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Interleukin 1β (+3954, -511 and -31) polymorphism in
chronic periodontitis patients from North India
Amirisetty R, Patel RP, Das S et al
Acta Odontol Scand.2015 Jul;73(5):343-7
Bibina George
INTRODUCTION
 Periodontitis
 Genetic polymorphism causes changes in proteins and their expression might be
responsible for the disease development but sometimes these changes are also
protective in nature.
 Studies have suggested cytokines to play a pivotal role in the disease development
and act as a potential diagnostic marker of the disease
INTERLEUKIN 1 (Chromosome: 2q13-21)
IL 1A IL 1B IL 1RN
Codes for
IL 1α, IL 1β, IL 1ra
Interleukin 1 (IL-1), a proinflammatory cytokine, has been implicated in both
acute and chronic inflammatory disease.
Functions:
Osteoclastic activity in periodontitis
Influences:
Immune cell recruitment
Cell proliferation
Tissue destruction
Vascular smooth muscle cell contraction
AIM
 To elucidate the role of interleukin 1β (+3954 C/T; -511C/T and -31T/C)
polymorphisms and specific haplotypes with chronic periodontitis recruited in a
North Indian population hailing from Chhattisgarh.
MATERIALS AND METHODS
 29 periodontitis patients (males: females =23:6) presenting with new cases of
chronic periodontitis, evaluated in the Department of Periodontology,
Chhattisgarh Dental College and Research Institute, Rajnandgaon, were
included in the study
SELECTION CRITERIA
INCLUSION & EXCLUSION CRITERIA
DNA isolation and genotyping
5 ml of blood collected in EDTA tubes
Std. phenol chloroform method
Genomic DNA extracted
PCR-RFLP
Amplification on 1.5% agarose gel
Digested with Taq1,Ava 1,Alu1
Separation of fragments on 2.5% agarose gel
Statistical analysis
 Association between genotypes and chronic periodontitis was examined by Odds
ratio with 95% confidence interval (CI)
 Chi square analysis using Open EPI6 software
 Statistical significance was defined as p < 0.05.
HAPLOTYPE ANALYSIS
 Online software SNP stat.
RESULTS
DISCUSSION
 Studies suggest that variation within IL-1 gene cluster influences the variation in
synthesis of cytokines and certain haplotype groups resulting from different variants
in IL-1a and IL-1b gene increase the disease susceptibility
 The analysis of +3954 variant revealed the T-allele to be more frequent among the
patients when compared with healthy controls and the CT genotype to be a
significant risk factor for the development of the disease which is in accordance
with studies from Brazil and South Indian states
Review Of Literature In Favour
 Shete et al reports the frequency of the CC genotype and C-allele to be associated
with chronic periodontitis (+3954)
 Deng JS et al documented CT genotype of chronic periodontitis patients to be a
significant risk factor in Caucasians but not in Asians (+3954)
 Nikolopoulos GK et al included 53 studies having 4178 cases and 4590 controls,
revealed a strong association for the variant with disease susceptibility (+3954)
 Trevillato PC et al reported TT genotype to be significantly higher among the
Brazilian patients and a significant association was found following the codominant
genotypic model (-511)
 Karasneh JA et al :A negative association has also been reported in populations
from Northern Europe, Poland, Jordan and South Africa (+3954)
 Nikolopoulo et al reports a weak positive association and Jansson et al reports a
negative association for -511 variant
 Shete AR et al suggested strong linkage disequilibrium of -31T/C variant with
511C/T among both patients and controls.
Literature against
CONCLUSION
 This study involving North-Indian population suggests the -511 and +3954 variants
are risk factors for chronic periodontitis and that these two polymorphic sites
encoded along IL-1β can be used as potential markers for chronic periodontitis, but
it needs evaluation in a larger cohort of samples.
Jc 1 . il ib in chronic periodontitits

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Jc 1 . il ib in chronic periodontitits

  • 1. Interleukin 1β (+3954, -511 and -31) polymorphism in chronic periodontitis patients from North India Amirisetty R, Patel RP, Das S et al Acta Odontol Scand.2015 Jul;73(5):343-7 Bibina George
  • 2. INTRODUCTION  Periodontitis  Genetic polymorphism causes changes in proteins and their expression might be responsible for the disease development but sometimes these changes are also protective in nature.  Studies have suggested cytokines to play a pivotal role in the disease development and act as a potential diagnostic marker of the disease
  • 3. INTERLEUKIN 1 (Chromosome: 2q13-21) IL 1A IL 1B IL 1RN Codes for IL 1α, IL 1β, IL 1ra
  • 4. Interleukin 1 (IL-1), a proinflammatory cytokine, has been implicated in both acute and chronic inflammatory disease. Functions: Osteoclastic activity in periodontitis Influences: Immune cell recruitment Cell proliferation Tissue destruction Vascular smooth muscle cell contraction
  • 5. AIM  To elucidate the role of interleukin 1β (+3954 C/T; -511C/T and -31T/C) polymorphisms and specific haplotypes with chronic periodontitis recruited in a North Indian population hailing from Chhattisgarh.
  • 6. MATERIALS AND METHODS  29 periodontitis patients (males: females =23:6) presenting with new cases of chronic periodontitis, evaluated in the Department of Periodontology, Chhattisgarh Dental College and Research Institute, Rajnandgaon, were included in the study
  • 7. SELECTION CRITERIA INCLUSION & EXCLUSION CRITERIA
  • 8. DNA isolation and genotyping 5 ml of blood collected in EDTA tubes Std. phenol chloroform method Genomic DNA extracted PCR-RFLP Amplification on 1.5% agarose gel Digested with Taq1,Ava 1,Alu1 Separation of fragments on 2.5% agarose gel
  • 9. Statistical analysis  Association between genotypes and chronic periodontitis was examined by Odds ratio with 95% confidence interval (CI)  Chi square analysis using Open EPI6 software  Statistical significance was defined as p < 0.05.
  • 10. HAPLOTYPE ANALYSIS  Online software SNP stat.
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  • 16. DISCUSSION  Studies suggest that variation within IL-1 gene cluster influences the variation in synthesis of cytokines and certain haplotype groups resulting from different variants in IL-1a and IL-1b gene increase the disease susceptibility  The analysis of +3954 variant revealed the T-allele to be more frequent among the patients when compared with healthy controls and the CT genotype to be a significant risk factor for the development of the disease which is in accordance with studies from Brazil and South Indian states
  • 17. Review Of Literature In Favour  Shete et al reports the frequency of the CC genotype and C-allele to be associated with chronic periodontitis (+3954)  Deng JS et al documented CT genotype of chronic periodontitis patients to be a significant risk factor in Caucasians but not in Asians (+3954)  Nikolopoulos GK et al included 53 studies having 4178 cases and 4590 controls, revealed a strong association for the variant with disease susceptibility (+3954)
  • 18.  Trevillato PC et al reported TT genotype to be significantly higher among the Brazilian patients and a significant association was found following the codominant genotypic model (-511)
  • 19.  Karasneh JA et al :A negative association has also been reported in populations from Northern Europe, Poland, Jordan and South Africa (+3954)  Nikolopoulo et al reports a weak positive association and Jansson et al reports a negative association for -511 variant  Shete AR et al suggested strong linkage disequilibrium of -31T/C variant with 511C/T among both patients and controls. Literature against
  • 20. CONCLUSION  This study involving North-Indian population suggests the -511 and +3954 variants are risk factors for chronic periodontitis and that these two polymorphic sites encoded along IL-1β can be used as potential markers for chronic periodontitis, but it needs evaluation in a larger cohort of samples.