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TROPICAL TREE SPECIES DELINEATION UTILIZING
HIGH-RESOLUTION SATELLITE IMAGERY FOR
IMPROVED ABOVE-GROUND BIOMASS ESTIMATES
Matthew D. Cross
University of Colorado Denver
Introduction
• Carbon concentrations have changed
significantly
• Vegetation - a control for carbon
–Tropical forests - deforestation
• Uncertainties exist in current biomass
estimates
• An improved process for a above-ground
measure of biomass is needed
–Accurately assess the role of tropical forest
on the global climate
La Selva Biological Station, Costa Rica
• Premier site for
lowland rainforest
research
• Managed by
Organization for
Tropical Studies
• NE Portion of Braulio
Carrillo National Park
La Selva Biological Station, Costa Rica
• 5,000 species of vascular
plants
• 700 species of trees
La Selva
Biological
Station
Verification
Data Sources
• Analytical Spectral Devices (ASD) FieldSpec Pro
Spectroradiometer (300 – 2500 nm)
• Sampling interval from 1.4 nm (350 – 1000 nm) to 2 nm (1000
– 2500nm)
• Output -- digital number or percent reflectance
Data Sources
• WorldView-3 Image
• November 11, 2014
– off-nadir data collection -- 26.2°
– azimuth view angle -- 108.8°
• Cloud cover = 0.5%
• Spatial Resolution
– 1.24 m multispectral
– 0.31 cm panchromatic
• Radiometric Resolution
– 11 bits/pixel
• Spectral Resolution
– 8 bands (multispectral)
– 1 panchromatic band
Bands Spectral Range (nm)
Panchromatic 450 - 800
Costal 400 – 450
Blue 450 – 510
Green 510 – 580
Yellow 585 – 625
Red 630 – 690
Red Edge 705 – 745
Near-IR1 770 – 895
Near-IR2 860 – 1040
Towers 1 and 2
Tower Locations
ASD Data
– Processed in MATLAB to WV-3 surface reflectance
– Used Radiance Response Curves for each WV-3 band
– Calculated for each tree collected
Original
AComp
C. Elastica
(df=3)
I. marginata
(df=14)
L. Procera
(df=2)
O. floribunda
(df=7)
P. macroloba
(df=12)
WV-3
Bands
t Sig. t Sig. t Sig. t Sig. t Sig.
Coastal 5.773 0.010 18.610 0.000 6.980 0.020 7.656 0.000 13.109 0.000
Blue 0.056 0.959 6.369 0.000 1.555 0.260 2.028 0.082 5.333 0.000
Green 1.167 0.328 2.681 0.018 1.543 0.263 -0.176 0.866 0.176 0.863
Yellow -2.876 0.064 2.228 0.043 -0.241 0.832 -2.384 0.049 -3.229 0.007
Red -4.282 0.023 4.256 0.001 -5.353 0.033 -2.045 0.080 -4.527 0.001
Red Edge -1.889 0.155 1.281 0.221 2.222 0.156 0.867 0.414 0.015 0.988
Near IR1 0.219 0.841 -0.267 0.794 -0.508 0.662 -0.165 0.874 0.562 0.584
Near IR2 0.020 0.985 0.070 0.945 0.776 0.519 0.308 0.767 -0.524 0.610
R. kunthiana
(df=4)
S. microstachyum
(df=9)
S. Mombin
(df=6)
Z. longifolia
(df=17)
WV-3
Bands
t Sig t Sig t Sig t Sig
Coastal 2.231 0.089 -4.190 0.002 0.058 0.956 16.439 0.000
Blue -4.899 0.008 -26.598 0.000 -9.580 0.000 12.637 0.000
Green -2.641 0.058 -31.894 0.000 -9.445 0.000 -0.069 0.946
Yellow -7.194 0.002 -31.851 0.000 -17.995 0.000 -0.391 0.701
Red -12.525 0.000 -23.180 0.000 -16.470 0.000 2.288 0.035
Red Edge -0.759 0.490 -2.641 0.027 -3.136 0.020 -0.837 0.414
Near IR1 0.335 0.754 -0.045 0.965 0.406 0.699 1.140 0.270
Near IR2 0.164 0.878 0.193 0.852 -0.553 0.600 0.613 0.548
Classification
Tree Species Family
Approximate
Location
Canopy Total Total pixels
Collection Size
(m2)
Castilla elastica Moraceae
Lab area and west
La Selva
3 81 100.44
Cedrela odorata Meliaceae
Lab area and east
La Selva
2 81 100.44
Cordia alliodora Boraginaceae
Arboretum trail
from lab
2 39 48.36
Pentaclethra
macroloba
Fabaceae
Station entrance
and west
La Selva
9 217 269.08
Pterocarpus sp. A Fabaceae
Lab area and
east La Selva
2 128 158.72
Stryphnodendron
microstachyum
Fabaceae
Station entrance
and lab area
3 87 107.88
Spectral Vegetation Indices
• Used for assessing plant health, vegetation extent,
biomass
• Two newly developed SVIs for La Selva
– WV-ACRI (WorldView Average Canopy Reference Index)
𝑊𝑉𝐴𝐶𝑅𝐼 =
𝑁𝐼𝑅1 − ACnir1 + 𝑁𝐼𝑅2 − 𝐴𝐶𝑛𝑖𝑟2
2
+
𝐺𝑟𝑒𝑒𝑛 − 𝐴𝐶𝑔𝑟𝑛 + 𝑌𝑒𝑙𝑙𝑜𝑤 − 𝐴𝐶𝑦𝑒𝑙 + (𝑅𝑒𝑑𝐸𝑑𝑔𝑒 − 𝐴𝐶𝑟𝑒)
– WV-RESWI (WorldView Red Edge Slope Weighted Index)
𝑊𝑉𝑅𝐸𝑆𝑊𝐼 =
𝑁𝐼𝑅1 − 𝑅𝑒𝑑
0.173
∗ 𝑅𝑒𝑑𝐸𝑑𝑔𝑒
Band Locations Wilks’ Lambda F-test
Costal 0.862 20.090
Blue 0.662 64.082
Green 0.717 49.514
Yellow 0.710 51.138
Red 0.626 74.983
Red Edge 0.560 98.605
Near-IR1 0.500 125.583
Near-IR2 0.529 111.681
WV-ACRI 0.529 111.568
WV-RESWI 0.485 133.042
C. elastica – green
C. odorata – blue
C. alliodora – red
P. macroloba – yellow
P. sp. A – teal
S. microstachyum –
magenta
Bands/Index Used: Dependent on Rule-set for each Species
Overall Accuracy = 85.37%, Kappa = 0.808
Field Reference
Classification
C.
elastica
C.
odorata
C.
alliodora
P.
macroloba
P.
sp. A
S.
micro.
Total Users Acc.
C. elastica 2 2 100%
C. odorata 3 1 4 75.00%
C. alliodora 1 11 12 91.67%
P. macroloba 13 13 100%
P. sp. A 1 5 6 83.33%
S. micro. 1 1 100%
Unknown 1 1 1 3
Total 3 3 12 15 7 1 41
Prod. Acc. 66.67% 100% 91.67% 86.67% 71.43% 100% 85.37%
Future Research
• Biomass calculations
• Longitudinal studies (before/after)
• Forest inventory
• Forest diversity (clear cut)
• Forest Health (pine beetle pic)
• Archaeological findings/infrastructure (china)
• Bi-directional reflectance improvements
Thank You

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2018 ASPRS: Big Data: Classification of Tropical Forest Tree Species Using High-Resolution Imagery for Improved Above Ground Biomass Estimates

  • 1. TROPICAL TREE SPECIES DELINEATION UTILIZING HIGH-RESOLUTION SATELLITE IMAGERY FOR IMPROVED ABOVE-GROUND BIOMASS ESTIMATES Matthew D. Cross University of Colorado Denver
  • 2. Introduction • Carbon concentrations have changed significantly • Vegetation - a control for carbon –Tropical forests - deforestation • Uncertainties exist in current biomass estimates • An improved process for a above-ground measure of biomass is needed –Accurately assess the role of tropical forest on the global climate
  • 3. La Selva Biological Station, Costa Rica
  • 4. • Premier site for lowland rainforest research • Managed by Organization for Tropical Studies • NE Portion of Braulio Carrillo National Park La Selva Biological Station, Costa Rica • 5,000 species of vascular plants • 700 species of trees
  • 7. Data Sources • Analytical Spectral Devices (ASD) FieldSpec Pro Spectroradiometer (300 – 2500 nm) • Sampling interval from 1.4 nm (350 – 1000 nm) to 2 nm (1000 – 2500nm) • Output -- digital number or percent reflectance
  • 8. Data Sources • WorldView-3 Image • November 11, 2014 – off-nadir data collection -- 26.2° – azimuth view angle -- 108.8° • Cloud cover = 0.5% • Spatial Resolution – 1.24 m multispectral – 0.31 cm panchromatic • Radiometric Resolution – 11 bits/pixel • Spectral Resolution – 8 bands (multispectral) – 1 panchromatic band Bands Spectral Range (nm) Panchromatic 450 - 800 Costal 400 – 450 Blue 450 – 510 Green 510 – 580 Yellow 585 – 625 Red 630 – 690 Red Edge 705 – 745 Near-IR1 770 – 895 Near-IR2 860 – 1040
  • 9.
  • 10.
  • 12.
  • 13.
  • 14.
  • 16.
  • 17.
  • 18.
  • 19.
  • 20.
  • 21.
  • 22. ASD Data – Processed in MATLAB to WV-3 surface reflectance – Used Radiance Response Curves for each WV-3 band – Calculated for each tree collected
  • 23.
  • 25. AComp
  • 26.
  • 27.
  • 28. C. Elastica (df=3) I. marginata (df=14) L. Procera (df=2) O. floribunda (df=7) P. macroloba (df=12) WV-3 Bands t Sig. t Sig. t Sig. t Sig. t Sig. Coastal 5.773 0.010 18.610 0.000 6.980 0.020 7.656 0.000 13.109 0.000 Blue 0.056 0.959 6.369 0.000 1.555 0.260 2.028 0.082 5.333 0.000 Green 1.167 0.328 2.681 0.018 1.543 0.263 -0.176 0.866 0.176 0.863 Yellow -2.876 0.064 2.228 0.043 -0.241 0.832 -2.384 0.049 -3.229 0.007 Red -4.282 0.023 4.256 0.001 -5.353 0.033 -2.045 0.080 -4.527 0.001 Red Edge -1.889 0.155 1.281 0.221 2.222 0.156 0.867 0.414 0.015 0.988 Near IR1 0.219 0.841 -0.267 0.794 -0.508 0.662 -0.165 0.874 0.562 0.584 Near IR2 0.020 0.985 0.070 0.945 0.776 0.519 0.308 0.767 -0.524 0.610
  • 29. R. kunthiana (df=4) S. microstachyum (df=9) S. Mombin (df=6) Z. longifolia (df=17) WV-3 Bands t Sig t Sig t Sig t Sig Coastal 2.231 0.089 -4.190 0.002 0.058 0.956 16.439 0.000 Blue -4.899 0.008 -26.598 0.000 -9.580 0.000 12.637 0.000 Green -2.641 0.058 -31.894 0.000 -9.445 0.000 -0.069 0.946 Yellow -7.194 0.002 -31.851 0.000 -17.995 0.000 -0.391 0.701 Red -12.525 0.000 -23.180 0.000 -16.470 0.000 2.288 0.035 Red Edge -0.759 0.490 -2.641 0.027 -3.136 0.020 -0.837 0.414 Near IR1 0.335 0.754 -0.045 0.965 0.406 0.699 1.140 0.270 Near IR2 0.164 0.878 0.193 0.852 -0.553 0.600 0.613 0.548
  • 31.
  • 32.
  • 33.
  • 34.
  • 35.
  • 36.
  • 37. Tree Species Family Approximate Location Canopy Total Total pixels Collection Size (m2) Castilla elastica Moraceae Lab area and west La Selva 3 81 100.44 Cedrela odorata Meliaceae Lab area and east La Selva 2 81 100.44 Cordia alliodora Boraginaceae Arboretum trail from lab 2 39 48.36 Pentaclethra macroloba Fabaceae Station entrance and west La Selva 9 217 269.08 Pterocarpus sp. A Fabaceae Lab area and east La Selva 2 128 158.72 Stryphnodendron microstachyum Fabaceae Station entrance and lab area 3 87 107.88
  • 38.
  • 39. Spectral Vegetation Indices • Used for assessing plant health, vegetation extent, biomass • Two newly developed SVIs for La Selva – WV-ACRI (WorldView Average Canopy Reference Index) 𝑊𝑉𝐴𝐶𝑅𝐼 = 𝑁𝐼𝑅1 − ACnir1 + 𝑁𝐼𝑅2 − 𝐴𝐶𝑛𝑖𝑟2 2 + 𝐺𝑟𝑒𝑒𝑛 − 𝐴𝐶𝑔𝑟𝑛 + 𝑌𝑒𝑙𝑙𝑜𝑤 − 𝐴𝐶𝑦𝑒𝑙 + (𝑅𝑒𝑑𝐸𝑑𝑔𝑒 − 𝐴𝐶𝑟𝑒) – WV-RESWI (WorldView Red Edge Slope Weighted Index) 𝑊𝑉𝑅𝐸𝑆𝑊𝐼 = 𝑁𝐼𝑅1 − 𝑅𝑒𝑑 0.173 ∗ 𝑅𝑒𝑑𝐸𝑑𝑔𝑒
  • 40.
  • 41. Band Locations Wilks’ Lambda F-test Costal 0.862 20.090 Blue 0.662 64.082 Green 0.717 49.514 Yellow 0.710 51.138 Red 0.626 74.983 Red Edge 0.560 98.605 Near-IR1 0.500 125.583 Near-IR2 0.529 111.681 WV-ACRI 0.529 111.568 WV-RESWI 0.485 133.042
  • 42.
  • 43.
  • 44.
  • 45. C. elastica – green C. odorata – blue C. alliodora – red P. macroloba – yellow P. sp. A – teal S. microstachyum – magenta
  • 46. Bands/Index Used: Dependent on Rule-set for each Species Overall Accuracy = 85.37%, Kappa = 0.808 Field Reference Classification C. elastica C. odorata C. alliodora P. macroloba P. sp. A S. micro. Total Users Acc. C. elastica 2 2 100% C. odorata 3 1 4 75.00% C. alliodora 1 11 12 91.67% P. macroloba 13 13 100% P. sp. A 1 5 6 83.33% S. micro. 1 1 100% Unknown 1 1 1 3 Total 3 3 12 15 7 1 41 Prod. Acc. 66.67% 100% 91.67% 86.67% 71.43% 100% 85.37%
  • 47. Future Research • Biomass calculations • Longitudinal studies (before/after) • Forest inventory • Forest diversity (clear cut) • Forest Health (pine beetle pic) • Archaeological findings/infrastructure (china) • Bi-directional reflectance improvements