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Karyotype and chromosomal
aberrations
Karyotype
• The complete set of chromosomes possessed
by an organism .
• It is presented by the picture of metaphase
chromosomes lined up in descending order of
their sizes.
• Prepared by actively dividing cells.
Karyotype of human male
Karyotypes give info about
• No of chromosomes
• Major deletion, inversion, translocation and
duplication
• Addition or deletion of whole chromosome
Types of chromosomal mutations
• Three main types
1. Chromosomal rearrangemants
2. Aneuploids
3. Polyploids
Chromosomal rearrangements
• Arises due to alteration of structure of
chromosome
• In a way that a piece of chromosome may get
a) Duplicated
b) Deleted
c) Inverted
d) Translocated
Reasons for such arrangements
• Due to double stranded breaks in dna
and when these broken ends try to join together
after breaks their two possibilities
I. Either they join correctly and restore the info
II. Or they join wrongly and cause rearraned
chromosomes
• Crossing over may also be the reason
Duplication
• Part of chromosome is doubled
Formation of loop for synapsis
Types
Tandem displaced reversed
In which
duplicated
segment
immediately
adjacent to original
Duplicated
segment is far
away
In which the
duplicated
segment is
adjacent and
inverted
Deletion
A part of chromosome is lost
• A large deletion is easily detected
• In heterozygous for deletion loop must form in
normal chromosome form in order to align
Consequences of deletion
• If centromere is included in deletion the
segregation will not occur in mitosis and
meiosis and will usually be lost.
• In homozygous state it could be lethal as all
the copies of genes get lost
• In psuedodominance the recessive allele is
expressed when the wild type allele is deleted
Example
• Cri du chat syndrome;
In humans, a deletion on the short arm of 5
chromosome is responsible for cri-du-chat
Wolf hirschorns
Deletion on short arm of 4 chromosome
Inversion
• In which segment of chromosome is inverted
to 180 degree
Types
• Pericentric
• paracentric
Interesting fact
• Human chromosomes 4 differ from
chimpanzes by pericentric inversion.
Position effect
• expressions are altered as positions alter
• For example ,in drosophilla
Translocation
• Entails movement of genetic material
between non homologous chromosomes
• Not to be confused with crossing over
Types
• Reciprocal non reciprocal
• They may also cause position effect
• Neurofibromatosis is caused by translocation
in chromosome 17 . It is due to tumors of skin
and nervous system
Robertsonian translocation
Aneuploidy
• An increase or decrease in the no of individual
chromosome.
causes
It may be due to
1. Loss of chromosome due to deletion of
centromere
2. Robertsonian translocation
3. Due to non disjunction
Types
Nullisomy
The loss of both members of homologous
chromosome such as 2n – 2 =44
Monosomy
• Loss of single chromosome
• 2n – 1=45 chromosomes
• Example is that of turner syndrome
Trisomy
• gain of single chromosome
• Results from non disjunction of chromosomes
and leading to availability of three sets of
homologous chromosomes
• 2n + 1= 47
• Example is down syndrome, ptau and edward
Tetrasomy
• gain of two homologous chromosomes
• As 2n +2 = 48
Sex chromosomal aneuploidy is
better tolerated than
autosomal e. g turner n
klinefelter etc
Autosomal aneuploidy is less
tolerated as there is no dosage
compensation mechanism for
them.
Mosaicism
• Non disjunction during mitotic phase leads to
generation of patches in which every cell has a
chromosome abnormality and other normal
patches.
• e. g in turner syndrome
Polyploidy
• Represents the loss or gain of more than two
set of chromosomes such as 3n ,4n ,5n
• No animal has polyploidy except for a rat
argentina . Mostly found in invertebrates.
Autopolyploidy
• In which all chromosomal sets are from single
specie
Alloploidy
• Arises by hybridization of two species .
• Advantages of polyploidy are
• Plants with broad leaves flowers and fruit are
produced
• Wheat showing hexaploid genome has larger
seed as compaired to ancestors.
Methods to detect mutations
• Genetic amniocentesis can provide
information about developing fetus genetic
makeup.
• is usually done between weeks 15 and 20 of
pregnancy.
• Chorionic villus sampling (CVS) is used to
detect birth defects, genetic diseases before
birth done between 10 and 12 week.
Reference
• Benjamin A. Pierce - Genetics _ a conceptual
approach.
Kaaryotype and abberation

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Kaaryotype and abberation

  • 2. Karyotype • The complete set of chromosomes possessed by an organism . • It is presented by the picture of metaphase chromosomes lined up in descending order of their sizes. • Prepared by actively dividing cells.
  • 4. Karyotypes give info about • No of chromosomes • Major deletion, inversion, translocation and duplication • Addition or deletion of whole chromosome
  • 5. Types of chromosomal mutations • Three main types 1. Chromosomal rearrangemants 2. Aneuploids 3. Polyploids
  • 6. Chromosomal rearrangements • Arises due to alteration of structure of chromosome • In a way that a piece of chromosome may get a) Duplicated b) Deleted c) Inverted d) Translocated
  • 7. Reasons for such arrangements • Due to double stranded breaks in dna and when these broken ends try to join together after breaks their two possibilities I. Either they join correctly and restore the info II. Or they join wrongly and cause rearraned chromosomes • Crossing over may also be the reason
  • 8. Duplication • Part of chromosome is doubled
  • 9. Formation of loop for synapsis
  • 10. Types Tandem displaced reversed In which duplicated segment immediately adjacent to original Duplicated segment is far away In which the duplicated segment is adjacent and inverted
  • 11.
  • 12. Deletion A part of chromosome is lost
  • 13. • A large deletion is easily detected • In heterozygous for deletion loop must form in normal chromosome form in order to align
  • 14. Consequences of deletion • If centromere is included in deletion the segregation will not occur in mitosis and meiosis and will usually be lost. • In homozygous state it could be lethal as all the copies of genes get lost • In psuedodominance the recessive allele is expressed when the wild type allele is deleted
  • 15. Example • Cri du chat syndrome; In humans, a deletion on the short arm of 5 chromosome is responsible for cri-du-chat Wolf hirschorns Deletion on short arm of 4 chromosome
  • 16. Inversion • In which segment of chromosome is inverted to 180 degree
  • 18. Interesting fact • Human chromosomes 4 differ from chimpanzes by pericentric inversion.
  • 19. Position effect • expressions are altered as positions alter • For example ,in drosophilla
  • 20. Translocation • Entails movement of genetic material between non homologous chromosomes • Not to be confused with crossing over
  • 22. • They may also cause position effect • Neurofibromatosis is caused by translocation in chromosome 17 . It is due to tumors of skin and nervous system
  • 24. Aneuploidy • An increase or decrease in the no of individual chromosome. causes It may be due to 1. Loss of chromosome due to deletion of centromere 2. Robertsonian translocation 3. Due to non disjunction
  • 25. Types Nullisomy The loss of both members of homologous chromosome such as 2n – 2 =44
  • 26. Monosomy • Loss of single chromosome • 2n – 1=45 chromosomes • Example is that of turner syndrome
  • 27. Trisomy • gain of single chromosome • Results from non disjunction of chromosomes and leading to availability of three sets of homologous chromosomes • 2n + 1= 47 • Example is down syndrome, ptau and edward
  • 28. Tetrasomy • gain of two homologous chromosomes • As 2n +2 = 48 Sex chromosomal aneuploidy is better tolerated than autosomal e. g turner n klinefelter etc Autosomal aneuploidy is less tolerated as there is no dosage compensation mechanism for them.
  • 29.
  • 30. Mosaicism • Non disjunction during mitotic phase leads to generation of patches in which every cell has a chromosome abnormality and other normal patches. • e. g in turner syndrome
  • 31. Polyploidy • Represents the loss or gain of more than two set of chromosomes such as 3n ,4n ,5n • No animal has polyploidy except for a rat argentina . Mostly found in invertebrates.
  • 32. Autopolyploidy • In which all chromosomal sets are from single specie
  • 33. Alloploidy • Arises by hybridization of two species . • Advantages of polyploidy are • Plants with broad leaves flowers and fruit are produced • Wheat showing hexaploid genome has larger seed as compaired to ancestors.
  • 34. Methods to detect mutations • Genetic amniocentesis can provide information about developing fetus genetic makeup. • is usually done between weeks 15 and 20 of pregnancy. • Chorionic villus sampling (CVS) is used to detect birth defects, genetic diseases before birth done between 10 and 12 week.
  • 35.
  • 36. Reference • Benjamin A. Pierce - Genetics _ a conceptual approach.