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Geographical Limits to the Utility of a
Spectral Library Derived from 6-band sUAS
Data for a Particular Riparian Extent
Holly Wilkie
wilkieh@unm.edu
GIS in the Rockies
19 September 2018
Biodiversity and Adaptive Capacity
“One of the ways in which our world is
shrinking is a loss of biodiversity-the
diversity of life, its variety of species,
the genes they contain, and the
ecosystems they make up. As we lose
biodiversity, we lose options.”
(Walker, B. & Salt, D., 2006, Chapter 6, Box 9)
River Restoration Challenges
“River restoration is increasingly viewed as a
litmus test for the hydrologic and ecological
sciences...( yet) Many projects designed to
restore rivers are currently being conducted
throughout the United States with minimal
scientific context. Specifically, many projects
lack... longterm monitoring of success or failure
in meeting project objectives following
completion.”
(Wohl, et. al., 2005, p. 1)
STUDY EXTENT
Flight Plan
MISSION I: LEAF-OFF
• Flat light produced high-quality
Orthophoto
• MAPIR failed to collect JPGs, making
RAW files impossible to convert
• Ground Extraction and Classification in LASTools
• DEM creation in CloudCompare
• Dataset bowed down in middle because of lack
of ground control
MISSION II: LEAF-ON
• Lighting conditions produced harsh
image, choppy water
• MAPIR multispectral and DJI RGB
imagery captured
Obstacles to Classification
• Healthy, diverse vegetation is difficult to spatially isolate by species
• Willows and Saltcedar have not yet leafed out
• Weak NIR response in Russian Olives
• Dense vegetation inhibits free movement throughout extent
NDVI
• Absent spectral library, NDVI
indicates vegetation health or forest
progression
Requirements for Successful Use of sUAS Monitoring
in the Middle Rio Grande Bosque
⚫ DJI Phantom IV Advanced sUAS (UNM)
⚫ MAPIR Survey III Multispectral RGN Camera (UNM)
⚫ Structure from Motion (SfM) Software
⚫ Agisoft Photoscan Student License
⚫ Classification with Machine Learning
⚫ ENVI One (1) Year license
⚫ Storage for backing up large datasets
⚫ Travel to and from Bosque del Apache National Wildlife Refuge
Interested Parties
▪ Rio Grande Conservancy District
▪ Can provide access to levee roads
▪ Bureau of Reclamation
▪ Studies invasive species
▪ Promotes endangered species conservation
▪ Bosque Ecosystem Monitoring Program (BEMP)
▪ Citizen Science
Geographical Limits to
the Utility of a Spectral
Library Derived from 6-
band sUAS Data for a
Particular Riparian
Extent
Holly Wilkie
wilkieh@unm.edu
GIS in the Rockies
19 September 2018
References
Walker, B., & Salt, D., (2006) Resilience Thinking: Sustaining Ecosystems and
People in a Changing World. Washington, DC. Island.
Wohl, E., Angermeier, P., Bledsoe, B., Kondolf, G.M., MacDonnell, L., Merritt, D.,
Palmer, M., Poff, N.L. & Tarboton, D., (2005) River Restoration, Water
Resources Research, Vol. 41, W10301, doi:10.1029/2005WR003985.

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2018 GIS in Education: sUAS Data For a Particular Riparian Extent

  • 1. Geographical Limits to the Utility of a Spectral Library Derived from 6-band sUAS Data for a Particular Riparian Extent Holly Wilkie wilkieh@unm.edu GIS in the Rockies 19 September 2018
  • 2. Biodiversity and Adaptive Capacity “One of the ways in which our world is shrinking is a loss of biodiversity-the diversity of life, its variety of species, the genes they contain, and the ecosystems they make up. As we lose biodiversity, we lose options.” (Walker, B. & Salt, D., 2006, Chapter 6, Box 9)
  • 3. River Restoration Challenges “River restoration is increasingly viewed as a litmus test for the hydrologic and ecological sciences...( yet) Many projects designed to restore rivers are currently being conducted throughout the United States with minimal scientific context. Specifically, many projects lack... longterm monitoring of success or failure in meeting project objectives following completion.” (Wohl, et. al., 2005, p. 1)
  • 6. MISSION I: LEAF-OFF • Flat light produced high-quality Orthophoto • MAPIR failed to collect JPGs, making RAW files impossible to convert
  • 7. • Ground Extraction and Classification in LASTools • DEM creation in CloudCompare • Dataset bowed down in middle because of lack of ground control
  • 8. MISSION II: LEAF-ON • Lighting conditions produced harsh image, choppy water • MAPIR multispectral and DJI RGB imagery captured
  • 9. Obstacles to Classification • Healthy, diverse vegetation is difficult to spatially isolate by species • Willows and Saltcedar have not yet leafed out • Weak NIR response in Russian Olives • Dense vegetation inhibits free movement throughout extent
  • 10. NDVI • Absent spectral library, NDVI indicates vegetation health or forest progression
  • 11. Requirements for Successful Use of sUAS Monitoring in the Middle Rio Grande Bosque ⚫ DJI Phantom IV Advanced sUAS (UNM) ⚫ MAPIR Survey III Multispectral RGN Camera (UNM) ⚫ Structure from Motion (SfM) Software ⚫ Agisoft Photoscan Student License ⚫ Classification with Machine Learning ⚫ ENVI One (1) Year license ⚫ Storage for backing up large datasets ⚫ Travel to and from Bosque del Apache National Wildlife Refuge
  • 12. Interested Parties ▪ Rio Grande Conservancy District ▪ Can provide access to levee roads ▪ Bureau of Reclamation ▪ Studies invasive species ▪ Promotes endangered species conservation ▪ Bosque Ecosystem Monitoring Program (BEMP) ▪ Citizen Science
  • 13. Geographical Limits to the Utility of a Spectral Library Derived from 6- band sUAS Data for a Particular Riparian Extent Holly Wilkie wilkieh@unm.edu GIS in the Rockies 19 September 2018
  • 14. References Walker, B., & Salt, D., (2006) Resilience Thinking: Sustaining Ecosystems and People in a Changing World. Washington, DC. Island. Wohl, E., Angermeier, P., Bledsoe, B., Kondolf, G.M., MacDonnell, L., Merritt, D., Palmer, M., Poff, N.L. & Tarboton, D., (2005) River Restoration, Water Resources Research, Vol. 41, W10301, doi:10.1029/2005WR003985.