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Koalas: Unifying Spark and
pandas APIs
1
Xiao Li @ gatorsmile
PyBay Conf @ SF | Aug 2019
About Me
• Engineering Manager at Databricks
• Apache Spark Committer and PMC Member
• Previously, IBM Master Inventor
• Spark, Database Replication, Information Integration
• Ph.D. in University of Florida
• Github: gatorsmile
DATABRICKS WORKSPACE
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Notebooks
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DATA ENGINEERS DATA SCIENTISTS
DATABRICKS CLOUD SERVICE
DATABRICKS RUNTIME
Databricks Delta ML Frameworks
Reliable & Scalable Simple & Integrated
+ +
End to end ML lifecycle
Databricks Unified Analytics Platform
Apache Spark
Originally created by Databricks’ founders at UC Berkeley in 2009
A de facto unified analytics engine for large-scale data processing
- Just-in-time Data Warehouse [with Delta], Streaming, ETL,
ML, Graph Processing
PySpark API for Python; also API support for Scala, R and SQL
4
5
Image: Stack Overflow
pandas
Authored by Wes McKinney in 2008
The standard tool for data manipulation and analysis in Python
Deeply integrated into Python data science ecosystem, e.g.
numpy, matplotlib
Can deal with a lot of different situations, including:
- basic statistical analysis
- handling missing data
- time series, categorical variables, strings
6
Why Spark Performs Faster in Big Data?
Distributed computing in Spark
More lazy execution in Spark
- Triggered until users call the action APIs (collect, save, show)
- Mixed, combined, optimized and executed holistically
More efficient execution in Spark
- Tungsten execution engine: whole-stage code generation
- Catalyst optimizer: heuristics-based and cost-based query
optimization, adaptive query optimization [Spark 3.0]
7
Spark-ify pandas Code???
• The increasing scale and complexity of data
operations
• pandas-based Python scripts become too slow
• But,,, “Spark switch” is time consuming and not
straightforward
8
9
Koalas
• Announced April 24, 2019
• Pure Python library
• Familiar if coming from pandas
• Aims at providing the pandas
API on top of Spark
• Unifies the two ecosystems
with a familiar API
• Seamless transition between
small and large data
10
API Differences
pandas
- Born of need + batteries included: providing APIs for common tasks
- Type system from NumPy
- Be Pythonic
PySpark
- Abstraction: tasks are implemented by primitives composition
- Type system from ANSI SQL
- Consistent with Scala DataFrame APIs
11
12
pandas DataFrame Spark DataFrame
Column df[‘col’] df[‘col’]
Mutability Mutable Immutable
Add a column df[‘c’] = df[‘a’] + df[‘b’] df.withColumn(‘c’, df[‘a’] + df[‘b’])
Rename columns df.columns = [‘a’,’b’] df.select(df[‘c1’].alias(‘a’),
df[‘c2’].alias(‘b’))
Value count df[‘col’].value_counts() df.groupBy(df[‘col’]).count()
.orderBy(‘count’, ascending =
False)
Pandas DataFrame vs Spark DataFrame
A short example
13
import pandas as pd
df = pd.read_csv("my_data.csv")
df.columns = [‘x’, ‘y’, ‘z1’]
df[‘x2’] = df.x * df.x
df = (spark.read
.option("inferSchema", "true")
.option("comment", True)
.csv("my_data.csv"))
df = df.toDF(‘x’, ‘y’, ‘z1’)
df = df.withColumn(‘x2’, df.x*df.x)
pandas PySpark
A short example
14
import pandas as pd
df = pd.read_csv("my_data.csv")
df.columns = [‘x’, ‘y’, ‘z1’]
df[‘x2’] = df.x * df.x
pandas Koalas
import databricks.koalas as ks
df = ks.read_csv("my_data.csv")
df.columns = [‘x’, ‘y’, ‘z1’]
df[‘x2’] = df.x * df.x
Koalas
• Provide discoverable APIs for common data science
tasks (i.e., follows pandas)
• Unify pandas API and Spark API, but pandas first
• pandas APIs that are appropriate for distributed
dataset
• Easy conversion from/to pandas DataFrame or
numpy array.
15
Koalas
16
Catalyst Optimization &
Tungsten Execution
DataFrame APIsSQL
Koalas
Core
Data Source
Connectors
Pandas
SPARK
A lean API layer
Demo
17
Current status
• Bi-weekly releases, very active community with daily changes
• The most common functions have been implemented:
- 60% of the DataFrame/Series API
- 50% of the DataFrameGroupBy/SeriesGroupBy API
- 15% of the Index/MultiIndex API
- to_datetime, get_dummies, …
- to_delta, to_parquet, to_spark_io, sql, cache, …
18
Quickly gaining traction
19
- 300+ patches merged
since announcement
- 20 significant
contributors outside of
Databricks
- 6K+ daily downloads
What to expect soon?
• Performance enhancements
• Better indexing support
• Better error handling
• Better coverage of pandas APIs
• More time series related functions
• Better visualization support
20
Getting started
• pip install koalas
• conda install koalas
• Look for docs and updates on github.com/databricks/koalas
• Project docs are published here: https://koalas.readthedocs.io
21
Do you have suggestions or requests?
Submit requests to github.com/databricks/koalas/issues
Very easy to contribute
github.com/databricks/koalas/blob/master/CONTRIBUTING.md
22
Thank you
Xiao Li
(lixiao@databricks.com)

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Koalas: Unifying Spark and pandas APIs

  • 1. Koalas: Unifying Spark and pandas APIs 1 Xiao Li @ gatorsmile PyBay Conf @ SF | Aug 2019
  • 2. About Me • Engineering Manager at Databricks • Apache Spark Committer and PMC Member • Previously, IBM Master Inventor • Spark, Database Replication, Information Integration • Ph.D. in University of Florida • Github: gatorsmile
  • 3. DATABRICKS WORKSPACE APIs Jobs Models Notebooks Dashboards DATA ENGINEERS DATA SCIENTISTS DATABRICKS CLOUD SERVICE DATABRICKS RUNTIME Databricks Delta ML Frameworks Reliable & Scalable Simple & Integrated + + End to end ML lifecycle Databricks Unified Analytics Platform
  • 4. Apache Spark Originally created by Databricks’ founders at UC Berkeley in 2009 A de facto unified analytics engine for large-scale data processing - Just-in-time Data Warehouse [with Delta], Streaming, ETL, ML, Graph Processing PySpark API for Python; also API support for Scala, R and SQL 4
  • 6. pandas Authored by Wes McKinney in 2008 The standard tool for data manipulation and analysis in Python Deeply integrated into Python data science ecosystem, e.g. numpy, matplotlib Can deal with a lot of different situations, including: - basic statistical analysis - handling missing data - time series, categorical variables, strings 6
  • 7. Why Spark Performs Faster in Big Data? Distributed computing in Spark More lazy execution in Spark - Triggered until users call the action APIs (collect, save, show) - Mixed, combined, optimized and executed holistically More efficient execution in Spark - Tungsten execution engine: whole-stage code generation - Catalyst optimizer: heuristics-based and cost-based query optimization, adaptive query optimization [Spark 3.0] 7
  • 8. Spark-ify pandas Code??? • The increasing scale and complexity of data operations • pandas-based Python scripts become too slow • But,,, “Spark switch” is time consuming and not straightforward 8
  • 9. 9
  • 10. Koalas • Announced April 24, 2019 • Pure Python library • Familiar if coming from pandas • Aims at providing the pandas API on top of Spark • Unifies the two ecosystems with a familiar API • Seamless transition between small and large data 10
  • 11. API Differences pandas - Born of need + batteries included: providing APIs for common tasks - Type system from NumPy - Be Pythonic PySpark - Abstraction: tasks are implemented by primitives composition - Type system from ANSI SQL - Consistent with Scala DataFrame APIs 11
  • 12. 12 pandas DataFrame Spark DataFrame Column df[‘col’] df[‘col’] Mutability Mutable Immutable Add a column df[‘c’] = df[‘a’] + df[‘b’] df.withColumn(‘c’, df[‘a’] + df[‘b’]) Rename columns df.columns = [‘a’,’b’] df.select(df[‘c1’].alias(‘a’), df[‘c2’].alias(‘b’)) Value count df[‘col’].value_counts() df.groupBy(df[‘col’]).count() .orderBy(‘count’, ascending = False) Pandas DataFrame vs Spark DataFrame
  • 13. A short example 13 import pandas as pd df = pd.read_csv("my_data.csv") df.columns = [‘x’, ‘y’, ‘z1’] df[‘x2’] = df.x * df.x df = (spark.read .option("inferSchema", "true") .option("comment", True) .csv("my_data.csv")) df = df.toDF(‘x’, ‘y’, ‘z1’) df = df.withColumn(‘x2’, df.x*df.x) pandas PySpark
  • 14. A short example 14 import pandas as pd df = pd.read_csv("my_data.csv") df.columns = [‘x’, ‘y’, ‘z1’] df[‘x2’] = df.x * df.x pandas Koalas import databricks.koalas as ks df = ks.read_csv("my_data.csv") df.columns = [‘x’, ‘y’, ‘z1’] df[‘x2’] = df.x * df.x
  • 15. Koalas • Provide discoverable APIs for common data science tasks (i.e., follows pandas) • Unify pandas API and Spark API, but pandas first • pandas APIs that are appropriate for distributed dataset • Easy conversion from/to pandas DataFrame or numpy array. 15
  • 16. Koalas 16 Catalyst Optimization & Tungsten Execution DataFrame APIsSQL Koalas Core Data Source Connectors Pandas SPARK A lean API layer
  • 18. Current status • Bi-weekly releases, very active community with daily changes • The most common functions have been implemented: - 60% of the DataFrame/Series API - 50% of the DataFrameGroupBy/SeriesGroupBy API - 15% of the Index/MultiIndex API - to_datetime, get_dummies, … - to_delta, to_parquet, to_spark_io, sql, cache, … 18
  • 19. Quickly gaining traction 19 - 300+ patches merged since announcement - 20 significant contributors outside of Databricks - 6K+ daily downloads
  • 20. What to expect soon? • Performance enhancements • Better indexing support • Better error handling • Better coverage of pandas APIs • More time series related functions • Better visualization support 20
  • 21. Getting started • pip install koalas • conda install koalas • Look for docs and updates on github.com/databricks/koalas • Project docs are published here: https://koalas.readthedocs.io 21
  • 22. Do you have suggestions or requests? Submit requests to github.com/databricks/koalas/issues Very easy to contribute github.com/databricks/koalas/blob/master/CONTRIBUTING.md 22