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IOSR Journal of Biotechnology and Biochemistry (IOSR-JBB)
e-ISSN: XXXX-XXXX, p-ISSN: XXXX-XXXX, Volume 1, Issue 6 (Sep. – Oct. 2015), PP 33-36
www.iosrjournals.org
www.iosrjournals.org 33 | Page
Isolation and characterization of lipolytic Pseudomonas spp. from
oil contaminated water samples
Vivek S. Vishwe1
*, Shrikant P. Gajbhiye1
, Shashikant P. Vaidya2
,
and Abhay S. Chowdhary
1
(Department of Bacteriology, Haffkine Institute for Training, Research and Testing, Parel, Mumbai 400 012,
India)
2
(Department of Clinical Pathology, Haffkine Institute for Training, Research and Testing, Parel, Mumbai 400
012, India)
Abstract: Oil contaminated water samples collected from different areas in Pune were screened for the
selective isolation of lipolytic Pseudomonas spp. Screening medium containing Tributyrin (1% v/v) and
Rhodamine B was used for the specific isolation of lipolytic Pseudomonas spp. from oil contaminated water
samples. Lipolytic bacteria showing zone of clearance around the colonies were selected for the present study.
Isolated bacteria were identified upto genus level with the help of morphological and biochemical testing by
following Bergey’s manual. Spectrophotometric Lipase assay showed that out of 49 lipolytic Pseudomonas spp.,
WP23 exhibits the maximum Lipase activity of about 45.4733 U/ml.
Keywords: Biochemical tests, Lipase, Rhodamine B, Spectrophotometric assay, Tributyrin.
I. Introduction
Lipases (triacylglycerol acylhydrolases, EC 3.1.1.3) are enzymes having a biological function of
catalyzing the hydrolysis of triacylglycerols [1]. Lipase catalyzes the hydrolysis of triacylglycerols into a
diacylglycerols, monoacylglycerols, glycerols and fatty acids at water-lipid interface [2,3]. In non-aqueous
environment, Lipases can also catalyze ester synthesis [3,4]. Lipases are one of the most important enzymes that
are used in various industries like Detergent, Food, Leather, Textiles, Pharmaceuticals, etc [4,5]. Bacterial
Lipases are the enzymes with tremendous demand due to their potential industrial applications & stability.
Although Lipase enzyme was isolated and purified from fungi, bacteria, yeast, animal and plant sources, but of
all these bacterial Lipases are considerably commercially important and physiologically significant [6].
Among various Gram positive and Gram negative bacteria, the Pseudomonas spp. remain considerably
less explored for the purpose of Lipase production. Hence the present study mainly focuses on the selective
isolation of lipolytic Pseudomonas spp. from various oil contaminated water samples.
II. Materials And Methods
2.1 Collection of oil contaminated water samples
Water samples mainly collected from oil contaminated sites like sewage treatment plants, riverside, bus
stand-railway car shed, car-bike servicing and washing centers, etc. situated in and around Pune region were
used in the present study for the isolation of lipolytic bacteria. Sterile containers were used for the collection of
oil contaminated water samples. Then these samples were transferred to the laboratory for further analysis [7,8].
In the present study, total 14 oil contaminated water samples were collected and screened for the presence of
lipolytic Pseudomonas spp.
2.2 Lipolytic bacteria isolation
Selective isolation of lipolytic bacteria from oil contaminated water samples were performed by using
Tributyrin agar medium containing Rhodamine B. Pour plate method was used for the screening of water
samples for isolation of lipolytic bacteria. Tributyrin Agar base medium containing Rhodamine B consists of
components like tributyrin 1%(v/v), yeast extract 0.3%(w/v), peptic digest of animal tissue 0.5%(w/v),
Rhodamine B 0.0001%(w/v) & agar 1.5%(w/v). Petriplates were then incubated for about 24 - 48 hours in an
incubator at an incubation temperature of 370
C. After incubation, lipolytic bacterial colonies showing a clear
zone of inhibition of tributyrin around the edges of the colonies were selected for the further studies
[9,10,11,12].
Isolation and characterization of lipolytic Pseudomonas spp. from oil contaminated water samples
www.iosrjournals.org 34 | Page
2.3 Screening of lipolytic isolates
After completion of 24 - 48 hours of incubation, lipolytic bacteria which are Gram negative, rod shaped
and motile in nature were selected for the present studies. Microbiological screening of isolated lipolytic
bacteria was performed by four quadrant streaking method on Tributyrin agar plates containing Rhodamine B.
These plates were then incubated at 370
C for 24 - 48 hours. After incubation, these plates were checked for the
appearance of zone of inhibition around the bacterial colonies [13,14]. Isolated pure cultures of lipolytic bacteria
were maintained in the form of glycerol stock preparations at -200
C for purpose of preservation.
2.4 Biochemical characterization of the isolates
Identification of isolated lipolytic bacteria upto genus level was performed with the help of
morphological and different biochemical characteristics. Gram’s nature, bacterial colony characters, and
motility of the organism were studied for morphological analysis while different tests like Indole test, Nitrate
reduction test, Catalase test, Oxidase test along with carbohydrate / sugar fermentation were performed for
analysis of biochemical characters of isolated lipolytic bacteria. With the help of morphological and biochemical
characteristics along with Bergey’s manual of Systematic Bacteriology, genus level identification of isolated
lipolytic bacteria was performed [15,16].
2.5 Lipase assay
Extracellular Lipase activity was measured using polyoxyethylene sorbitan ester (Tween 80) as
substrate by the method described by Tirunarayanan and Lundbeck with slight modifications. Tween 80 is the
ester of oleic acid. Briefly, the reaction mixture contains 0.1ml of 10% Tween 80 in 50mM Tris hydrochloride
buffer (pH 7.6), 0.5ml of concentrated culture supernatant as a source of enzyme, 0.1ml of 1M CaCl2 in Tris
buffer, and 2.3ml of Tris buffer (pH 7.6). Reaction mixture with 0.5ml of deionized water instead of supernatant
was considered as a blank. Enzyme assay for each isolate was performed in triplicates. Then the reaction
mixtures were incubated for 2 hours at 370
C in an incubator. In this spectrophotometric assay, Tween was
cleaved to produce fatty acid and alcohol. Presence of calcium in the reaction mixture leads to the formation of
an insoluble fatty acid salt, giving a precipitate which can be measured spectrophotometrically at 400nm. One
unit of Lipase activity was defined as the amount of enzyme resulted in an increase of optical density at 400nm
(OD400) of 0.01 after 2 hours under the assay conditions [17]. Lipase activity of all isolated lipolytic
Pseudomonas spp. was determined and expressed in U/ml.
III. Results
3.1 Screening, Isolation and Identification of the isolates
Total 49 (WP01-WP49) lipolytic Pseudomonas spp. were isolated from 14 oil contaminated water
samples collected from different areas of Pune. All 49 lipolytic isolates were then identified upto genus level
with the help of morphological and biochemical studies. All the lipolytic isolates were characterized as Gram
negative, rod shaped, motile bacteria that are capable of hydrolysis of tributyrin (Fig. 1). A zone of clearance
around the bacterial colonies was observed due to the hydrolysis of tributyrin after 48 hours of incubation.
Figure 1. Zone of clearance around the colonies due to hydrolysis of tributyrin on Tributyrin agar
containing Rhodamine B.
3.2 Lipase Assay
Enzyme assay for each isolate was performed in triplicates. After performing the Lipase assay of these
49 lipolytic isolates, it was found that WP23 exhibits maximum enzymatic activity (Fig. 2). It was observed
that WP23 possesses Lipase activity of about 45.4733 U/ml.
Isolation and characterization of lipolytic Pseudomonas spp. from oil contaminated water samples
www.iosrjournals.org 35 | Page
Figure 2. Lipase activity of lipolytic Pseudomonas spp. isolated from water samples by
spectrophotometric assay.
3.3 Identification of the selected lipolytic strain
Morphological & biochemical characteristics of the lipolytic isolates were studied for the identification
of the isolated bacteria. Lipolytic bacterial strain WP23 exhibit maximum Lipase activity as compared to the
other strains as indicated in Figure 2. Morphological & biochemical studies of WP23 were carried out (Table
1). According to the Bergey’s manual of Systematic Bacteriology & 16SrDNA sequencing analysis, the isolate
WP23 was identified and confirmed as Pseudomonas aeruginosa.
Table 1: Morphological & Biochemical Characterization of WP23:
WP23 Colony
Characters
Details Biochemical Tests Results
Shape Circular Gram Staining Gram Negative Rods
Size 2-3mm Motility Motile
Color Creamy Indole Negative
Margin Smooth Catalase Positive
Opacity Opaque Nitrate Reduction Positive
Elevation Slightly elevated Oxidase Positive
Consistency Sticky
Sugar Fermentation
Glucose: Negative
Sucrose: Negative
Lactose: Negative
Maltose: Negative
Mannitol: Negative
Pigment Green
IV. Discussion
Extracellular Lipase enzyme obtained from microbial origin possesses variety of applications in various
industries. The present study helps us to understand the pre-existing industrial protocols for isolation and
characterization of Lipase producing organisms. Lipolytic Pseudomonas spp. isolated from oil contaminated
water samples possesses a high capability of extracellular Lipase production.
Out of 49 isolates (WP01-WP49), WP23 exhibits optimum Lipase activity. By using Bergey’s manual
of systemic Bacteriology and 16SrDNA sequencing analysis, WP23 was confirmed as Pseudomonas
aeruginosa. The present study also reveals the fact that every lipolytic organisms isolated from oil contaminated
water sample shows a wide diversity in the enzymatic activities.
V. Conclusion
In conclusion, a total of 49 lipolytic Pseudomonas spp. were isolated after screening 14 oil
contaminated water samples collected from different areas in Pune. After performing the spectrophotometric
Lipase assay, it was found that WP23 showed Lipase activity of about 45.4733 U/ml. As WP23 exhibits
optimum Lipase activity amongst them, WP23 was further identified and characterized upto species level with
the help of Bergey’s manual of systemic Bacteriology and 16SrDNA sequencing analysis. According to
morphological and biochemical testing, WP23 was identified as Pseudomonas aeruginosa. WP23 can be
effectively used for the extracellular Lipase enzyme production with the help of submerged fermentation.
Optimization of fermentation parameters shall also play a crucial role in the enhanced production of Lipase
enzyme.
Isolation and characterization of lipolytic Pseudomonas spp. from oil contaminated water samples
www.iosrjournals.org 36 | Page
Acknowledgement
The present study was funded by Haffkine Institute for Training, Research and Testing, Parel, Mumbai,
India. Authors would like to wish deep gratitude to Dr. Sweta Kothari (SSO, Virology Department) and
Sandeepan Mukherjee (SO, Virology Department) Haffkine Institute for their valuable guidance & providing
laboratory facilities for conducting the experimental work. Authors are also grateful to all the staff members &
collogue of Department of Bacteriology & Virology, Haffkine Institute for their constant support.
References
[1]. R. Sharma, Y. Chisti and U.C. Banerjee, Production, purification, characterization, and applications of Lipases: Review,
Biotechnology Advances, 19, 2001, 627-662.
[2]. D. Sharma, B. Sharma and A.K. Shukla, Biotechnological Approach of Microbial Lipase: Review, Biotechnology, 10(1), 2011, 23-
40.
[3]. N. Verma, S. Thakur and A.K. Bhatt, Microbial Lipases: Industrial Applications and Properties: Review, International Research
Journal of Biological Sciences, 1(8), 2012, 88-92.
[4]. R Aravindan, P. Anbumathi and T. Viruthagiri, Lipase applications in food industry: Review, Indian Journal of Biotechnology, 6,
2007, 141-158.
[5]. S. Thakur, Lipases: Its Sources, Properties and Applications: Review, International Journal of Scientific & Engineering Research,
3(7), 2012, 01-29.
[6]. F. Hasan, A.A. Shah, and A. Hameed, Industrial applications of microbial Lipases: Review, Enzyme and Microbial Technology, 39,
2006, 235-251.
[7]. K. Selvam, B. Vishnupriya and V.S.C. Bose, Screening and Quantification of Marine Actinomycetes Producing Industrial Enzymes
Amylase, Cellulase and Lipase from South Coast of India, International Journal of Pharmaceutical & Biological Archives, 2(5),
2011, 1481-1487.
[8]. S. Dharmsthiti and B. Kuhasuntisuk, Lipase from Pseudomonas aeruginosa LP602: biochemical properties and application for
wastewater treatment, Journal of Industrial Microbiology & Biotechnology, 21, 1998, 75-80.
[9]. E. Sirisha, N. Rajasekar and M. Lakshmi Narasu, Isolation and Optimization of Lipase Producing Bacteria from Oil Contaminated
Soils, Advances in Biological Research, 4(5), 2010, 249-252.
[10]. B. Gunalakshmi, M.K. Sahu, K. Sivakumar, T. Thangaradjou, S. Sudha, and L. Kannan, Investigation on Lipase producing
Actinomycetes strain LE-11 Isolated from Shrimp Pond, Research Journal of Microbiology, 3(2), 2008, 73-81.
[11]. Y. Huang, R. Locy, and J.D. Weete, Purification and Characterization of an Extracellular Lipase from Geotrichum marinum, Lipids,
39(3), 2004, 251-258.
[12]. M. I. Ghori, M. J. Iqbal, and A. Hameed, Characterization of a novel Lipase from Bacillus sp. isolated from tannery wastes,
Brazilian Journal of Microbiology, 42, 2011, 22-29.
[13]. A. T. Odeyemi, B.I. Ade riye, and O.S. Bamide le, Lipolytic Activity of some Strains of Klebsiella, Pseudomonas and
Staphylococcus Spp. from Restaurant Wastewater and Receiving Stream, Journal of Microbiology Research, 3(1), 2013, 43-52.
[14]. P. Anbu, M.J. Noh, D.H. Kim, J.S. Seo, B.K. Hur and K.H. Min, Screening and optimization of extracellular Lipases by
Acinetobacter species isolated from oil-contaminated soil in South Korea, African Journal of Biotechnology, 10(20), 2011, 4147-
4156.
[15]. T. Selva Mohan, A. Palavesam and G. Immanvel, Isolation and characterization of Lipase-producing Bacillus strains from oil mill
waste, African Journal of Biotechnology, 7(15),2008, 2728-2735.
[16]. A. Hiol, M.D. Jonzo, N. Rugani, D. Druet, L. Sarda, and L.C. Comeau, Purification and characterization of an extracellular Lipase
from a thermophilic Rhizopus oryzae strain isolated from palm fruit, Enzyme and Microbial Technology, 26, 2000, 421-430.
[17]. J. Pratt, J.D. Cooley, C.W. Purdy, and D.C. Straus, Lipase Activity from Strains of Pasteurella multocida, Current Microbiology,
40, 2000, 306-309.

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Isolation and characterization of lipolytic Pseudomonas spp. from oil contaminated water samples

  • 1. IOSR Journal of Biotechnology and Biochemistry (IOSR-JBB) e-ISSN: XXXX-XXXX, p-ISSN: XXXX-XXXX, Volume 1, Issue 6 (Sep. – Oct. 2015), PP 33-36 www.iosrjournals.org www.iosrjournals.org 33 | Page Isolation and characterization of lipolytic Pseudomonas spp. from oil contaminated water samples Vivek S. Vishwe1 *, Shrikant P. Gajbhiye1 , Shashikant P. Vaidya2 , and Abhay S. Chowdhary 1 (Department of Bacteriology, Haffkine Institute for Training, Research and Testing, Parel, Mumbai 400 012, India) 2 (Department of Clinical Pathology, Haffkine Institute for Training, Research and Testing, Parel, Mumbai 400 012, India) Abstract: Oil contaminated water samples collected from different areas in Pune were screened for the selective isolation of lipolytic Pseudomonas spp. Screening medium containing Tributyrin (1% v/v) and Rhodamine B was used for the specific isolation of lipolytic Pseudomonas spp. from oil contaminated water samples. Lipolytic bacteria showing zone of clearance around the colonies were selected for the present study. Isolated bacteria were identified upto genus level with the help of morphological and biochemical testing by following Bergey’s manual. Spectrophotometric Lipase assay showed that out of 49 lipolytic Pseudomonas spp., WP23 exhibits the maximum Lipase activity of about 45.4733 U/ml. Keywords: Biochemical tests, Lipase, Rhodamine B, Spectrophotometric assay, Tributyrin. I. Introduction Lipases (triacylglycerol acylhydrolases, EC 3.1.1.3) are enzymes having a biological function of catalyzing the hydrolysis of triacylglycerols [1]. Lipase catalyzes the hydrolysis of triacylglycerols into a diacylglycerols, monoacylglycerols, glycerols and fatty acids at water-lipid interface [2,3]. In non-aqueous environment, Lipases can also catalyze ester synthesis [3,4]. Lipases are one of the most important enzymes that are used in various industries like Detergent, Food, Leather, Textiles, Pharmaceuticals, etc [4,5]. Bacterial Lipases are the enzymes with tremendous demand due to their potential industrial applications & stability. Although Lipase enzyme was isolated and purified from fungi, bacteria, yeast, animal and plant sources, but of all these bacterial Lipases are considerably commercially important and physiologically significant [6]. Among various Gram positive and Gram negative bacteria, the Pseudomonas spp. remain considerably less explored for the purpose of Lipase production. Hence the present study mainly focuses on the selective isolation of lipolytic Pseudomonas spp. from various oil contaminated water samples. II. Materials And Methods 2.1 Collection of oil contaminated water samples Water samples mainly collected from oil contaminated sites like sewage treatment plants, riverside, bus stand-railway car shed, car-bike servicing and washing centers, etc. situated in and around Pune region were used in the present study for the isolation of lipolytic bacteria. Sterile containers were used for the collection of oil contaminated water samples. Then these samples were transferred to the laboratory for further analysis [7,8]. In the present study, total 14 oil contaminated water samples were collected and screened for the presence of lipolytic Pseudomonas spp. 2.2 Lipolytic bacteria isolation Selective isolation of lipolytic bacteria from oil contaminated water samples were performed by using Tributyrin agar medium containing Rhodamine B. Pour plate method was used for the screening of water samples for isolation of lipolytic bacteria. Tributyrin Agar base medium containing Rhodamine B consists of components like tributyrin 1%(v/v), yeast extract 0.3%(w/v), peptic digest of animal tissue 0.5%(w/v), Rhodamine B 0.0001%(w/v) & agar 1.5%(w/v). Petriplates were then incubated for about 24 - 48 hours in an incubator at an incubation temperature of 370 C. After incubation, lipolytic bacterial colonies showing a clear zone of inhibition of tributyrin around the edges of the colonies were selected for the further studies [9,10,11,12].
  • 2. Isolation and characterization of lipolytic Pseudomonas spp. from oil contaminated water samples www.iosrjournals.org 34 | Page 2.3 Screening of lipolytic isolates After completion of 24 - 48 hours of incubation, lipolytic bacteria which are Gram negative, rod shaped and motile in nature were selected for the present studies. Microbiological screening of isolated lipolytic bacteria was performed by four quadrant streaking method on Tributyrin agar plates containing Rhodamine B. These plates were then incubated at 370 C for 24 - 48 hours. After incubation, these plates were checked for the appearance of zone of inhibition around the bacterial colonies [13,14]. Isolated pure cultures of lipolytic bacteria were maintained in the form of glycerol stock preparations at -200 C for purpose of preservation. 2.4 Biochemical characterization of the isolates Identification of isolated lipolytic bacteria upto genus level was performed with the help of morphological and different biochemical characteristics. Gram’s nature, bacterial colony characters, and motility of the organism were studied for morphological analysis while different tests like Indole test, Nitrate reduction test, Catalase test, Oxidase test along with carbohydrate / sugar fermentation were performed for analysis of biochemical characters of isolated lipolytic bacteria. With the help of morphological and biochemical characteristics along with Bergey’s manual of Systematic Bacteriology, genus level identification of isolated lipolytic bacteria was performed [15,16]. 2.5 Lipase assay Extracellular Lipase activity was measured using polyoxyethylene sorbitan ester (Tween 80) as substrate by the method described by Tirunarayanan and Lundbeck with slight modifications. Tween 80 is the ester of oleic acid. Briefly, the reaction mixture contains 0.1ml of 10% Tween 80 in 50mM Tris hydrochloride buffer (pH 7.6), 0.5ml of concentrated culture supernatant as a source of enzyme, 0.1ml of 1M CaCl2 in Tris buffer, and 2.3ml of Tris buffer (pH 7.6). Reaction mixture with 0.5ml of deionized water instead of supernatant was considered as a blank. Enzyme assay for each isolate was performed in triplicates. Then the reaction mixtures were incubated for 2 hours at 370 C in an incubator. In this spectrophotometric assay, Tween was cleaved to produce fatty acid and alcohol. Presence of calcium in the reaction mixture leads to the formation of an insoluble fatty acid salt, giving a precipitate which can be measured spectrophotometrically at 400nm. One unit of Lipase activity was defined as the amount of enzyme resulted in an increase of optical density at 400nm (OD400) of 0.01 after 2 hours under the assay conditions [17]. Lipase activity of all isolated lipolytic Pseudomonas spp. was determined and expressed in U/ml. III. Results 3.1 Screening, Isolation and Identification of the isolates Total 49 (WP01-WP49) lipolytic Pseudomonas spp. were isolated from 14 oil contaminated water samples collected from different areas of Pune. All 49 lipolytic isolates were then identified upto genus level with the help of morphological and biochemical studies. All the lipolytic isolates were characterized as Gram negative, rod shaped, motile bacteria that are capable of hydrolysis of tributyrin (Fig. 1). A zone of clearance around the bacterial colonies was observed due to the hydrolysis of tributyrin after 48 hours of incubation. Figure 1. Zone of clearance around the colonies due to hydrolysis of tributyrin on Tributyrin agar containing Rhodamine B. 3.2 Lipase Assay Enzyme assay for each isolate was performed in triplicates. After performing the Lipase assay of these 49 lipolytic isolates, it was found that WP23 exhibits maximum enzymatic activity (Fig. 2). It was observed that WP23 possesses Lipase activity of about 45.4733 U/ml.
  • 3. Isolation and characterization of lipolytic Pseudomonas spp. from oil contaminated water samples www.iosrjournals.org 35 | Page Figure 2. Lipase activity of lipolytic Pseudomonas spp. isolated from water samples by spectrophotometric assay. 3.3 Identification of the selected lipolytic strain Morphological & biochemical characteristics of the lipolytic isolates were studied for the identification of the isolated bacteria. Lipolytic bacterial strain WP23 exhibit maximum Lipase activity as compared to the other strains as indicated in Figure 2. Morphological & biochemical studies of WP23 were carried out (Table 1). According to the Bergey’s manual of Systematic Bacteriology & 16SrDNA sequencing analysis, the isolate WP23 was identified and confirmed as Pseudomonas aeruginosa. Table 1: Morphological & Biochemical Characterization of WP23: WP23 Colony Characters Details Biochemical Tests Results Shape Circular Gram Staining Gram Negative Rods Size 2-3mm Motility Motile Color Creamy Indole Negative Margin Smooth Catalase Positive Opacity Opaque Nitrate Reduction Positive Elevation Slightly elevated Oxidase Positive Consistency Sticky Sugar Fermentation Glucose: Negative Sucrose: Negative Lactose: Negative Maltose: Negative Mannitol: Negative Pigment Green IV. Discussion Extracellular Lipase enzyme obtained from microbial origin possesses variety of applications in various industries. The present study helps us to understand the pre-existing industrial protocols for isolation and characterization of Lipase producing organisms. Lipolytic Pseudomonas spp. isolated from oil contaminated water samples possesses a high capability of extracellular Lipase production. Out of 49 isolates (WP01-WP49), WP23 exhibits optimum Lipase activity. By using Bergey’s manual of systemic Bacteriology and 16SrDNA sequencing analysis, WP23 was confirmed as Pseudomonas aeruginosa. The present study also reveals the fact that every lipolytic organisms isolated from oil contaminated water sample shows a wide diversity in the enzymatic activities. V. Conclusion In conclusion, a total of 49 lipolytic Pseudomonas spp. were isolated after screening 14 oil contaminated water samples collected from different areas in Pune. After performing the spectrophotometric Lipase assay, it was found that WP23 showed Lipase activity of about 45.4733 U/ml. As WP23 exhibits optimum Lipase activity amongst them, WP23 was further identified and characterized upto species level with the help of Bergey’s manual of systemic Bacteriology and 16SrDNA sequencing analysis. According to morphological and biochemical testing, WP23 was identified as Pseudomonas aeruginosa. WP23 can be effectively used for the extracellular Lipase enzyme production with the help of submerged fermentation. Optimization of fermentation parameters shall also play a crucial role in the enhanced production of Lipase enzyme.
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