak
Egg distribution and the time of the appearance …
Regalecus glesne
    King of herrings




                                      Cozumel




                                                               9-Apr-2009




                                                 this fish could approach
                                                 the coast in the north of
the largest teleost fish of the world (8-10 m)   the Mexican Caribbean
                                                 for spawning or feeding
Lachnolaimus maximus
       Hogfish




                       Xcalak




        adults
                                1-30 Jan-2007
The case of…
Mycteroperca bonaci



  Life cycle of the
  species




             when and where the fishes spawn

               development and maintenance fisheries

                      propose protected areas
Lionfish
situation
    in
Mexico…
There are several reasons to be
concerned about their presence:

They have venomous spines that could            Is the first non-

injure divers.
                                                      native
                                                    marine fish
                                                established in the
                                                     Western
                                                North Atlantic and

Mexico has many places that are
                                                  Caribbean Sea.



world class scuba diving destination

Lionfish are predators that consume
“mexican” native reef species!!!
                                        What kind of prey do
                                        they eat in the mexican
                                        caribbean ?
Stomach contents




                   What can I do?




                       Use
                     Barcode…
Stomach contents analysis

                          Cozumel, Xcalak,Contoy island
122 Pterois volitans      Banco Chinchorro,Puerto Morelos
fixed in alcohol (2009)   Playa del Carmen




 35 fresh digestive tracts were Mahahual
 placed in ethylic alcohol 96%  Xcalak
 (2010)


                                                         90% showed a high degree of
                                                         digestion of the tissue

                          A total of 157 stomachs were
                          examined

                          only 144 had stomach
                          contents
                          We separated 330 prey items
Results

          170 sequences were compared with a
          reference library of DNA barcodes.



      125 sequences matched
         with fishes


     45 sequences matched
       with crustacean
Fish:
                     30 different species were identified (12 families)
                    5 new records for Mexican Caribbean
                     1 surprise….

                                                                              Gobidae*
          Apogonidae*



                                                           Coryphopterus eidolon           C. hyalinus
Apogon townsendi   Apogon maculatus
                                                                                                        
                                                             C. venezuelae                   C. thrix



 Apogon lachneri
                                                                                                 
                   Astrapogon puncticulatus
                                                                                   C. tortugae
            
Apogon mosavi
                                                              Priolepis hipoliti                 Lythypnus sp
                             *greatest number of species
Tripterygiidae

                 Enneanectes altivelis          Enneanectes boehlkei




 Labrisomidae
                                                                         mmm…delicius!


                 Malacoctenus triangulatus          Starksia ocellata




  Labridae

             Thalassoma bifasciatum           Halichoeres garnoti
                                              most frecuently we found…




Pomacentridae

                   Abudefduf sexatilis       Stegastes partitus
                      comelonas
Grammatidae                       Monacanthidae




 Gramma loreto                     Monacanthus tuckeri                Pterois volitans




      Haemulidae                                         Serranidae




  Haemulon flavolineatum
                                               Lioproma rubre               Cephalopholis cruentata
       Chak-chi
                                                                                    cabrilla


 Scaridae
  Loros
                    Sparisoma viridae          Scarus iserti             Sparisoma aurofrenatum


                                                                           species economically important
Crustacean

45 sequences

Using the barcodes we
could identify 20 different
species.


3 Orders:
Euphausiacea…..1 species

Stomatopoda……2 species

Decapoda………17 species
Euphausiacea
 Euphausia americana




                  Euphausia sp




Stomatopoda




                       Pseudosquilla sp.



                                 This only was able to assign to family level…
                                         Gonodactylidae…
Decapoda: 17 species


    Hyppolytidae




         Thor sp.




                                             Alpheidae   (CRU120)

                       Palaemonidae




                                      Something like this….
In Bold
Decapoda: 141 Families
and 2,049 sp sequenced

The BOLD data base is not
complete yet….
Conclusions

1. This is an example of how important the barcodes are in the support
   of sustainable fisheries.

2. With the help of barcodes we will know when and where the fish
   spawn, by directing protection measures in these particular seasons
   and sites we well suport fisheries.

3. This is the first time we have a tool that will help us to identify all
   species targeted by lion fish.

4. This is the first time that we have been able to report the kind of
   prey the lionfish consumes in the Mexican Caribbean.

5. The only limit has been that the barcode library is still incomplete,
   mainly crustaceans, but with time it will be possible to identify all
   species consumed, not only by exotics, but also by any other species.
Acknowledgements:
NOAA y RSMAS
CONANP – Xcalak y Banco Chinchorro
CONABIO y BARCODE of LIFE
ECOSUR
ITCH

                                        Jacc
                             Diana                Manuel
                                           Caro            Lulú




                                     Selene                Paty
Thanks for your
  attention!



We need to visit
these places….




                    Xcalak

Martha Valdez-Moreno - Vertebrates Plenary

  • 1.
    The identification ofLarvae, eggs and stomach contents… three studies of the application of barcodes on Mexican fish. Martha Elena Valdez Moreno Lourdes Vásquez Yeomans Carolina Quintal Lizama Dalia Cázarez Carrillo Elva Leyva
  • 2.
    Contoy Punta Allen Contoy B. Chinchorro Xcalak Mahahual Banco Chinchorro The Mexican Caribbean Xcalak
  • 3.
    There exist manyplaces of reef fish spawning aggregations and nursery areas of economic and ecological importance. To ensure the sustainability of these areas as integrated ecosystems and the possibility to protect them, it is essential to know…
  • 4.
    What fish speciesare living in this region? Where are they? Adults Juvenile 74 mm LT 22 mm LT Larvae ? 19 mm LT Eggs 7 mm LT
  • 5.
    Applying barcodes we havefound some interesting things…
  • 6.
    Barcodes help usto identify the larvae… 69 new records for the Mexican Caribbean only at larvae stage Awaous banana Pterois volitans* River goby Lionfish Cozumel
  • 7.
    7 66 adult specieswith their larvae, previously unknown. Family Gerreidae Genus Eucinostomus E. jonesii E. melanopterus E. gula Using barcode The external morphology is not useful to identify these larvae…..
  • 8.
    Osteology description Eucinostomusjonesii clearing technique
  • 9.
    Barcode allows usto know the distribution and the time of the appearance of larvae species economically important 8-29/march/06 19/march/07 Mycteroperca bonaci Black grouper Aug/2005 Thunnus atlanticus Mar/2006 Blackfin tuna
  • 10.
    7 Family Gerreidae Genus Eucinostomus E. jonesii E. melanopterus E. gula Jan-Aug All year Mar-may Xcalak
  • 11.
    Egg distribution andthe time of the appearance …
  • 12.
    Regalecus glesne King of herrings Cozumel 9-Apr-2009 this fish could approach the coast in the north of the largest teleost fish of the world (8-10 m) the Mexican Caribbean for spawning or feeding
  • 13.
    Lachnolaimus maximus Hogfish Xcalak adults 1-30 Jan-2007
  • 14.
    The case of… Mycteropercabonaci Life cycle of the species when and where the fishes spawn development and maintenance fisheries propose protected areas
  • 15.
    Lionfish situation in Mexico…
  • 16.
    There are severalreasons to be concerned about their presence: They have venomous spines that could Is the first non- injure divers. native marine fish established in the Western North Atlantic and Mexico has many places that are Caribbean Sea. world class scuba diving destination Lionfish are predators that consume “mexican” native reef species!!! What kind of prey do they eat in the mexican caribbean ?
  • 17.
    Stomach contents What can I do? Use Barcode…
  • 18.
    Stomach contents analysis Cozumel, Xcalak,Contoy island 122 Pterois volitans Banco Chinchorro,Puerto Morelos fixed in alcohol (2009) Playa del Carmen 35 fresh digestive tracts were Mahahual placed in ethylic alcohol 96% Xcalak (2010) 90% showed a high degree of digestion of the tissue A total of 157 stomachs were examined only 144 had stomach contents We separated 330 prey items
  • 19.
    Results 170 sequences were compared with a reference library of DNA barcodes. 125 sequences matched with fishes 45 sequences matched with crustacean
  • 20.
    Fish: 30 different species were identified (12 families)  5 new records for Mexican Caribbean 1 surprise…. Gobidae* Apogonidae* Coryphopterus eidolon C. hyalinus Apogon townsendi Apogon maculatus   C. venezuelae C. thrix Apogon lachneri  Astrapogon puncticulatus C. tortugae  Apogon mosavi Priolepis hipoliti Lythypnus sp *greatest number of species
  • 21.
    Tripterygiidae Enneanectes altivelis Enneanectes boehlkei Labrisomidae  mmm…delicius! Malacoctenus triangulatus Starksia ocellata Labridae Thalassoma bifasciatum Halichoeres garnoti most frecuently we found… Pomacentridae Abudefduf sexatilis Stegastes partitus comelonas
  • 22.
    Grammatidae Monacanthidae Gramma loreto Monacanthus tuckeri Pterois volitans Haemulidae Serranidae Haemulon flavolineatum Lioproma rubre Cephalopholis cruentata Chak-chi cabrilla Scaridae Loros Sparisoma viridae Scarus iserti Sparisoma aurofrenatum species economically important
  • 23.
    Crustacean 45 sequences Using thebarcodes we could identify 20 different species. 3 Orders: Euphausiacea…..1 species Stomatopoda……2 species Decapoda………17 species
  • 24.
    Euphausiacea Euphausia americana Euphausia sp Stomatopoda Pseudosquilla sp. This only was able to assign to family level… Gonodactylidae…
  • 25.
    Decapoda: 17 species Hyppolytidae Thor sp. Alpheidae (CRU120) Palaemonidae Something like this….
  • 26.
    In Bold Decapoda: 141Families and 2,049 sp sequenced The BOLD data base is not complete yet….
  • 27.
    Conclusions 1. This isan example of how important the barcodes are in the support of sustainable fisheries. 2. With the help of barcodes we will know when and where the fish spawn, by directing protection measures in these particular seasons and sites we well suport fisheries. 3. This is the first time we have a tool that will help us to identify all species targeted by lion fish. 4. This is the first time that we have been able to report the kind of prey the lionfish consumes in the Mexican Caribbean. 5. The only limit has been that the barcode library is still incomplete, mainly crustaceans, but with time it will be possible to identify all species consumed, not only by exotics, but also by any other species.
  • 28.
    Acknowledgements: NOAA y RSMAS CONANP– Xcalak y Banco Chinchorro CONABIO y BARCODE of LIFE ECOSUR ITCH Jacc Diana Manuel Caro Lulú Selene Paty
  • 29.
    Thanks for your attention! We need to visit these places…. Xcalak