SlideShare a Scribd company logo
1 of 21
 
 
 
HCV is a positive strand RNA viruse that has ben classified as the genus  Hepacivirus in the Flaviviridae  family. The HCV genome is uncapped,linear molecule with a leanth of 9600 nucleotides.it carries a long open reading frame that is flanked at the 5’- and 3’- ends by short highly structure non-translated regions(NTRs). 5’-NTR  has a lenth of about 340nt and contains an internal ribosome entry site (IRES) required for  translation  of the HCV genome.Prat of the  IRES(domain II)  overlaps with RNA signals essential for viral  replication .
[object Object],[object Object],[object Object],[object Object],Genetic studies have shown that a  poly(U/UC)  as well as the complete  X-tail  are required for RNA replication in cell culture and for infectivity of the viral genome  in vivo. An additional  cis- acting RNA element ( CRE )has been identified in the 3’-terminal coding region of  NS5B .this CRE (designated  5BSL3.2 )form a long distance RNA-RNA interaction with SL2 in the X-tail which is indispensable for RNA replication.
Expression of the viral proteins from the monocistronic genome is primarily achieved by production of a polyprotein that is proteolytically cleaved into the structural protien ( core , envelope proteins E1  and  E2 )the hydrophobic peptid  p7 ,and nonstructural(NS) proteins  NS2 , NS3 , NS4A , NS4B , NS5A  and  NS5B . Processing of the core to  p7  region is mediated by  host cell signalases  , and in the case of the  core protein  , in addition by signal  peptide peptidase .  ,[object Object],[object Object],[object Object]
COMPONENTS OF THE HCV REPLICATION COMPLEX Since the minimum components required for HCV RNA translation and replication are the  NTRs  and the  NS3  to  NS5B  coding region. NS3-serin-type protease: And its Cofactor  NS4A-NS3  is a bifunctional molecule  that carries the N-terminal 180 amino acids a serine-type protease.this enzyme has a typical chymotrypsin-like fold. NS3: Although NS3  possesses intrinsic proteolytic activity, polyprotien cleavage is dramatically   enhanced by the NS4A cofactor. 1. Anchors the protease to intracellular membranes via an N-terminal transmembrane segment present in NS4A 2. Cotributes one-strand to the N-terminal protease domain and thereby allows its complete folding 3. It stabilize the protease against proteolytic degradation 4. Activates protease activity by changing the geometry of the catalytic traid.
NS3 helicase : The C-terminal 400 amino acids of NS3 form a superfamily  2DE×H/D-box RNA helicase that is capable of unwinding RNA-RNA duplexes in an ATP-dependent manner.the protein binds to homopolymeric RNAs with a preference for poly(U) In fact , it was found that NS3 can cleave two components of the dsRNA signaling pathway ,[object Object],[object Object],Both adaptor Phosphorylation  of IFN regulatory factor-3 (IRF-3)  Transcription of IFN And Other antiviral genes
 
NS4B : Inducer of a membrane scaffold for the viral RC( replicase complex ) ? ,[object Object],[object Object]
 
 
1: Introduction 2: HCV associated SLVL: the beginning of the story 3:  HCV & mixed cryoglobulinemia 4:  Indirect transformation by protracted antigenic stimulation 5:HCV-associated large B Cell Lymphomas 6:Direct transformation of B cells by HCV 7: Conclusion 1: Introduction 2:HCV associated SLVL: the beginning of the story
DC CD81 BAFF/BLyS Anti-E2 IgM/RF B cell 3:  HCV & mixed cryoglobulinemia HCV
IgH-bcl2 ? Other oncogenic event INF α +Ribavirin INF α +Ribavirin
EBV  ( B, T, NK Cell Lymphoma ) Herpes virus ( kaposi sarcoma )  HTLV Helicobacter pylori Campylobacter jejuni ( immunoprolifrative small intestinal disease ) EBV Naïve resting B cell Activated B cell Immortalized  B cell Polyclonal prolifration Trasformed B cell;secondary oncogenic events 4:  Indirect transformation by protracted antigenic stimulation
5:HCV-associated large B Cell Lymphomas Aside from SLVL & other low-grade B cell NHL , HCV is Epidemiologically associated with DLBCL
HCV BCR E2 CD81 core NS3/4 NOS Mutations:Bcl6-Beta Catenin-P53 B CELL 6:Direct transformation of B cells by HCV
HCV E2 BCR CD81 CD21 CD19 Proliferation AID Somatic hypermutation of immunoglubolins B CELL Activation –induced deaminase
7: Conclusion
 

More Related Content

What's hot

2013 transcription
2013 transcription2013 transcription
2013 transcription
kuldip sodhi
 
Basic principle of transcription, organization of transcriptional units in pr...
Basic principle of transcription, organization of transcriptional units in pr...Basic principle of transcription, organization of transcriptional units in pr...
Basic principle of transcription, organization of transcriptional units in pr...
Brazen5559
 

What's hot (17)

2013 transcription
2013 transcription2013 transcription
2013 transcription
 
pET vectors
pET vectorspET vectors
pET vectors
 
RNA Genome and its replication
RNA Genome and its replicationRNA Genome and its replication
RNA Genome and its replication
 
Lecture 2a cosmids
Lecture 2a cosmidsLecture 2a cosmids
Lecture 2a cosmids
 
eukaryotic gene structure
 eukaryotic gene structure eukaryotic gene structure
eukaryotic gene structure
 
Expression vectors
Expression vectorsExpression vectors
Expression vectors
 
Rna pol ii
Rna pol iiRna pol ii
Rna pol ii
 
Transcription
TranscriptionTranscription
Transcription
 
artificial or synthetic transcription factor for regulation of gene expression
artificial or synthetic transcription factor for regulation of gene expressionartificial or synthetic transcription factor for regulation of gene expression
artificial or synthetic transcription factor for regulation of gene expression
 
Transcription in prokaryotes
Transcription in prokaryotesTranscription in prokaryotes
Transcription in prokaryotes
 
Reverse transcription of hiv 1 ..
Reverse transcription of hiv 1 ..Reverse transcription of hiv 1 ..
Reverse transcription of hiv 1 ..
 
RNA polymerase and transcription factor
 RNA polymerase and transcription factor RNA polymerase and transcription factor
RNA polymerase and transcription factor
 
Transcription in prokaryotes
Transcription in prokaryotesTranscription in prokaryotes
Transcription in prokaryotes
 
Translation in Pro and Eu karyotes
Translation in Pro  and Eu karyotesTranslation in Pro  and Eu karyotes
Translation in Pro and Eu karyotes
 
Basic principle of transcription, organization of transcriptional units in pr...
Basic principle of transcription, organization of transcriptional units in pr...Basic principle of transcription, organization of transcriptional units in pr...
Basic principle of transcription, organization of transcriptional units in pr...
 
Transcription
TranscriptionTranscription
Transcription
 
Critical components of p et,pcdna and cmv expression vectors
Critical components of p et,pcdna and cmv expression vectorsCritical components of p et,pcdna and cmv expression vectors
Critical components of p et,pcdna and cmv expression vectors
 

Similar to HCV & SLVL

An overview of hiv biology2 1.08.2011
An overview of hiv biology2 1.08.2011An overview of hiv biology2 1.08.2011
An overview of hiv biology2 1.08.2011
Upasana Ganguly
 
Retroviruses Compressed
Retroviruses CompressedRetroviruses Compressed
Retroviruses Compressed
guestc0268e
 
1088873494RNA Editing: RNA Editing and CRISPR technology
1088873494RNA Editing: RNA Editing and CRISPR technology1088873494RNA Editing: RNA Editing and CRISPR technology
1088873494RNA Editing: RNA Editing and CRISPR technology
BijayalaxmiSahoo40
 

Similar to HCV & SLVL (20)

06. REVERSE TRANSCRIPTION, HIV AND ARVs.pptx
06. REVERSE TRANSCRIPTION, HIV AND ARVs.pptx06. REVERSE TRANSCRIPTION, HIV AND ARVs.pptx
06. REVERSE TRANSCRIPTION, HIV AND ARVs.pptx
 
Virology of HCV
Virology of HCVVirology of HCV
Virology of HCV
 
RTPCRpresentationAmanNanavatySlideShow.pdf
RTPCRpresentationAmanNanavatySlideShow.pdfRTPCRpresentationAmanNanavatySlideShow.pdf
RTPCRpresentationAmanNanavatySlideShow.pdf
 
An overview of hiv biology2 1.08.2011
An overview of hiv biology2 1.08.2011An overview of hiv biology2 1.08.2011
An overview of hiv biology2 1.08.2011
 
SARS-CoV-2 and COVID-19 _ Taxonomy, Genetics, Life Cycle, Pathophysiology, Tr...
SARS-CoV-2 and COVID-19 _ Taxonomy, Genetics, Life Cycle, Pathophysiology, Tr...SARS-CoV-2 and COVID-19 _ Taxonomy, Genetics, Life Cycle, Pathophysiology, Tr...
SARS-CoV-2 and COVID-19 _ Taxonomy, Genetics, Life Cycle, Pathophysiology, Tr...
 
Sars co v-2 and covid-19 ; taxonomy, genetics, life cycle, pathophysiology, t...
Sars co v-2 and covid-19 ; taxonomy, genetics, life cycle, pathophysiology, t...Sars co v-2 and covid-19 ; taxonomy, genetics, life cycle, pathophysiology, t...
Sars co v-2 and covid-19 ; taxonomy, genetics, life cycle, pathophysiology, t...
 
Viruses as vector, binary, shuttle vector
Viruses as vector, binary, shuttle vectorViruses as vector, binary, shuttle vector
Viruses as vector, binary, shuttle vector
 
GENETIC EXPRESSION TRANSCRIPTION.pptx
GENETIC EXPRESSION TRANSCRIPTION.pptxGENETIC EXPRESSION TRANSCRIPTION.pptx
GENETIC EXPRESSION TRANSCRIPTION.pptx
 
Retroviruses Compressed
Retroviruses CompressedRetroviruses Compressed
Retroviruses Compressed
 
Replication of RNA viruses.ppt
Replication of RNA viruses.pptReplication of RNA viruses.ppt
Replication of RNA viruses.ppt
 
Hepatitis C (HCV).pptx
Hepatitis C (HCV).pptxHepatitis C (HCV).pptx
Hepatitis C (HCV).pptx
 
CORONAVIRIDAE general introduction into family
CORONAVIRIDAE general introduction into familyCORONAVIRIDAE general introduction into family
CORONAVIRIDAE general introduction into family
 
Sars cov 2 spike protein
Sars cov 2 spike proteinSars cov 2 spike protein
Sars cov 2 spike protein
 
Rna polymerase
Rna polymeraseRna polymerase
Rna polymerase
 
Hepatitis C (HCV).pptx
Hepatitis C (HCV).pptxHepatitis C (HCV).pptx
Hepatitis C (HCV).pptx
 
DNA Transcription (Pharmaceutical Biotechnology)
DNA Transcription (Pharmaceutical Biotechnology)DNA Transcription (Pharmaceutical Biotechnology)
DNA Transcription (Pharmaceutical Biotechnology)
 
Eukaryotic Transcription.pptx
Eukaryotic Transcription.pptxEukaryotic Transcription.pptx
Eukaryotic Transcription.pptx
 
Genotype and phenotype of covid 19
Genotype and phenotype of covid 19Genotype and phenotype of covid 19
Genotype and phenotype of covid 19
 
4,transcription
4,transcription4,transcription
4,transcription
 
1088873494RNA Editing: RNA Editing and CRISPR technology
1088873494RNA Editing: RNA Editing and CRISPR technology1088873494RNA Editing: RNA Editing and CRISPR technology
1088873494RNA Editing: RNA Editing and CRISPR technology
 

More from najmaldin saki (20)

Stam Cell Niche
Stam Cell NicheStam Cell Niche
Stam Cell Niche
 
Najmaldin Saki Signaling Pathway
Najmaldin Saki Signaling PathwayNajmaldin Saki Signaling Pathway
Najmaldin Saki Signaling Pathway
 
Cell Biology
Cell BiologyCell Biology
Cell Biology
 
Fantastic Trip...God Is Great
Fantastic Trip...God Is GreatFantastic Trip...God Is Great
Fantastic Trip...God Is Great
 
Sus or shush or Susana
Sus or shush or SusanaSus or shush or Susana
Sus or shush or Susana
 
Anemia IDA
Anemia IDAAnemia IDA
Anemia IDA
 
Beta Thalassemia najmaldin saki
Beta Thalassemia najmaldin sakiBeta Thalassemia najmaldin saki
Beta Thalassemia najmaldin saki
 
Blood Banking
Blood BankingBlood Banking
Blood Banking
 
Hoxa9hoxb3hoxb4
Hoxa9hoxb3hoxb4Hoxa9hoxb3hoxb4
Hoxa9hoxb3hoxb4
 
Anemia Of Chronich Disease
Anemia Of Chronich DiseaseAnemia Of Chronich Disease
Anemia Of Chronich Disease
 
Sickle Cell Disease
Sickle Cell DiseaseSickle Cell Disease
Sickle Cell Disease
 
Alpha Thalasemia
Alpha ThalasemiaAlpha Thalasemia
Alpha Thalasemia
 
V. Hyper Coagulation State
V. Hyper Coagulation StateV. Hyper Coagulation State
V. Hyper Coagulation State
 
transcription factor Ikaros
transcription factor Ikarostranscription factor Ikaros
transcription factor Ikaros
 
DNA repair
DNA repairDNA repair
DNA repair
 
Transcription Factors
Transcription FactorsTranscription Factors
Transcription Factors
 
Pnh & Aaa
Pnh & AaaPnh & Aaa
Pnh & Aaa
 
M Rna.Translation
M Rna.TranslationM Rna.Translation
M Rna.Translation
 
Apoptosis
ApoptosisApoptosis
Apoptosis
 
3 Regulation Of Cxcr4 Signaling By Najmaldin Saki (2)
3 Regulation Of Cxcr4 Signaling By Najmaldin Saki (2)3 Regulation Of Cxcr4 Signaling By Najmaldin Saki (2)
3 Regulation Of Cxcr4 Signaling By Najmaldin Saki (2)
 

Recently uploaded

Cloud Frontiers: A Deep Dive into Serverless Spatial Data and FME
Cloud Frontiers:  A Deep Dive into Serverless Spatial Data and FMECloud Frontiers:  A Deep Dive into Serverless Spatial Data and FME
Cloud Frontiers: A Deep Dive into Serverless Spatial Data and FME
Safe Software
 
Modular Monolith - a Practical Alternative to Microservices @ Devoxx UK 2024
Modular Monolith - a Practical Alternative to Microservices @ Devoxx UK 2024Modular Monolith - a Practical Alternative to Microservices @ Devoxx UK 2024
Modular Monolith - a Practical Alternative to Microservices @ Devoxx UK 2024
Victor Rentea
 
Architecting Cloud Native Applications
Architecting Cloud Native ApplicationsArchitecting Cloud Native Applications
Architecting Cloud Native Applications
WSO2
 
TrustArc Webinar - Unified Trust Center for Privacy, Security, Compliance, an...
TrustArc Webinar - Unified Trust Center for Privacy, Security, Compliance, an...TrustArc Webinar - Unified Trust Center for Privacy, Security, Compliance, an...
TrustArc Webinar - Unified Trust Center for Privacy, Security, Compliance, an...
TrustArc
 

Recently uploaded (20)

ChatGPT and Beyond - Elevating DevOps Productivity
ChatGPT and Beyond - Elevating DevOps ProductivityChatGPT and Beyond - Elevating DevOps Productivity
ChatGPT and Beyond - Elevating DevOps Productivity
 
Platformless Horizons for Digital Adaptability
Platformless Horizons for Digital AdaptabilityPlatformless Horizons for Digital Adaptability
Platformless Horizons for Digital Adaptability
 
API Governance and Monetization - The evolution of API governance
API Governance and Monetization -  The evolution of API governanceAPI Governance and Monetization -  The evolution of API governance
API Governance and Monetization - The evolution of API governance
 
Quantum Leap in Next-Generation Computing
Quantum Leap in Next-Generation ComputingQuantum Leap in Next-Generation Computing
Quantum Leap in Next-Generation Computing
 
Cloud Frontiers: A Deep Dive into Serverless Spatial Data and FME
Cloud Frontiers:  A Deep Dive into Serverless Spatial Data and FMECloud Frontiers:  A Deep Dive into Serverless Spatial Data and FME
Cloud Frontiers: A Deep Dive into Serverless Spatial Data and FME
 
Modernizing Legacy Systems Using Ballerina
Modernizing Legacy Systems Using BallerinaModernizing Legacy Systems Using Ballerina
Modernizing Legacy Systems Using Ballerina
 
Connector Corner: Accelerate revenue generation using UiPath API-centric busi...
Connector Corner: Accelerate revenue generation using UiPath API-centric busi...Connector Corner: Accelerate revenue generation using UiPath API-centric busi...
Connector Corner: Accelerate revenue generation using UiPath API-centric busi...
 
Vector Search -An Introduction in Oracle Database 23ai.pptx
Vector Search -An Introduction in Oracle Database 23ai.pptxVector Search -An Introduction in Oracle Database 23ai.pptx
Vector Search -An Introduction in Oracle Database 23ai.pptx
 
DBX First Quarter 2024 Investor Presentation
DBX First Quarter 2024 Investor PresentationDBX First Quarter 2024 Investor Presentation
DBX First Quarter 2024 Investor Presentation
 
Modular Monolith - a Practical Alternative to Microservices @ Devoxx UK 2024
Modular Monolith - a Practical Alternative to Microservices @ Devoxx UK 2024Modular Monolith - a Practical Alternative to Microservices @ Devoxx UK 2024
Modular Monolith - a Practical Alternative to Microservices @ Devoxx UK 2024
 
AI in Action: Real World Use Cases by Anitaraj
AI in Action: Real World Use Cases by AnitarajAI in Action: Real World Use Cases by Anitaraj
AI in Action: Real World Use Cases by Anitaraj
 
TrustArc Webinar - Unlock the Power of AI-Driven Data Discovery
TrustArc Webinar - Unlock the Power of AI-Driven Data DiscoveryTrustArc Webinar - Unlock the Power of AI-Driven Data Discovery
TrustArc Webinar - Unlock the Power of AI-Driven Data Discovery
 
TEST BANK For Principles of Anatomy and Physiology, 16th Edition by Gerard J....
TEST BANK For Principles of Anatomy and Physiology, 16th Edition by Gerard J....TEST BANK For Principles of Anatomy and Physiology, 16th Edition by Gerard J....
TEST BANK For Principles of Anatomy and Physiology, 16th Edition by Gerard J....
 
Rising Above_ Dubai Floods and the Fortitude of Dubai International Airport.pdf
Rising Above_ Dubai Floods and the Fortitude of Dubai International Airport.pdfRising Above_ Dubai Floods and the Fortitude of Dubai International Airport.pdf
Rising Above_ Dubai Floods and the Fortitude of Dubai International Airport.pdf
 
Polkadot JAM Slides - Token2049 - By Dr. Gavin Wood
Polkadot JAM Slides - Token2049 - By Dr. Gavin WoodPolkadot JAM Slides - Token2049 - By Dr. Gavin Wood
Polkadot JAM Slides - Token2049 - By Dr. Gavin Wood
 
Corporate and higher education May webinar.pptx
Corporate and higher education May webinar.pptxCorporate and higher education May webinar.pptx
Corporate and higher education May webinar.pptx
 
Six Myths about Ontologies: The Basics of Formal Ontology
Six Myths about Ontologies: The Basics of Formal OntologySix Myths about Ontologies: The Basics of Formal Ontology
Six Myths about Ontologies: The Basics of Formal Ontology
 
Design and Development of a Provenance Capture Platform for Data Science
Design and Development of a Provenance Capture Platform for Data ScienceDesign and Development of a Provenance Capture Platform for Data Science
Design and Development of a Provenance Capture Platform for Data Science
 
Architecting Cloud Native Applications
Architecting Cloud Native ApplicationsArchitecting Cloud Native Applications
Architecting Cloud Native Applications
 
TrustArc Webinar - Unified Trust Center for Privacy, Security, Compliance, an...
TrustArc Webinar - Unified Trust Center for Privacy, Security, Compliance, an...TrustArc Webinar - Unified Trust Center for Privacy, Security, Compliance, an...
TrustArc Webinar - Unified Trust Center for Privacy, Security, Compliance, an...
 

HCV & SLVL

  • 1.  
  • 2.  
  • 3.  
  • 4. HCV is a positive strand RNA viruse that has ben classified as the genus Hepacivirus in the Flaviviridae family. The HCV genome is uncapped,linear molecule with a leanth of 9600 nucleotides.it carries a long open reading frame that is flanked at the 5’- and 3’- ends by short highly structure non-translated regions(NTRs). 5’-NTR has a lenth of about 340nt and contains an internal ribosome entry site (IRES) required for translation of the HCV genome.Prat of the IRES(domain II) overlaps with RNA signals essential for viral replication .
  • 5.
  • 6.
  • 7. COMPONENTS OF THE HCV REPLICATION COMPLEX Since the minimum components required for HCV RNA translation and replication are the NTRs and the NS3 to NS5B coding region. NS3-serin-type protease: And its Cofactor NS4A-NS3 is a bifunctional molecule that carries the N-terminal 180 amino acids a serine-type protease.this enzyme has a typical chymotrypsin-like fold. NS3: Although NS3 possesses intrinsic proteolytic activity, polyprotien cleavage is dramatically enhanced by the NS4A cofactor. 1. Anchors the protease to intracellular membranes via an N-terminal transmembrane segment present in NS4A 2. Cotributes one-strand to the N-terminal protease domain and thereby allows its complete folding 3. It stabilize the protease against proteolytic degradation 4. Activates protease activity by changing the geometry of the catalytic traid.
  • 8.
  • 9.  
  • 10.
  • 11.  
  • 12.  
  • 13. 1: Introduction 2: HCV associated SLVL: the beginning of the story 3: HCV & mixed cryoglobulinemia 4: Indirect transformation by protracted antigenic stimulation 5:HCV-associated large B Cell Lymphomas 6:Direct transformation of B cells by HCV 7: Conclusion 1: Introduction 2:HCV associated SLVL: the beginning of the story
  • 14. DC CD81 BAFF/BLyS Anti-E2 IgM/RF B cell 3: HCV & mixed cryoglobulinemia HCV
  • 15. IgH-bcl2 ? Other oncogenic event INF α +Ribavirin INF α +Ribavirin
  • 16. EBV ( B, T, NK Cell Lymphoma ) Herpes virus ( kaposi sarcoma ) HTLV Helicobacter pylori Campylobacter jejuni ( immunoprolifrative small intestinal disease ) EBV Naïve resting B cell Activated B cell Immortalized B cell Polyclonal prolifration Trasformed B cell;secondary oncogenic events 4: Indirect transformation by protracted antigenic stimulation
  • 17. 5:HCV-associated large B Cell Lymphomas Aside from SLVL & other low-grade B cell NHL , HCV is Epidemiologically associated with DLBCL
  • 18. HCV BCR E2 CD81 core NS3/4 NOS Mutations:Bcl6-Beta Catenin-P53 B CELL 6:Direct transformation of B cells by HCV
  • 19. HCV E2 BCR CD81 CD21 CD19 Proliferation AID Somatic hypermutation of immunoglubolins B CELL Activation –induced deaminase
  • 21.  

Editor's Notes

  1. Splenic lemphoma with villous lymphocytes,mixed cryoglobulinemia and HCV infection:deciphering the role of HCV in B-cell lymphomagenesis