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Cellular Respiration
            Stage 2 & 3:
              Oxidation of Pyruvate
              Krebs Cycle



AP Biology                            2006-2007
Glycolysis is only the start
      Glycolysis
              glucose → → → → → pyruvate
                  6C                         2x 3C
      Pyruvate has more energy to yield
            3 more C to strip off (to oxidize)
            if O2 is available, pyruvate enters mitochondria
            enzymes of Krebs cycle complete the full
             oxidation of sugar to CO2

              pyruvate → → → → → → CO2
                  3C                             1C
AP Biology
Cellular respiration




AP Biology
Mitochondria — Structure
   Double membrane energy harvesting organelle
          smooth outer membrane
          highly folded inner membrane
             cristae
          intermembrane space
             fluid-filled space between membranes
          matrix
             inner fluid-filled space
          DNA, ribosomes
          enzymes                           intermembrane
                                                                          outer
                                                                   inner  membrane
             free in matrix &   membrane-bound space              membrane
                                                       cristae
                                                              matrix




 What cells would have
APlot of mitochondria?
 a Biology                                                                mitochondrial
                                                                          DNA
Oooooh!
                                            Form fits
   Mitochondria – Function                   function!

Dividing mitochondria       Membrane-bound proteins
Who else divides like that? Enzymes & permeases
bacteria!




What does this tell us about   Advantage of highly folded inner
the evolution of eukaryotes?   membrane?
                               More surface area for membrane-
Endosymbiosis!
 AP Biology                    bound enzymes & permeases
Oxidation of pyruvate
    Pyruvate enters mitochondrial matrix


       [
    2x pyruvate → → → acetyl CoA + CO2
         3C
                    NAD
                          2C       1C                ]
                                                 Where
          3 step oxidation process             does the
                                                CO2 go?
          releases 2 CO (count the carbons!)    Exhale!
                         2

          reduces 2 NAD → 2 NADH (moves e-)
          produces 2 acetyl CoA

     Acetyl CoA enters Krebs cycle
AP Biology
Pyruvate oxidized to Acetyl CoA


                    NAD+          reduction




                           Coenzyme A   Acetyl CoA
        Pyruvate    CO2
                                              C-C
         C-C-C        oxidation



             [
      2 x Yield = 2C sugar + NADH + CO2
AP Biology
                                              ]
1937 | 1953
   Krebs cycle
      aka Citric Acid Cycle
          in mitochondrial matrix
          8 step pathway
                                                    Hans Krebs
              each catalyzed by specific enzyme     1900-1981
              step-wise catabolism of 6C citrate molecule
      Evolved later than glycolysis
            does that make evolutionary sense?
              bacteria →3.5 billion years ago (glycolysis)
              free O2 →2.7 billion years ago (photosynthesis)
              eukaryotes →1.5 billion years ago (aerobic
AP Biology    respiration = organelles → mitochondria)
Count the carbons!
             pyruvate                  acetyl CoA
                        3C        2C
                                             citrate
                             4C         6C


                   4C         oxidation          6C
This happens
twice for each                of sugars
                                                             CO2
glucose
molecule                          x2
                   4C                             5C


                             4C         4C             CO2
AP Biology
Count the electron carriers!                           CO2
             pyruvate                  acetyl CoA
                        3C        2C
                                                         NADH
                                             citrate
             NADH            4C         6C


                     4C       reduction          6C
This happens                  of electron
twice for each                                                CO2
                               carriers
glucose
                                                              NADH
molecule
                     4C           x2              5C

             FADH2                                       CO2
                             4C ATP     4C
AP Biology
                                                       NADH
Whassup?
    So we fully
    oxidized
    glucose
      C6H12O6
              ↓
             CO2
    & ended up
    with 4 ATP!
             What’s the
              point?
AP Biology
Electron Carriers = Hydrogen Carriers    H+
                                                 H+ H+   H+

    Krebs cycle                            H+    H+ H H+
                                                       +




      produces large
      quantities of
      electron carriers             ADP
                                    + Pi
        NADH                         ATP
                                                      H+

        FADH
              2
            go to Electron
             Transport Chain!
                   What’s so
                important about
               electron carriers?
AP Biology
Energy accounting of Krebs cycle


             4 NAD + 1 FAD   4 NADH + 1 FADH2

2x pyruvate → → → → → → → → → CO2
              3C                      3x 1C
                     1 ADP   1 ATP
                               ATP

     Net gain = 2 ATP
              = 8 NADH + 2 FADH2
AP Biology
Value of Krebs cycle?
      If the yield is only 2 ATP then how was the
        Krebs cycle an adaptation?
            value of NADH & FADH2
              electron carriers & H carriers
                   reduced molecules move electrons
                   reduced molecules move H+ ions
              to be used in the Electron Transport Chain


                                          like $$
                                          in the
                                            bank




AP Biology
What’s the
                    point?


                        The point
                       is to make
                          ATP!

             ATP
AP Biology                          2006-2007
H+
                                         H+        H+         H+
  And how do we do that?            H+              H+
                                              H+              H+

 ATP synthase
   set up a H+ gradient
   allow H+ to flow

    through ATP synthase
   powers bonding

    of Pi to ADP
                          ADP + P

   ADP + Pi → ATP             ATP
                                                         H+


But… Have we done that yet?
AP Biology
NO!
             The final chapter
              to my story is
                   next!
              Any Questions?




AP Biology                  2006-2007

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Cellular Respiration Stages 2 and 3: Oxidation of Pyruvate and the Krebs Cycle

  • 1. Cellular Respiration Stage 2 & 3: Oxidation of Pyruvate Krebs Cycle AP Biology 2006-2007
  • 2. Glycolysis is only the start  Glycolysis glucose → → → → → pyruvate 6C 2x 3C  Pyruvate has more energy to yield  3 more C to strip off (to oxidize)  if O2 is available, pyruvate enters mitochondria  enzymes of Krebs cycle complete the full oxidation of sugar to CO2 pyruvate → → → → → → CO2 3C 1C AP Biology
  • 4. Mitochondria — Structure  Double membrane energy harvesting organelle  smooth outer membrane  highly folded inner membrane  cristae  intermembrane space  fluid-filled space between membranes  matrix  inner fluid-filled space  DNA, ribosomes  enzymes intermembrane outer inner membrane  free in matrix & membrane-bound space membrane cristae matrix What cells would have APlot of mitochondria? a Biology mitochondrial DNA
  • 5. Oooooh! Form fits Mitochondria – Function function! Dividing mitochondria Membrane-bound proteins Who else divides like that? Enzymes & permeases bacteria! What does this tell us about Advantage of highly folded inner the evolution of eukaryotes? membrane? More surface area for membrane- Endosymbiosis! AP Biology bound enzymes & permeases
  • 6. Oxidation of pyruvate  Pyruvate enters mitochondrial matrix [ 2x pyruvate → → → acetyl CoA + CO2 3C NAD 2C 1C ] Where  3 step oxidation process does the CO2 go?  releases 2 CO (count the carbons!) Exhale! 2  reduces 2 NAD → 2 NADH (moves e-)  produces 2 acetyl CoA  Acetyl CoA enters Krebs cycle AP Biology
  • 7. Pyruvate oxidized to Acetyl CoA NAD+ reduction Coenzyme A Acetyl CoA Pyruvate CO2 C-C C-C-C oxidation [ 2 x Yield = 2C sugar + NADH + CO2 AP Biology ]
  • 8. 1937 | 1953 Krebs cycle  aka Citric Acid Cycle  in mitochondrial matrix  8 step pathway Hans Krebs  each catalyzed by specific enzyme 1900-1981  step-wise catabolism of 6C citrate molecule  Evolved later than glycolysis  does that make evolutionary sense?  bacteria →3.5 billion years ago (glycolysis)  free O2 →2.7 billion years ago (photosynthesis)  eukaryotes →1.5 billion years ago (aerobic AP Biology respiration = organelles → mitochondria)
  • 9. Count the carbons! pyruvate acetyl CoA 3C 2C citrate 4C 6C 4C oxidation 6C This happens twice for each of sugars CO2 glucose molecule x2 4C 5C 4C 4C CO2 AP Biology
  • 10. Count the electron carriers! CO2 pyruvate acetyl CoA 3C 2C NADH citrate NADH 4C 6C 4C reduction 6C This happens of electron twice for each CO2 carriers glucose NADH molecule 4C x2 5C FADH2 CO2 4C ATP 4C AP Biology NADH
  • 11. Whassup? So we fully oxidized glucose C6H12O6 ↓ CO2 & ended up with 4 ATP! What’s the point? AP Biology
  • 12. Electron Carriers = Hydrogen Carriers H+ H+ H+ H+  Krebs cycle H+ H+ H H+ + produces large quantities of electron carriers ADP + Pi  NADH ATP H+  FADH 2  go to Electron Transport Chain! What’s so important about electron carriers? AP Biology
  • 13. Energy accounting of Krebs cycle 4 NAD + 1 FAD 4 NADH + 1 FADH2 2x pyruvate → → → → → → → → → CO2 3C 3x 1C 1 ADP 1 ATP ATP Net gain = 2 ATP = 8 NADH + 2 FADH2 AP Biology
  • 14. Value of Krebs cycle?  If the yield is only 2 ATP then how was the Krebs cycle an adaptation?  value of NADH & FADH2  electron carriers & H carriers  reduced molecules move electrons  reduced molecules move H+ ions  to be used in the Electron Transport Chain like $$ in the bank AP Biology
  • 15. What’s the point? The point is to make ATP! ATP AP Biology 2006-2007
  • 16. H+ H+ H+ H+ And how do we do that? H+ H+ H+ H+  ATP synthase  set up a H+ gradient  allow H+ to flow through ATP synthase  powers bonding of Pi to ADP ADP + P ADP + Pi → ATP ATP H+ But… Have we done that yet? AP Biology
  • 17. NO! The final chapter to my story is next! Any Questions? AP Biology 2006-2007

Editor's Notes

  1. Can’t stop at pyruvate == not enough energy produced Pyruvate still has a lot of energy in it that has not been captured. It still has 3 carbons! There is still energy stored in those bonds.
  2. Almost all eukaryotic cells have mitochondria there may be 1 very large mitochondrion or 100s to 1000s of individual mitochondria number of mitochondria is correlated with aerobic metabolic activity more activity = more energy needed = more mitochondria What cells would have a lot of mitochondria? Active cells: • muscle cells • nerve cells
  3. CO 2 is fully oxidized carbon == can’t get any more energy out it CH 4 is a fully reduced carbon == good fuel!!!
  4. Release CO 2 because completely oxidized…already released all energy it can release … no longer valuable to cell…. Because what’s the point? The Point is to make ATP!!!
  5. The enzymes of glycolysis are very similar among all organisms. The genes that code for them are highly conserved. They are a good measure for evolutionary studies. Compare eukaryotes, bacteria & archaea using glycolysis enzymes. Bacteria = 3.5 billion years ago glycolysis in cytosol = doesn’t require a membrane-bound organelle O 2 = 2.7 billion years ago photosynthetic bacteria / proto-blue-green algae Eukaryotes = 1.5 billion years ago membrane-bound organelles! Processes that all life/organisms share: Protein synthesis Glycolysis DNA replication
  6. A 2 carbon sugar went into the Krebs cycle and was taken apart completely. Two CO2 molecules were produced from that 2 carbon sugar. Glucose has now been fully oxidized! But where’s all the ATP???
  7. Everytime the carbons are oxidized, an NAD+ is being reduced. But wait…where’s all the ATP??