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Bioanalytical Method Validation
Guidelines
Nishant Patel
CDER
Draft Guidance
04/26/15
1
USFDA
04/26/15
2
Office of Medical Products and Tobacco
04/26/15
3
INTRODUCTION
• This guidance provides general recommendations for
bioanalytical method validation
Fundamental parameters :
• Accuracy
• Precision
• Selectivity
• Sensitivity
• Reproducibility
• Stability
04/26/15
4
04/26/15
5
CHROMATOGRAPHIC METHODS
04/26/15
6
• CC and QCs spiked
• Authentic standards used
• 3 types:
1.Certified
2.Commercially-supplied
3.Other
Reference Standards
04/26/15
7
Method Development
• A specific, detailed, written description of the
bioanalytical method should be established
1.Protocol
2.Study Plan
3.SOP
And Method Validation
04/26/15
8
Ability of an analytical method to differentiate and
quantify the analyte in the presence of other components
in the sample
• Plasma Screening
• Interference testing at LLOQ
• In case of more than one analyte, all of them should be
tested for interference
SELECTIVITY
04/26/15
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Closeness of mean test results obtained by the method to
the actual value (concentration) of the analyte
• replicate analysis of samples containing known amounts of
the analyte (i.e., QCs)
• measured using a minimum of five determinations per
concentration
• Acceptance criteria:
1.The mean value should be within 15% of the nominal value
except at LLOQ, where it should not deviate by more than
20%
ACCURACY
04/26/15
10
Closeness of individual measures of an analyte when the
procedure is applied repeatedly to multiple aliquots of a
single homogeneous volume of biological matrix
• Minimum of five determinations per concentration
PRECISION
• Acceptance criteria:
1.The precision determined at each concentration level
should not exceed 15% of the coefficient of variation (CV)
except for the LLOQ, where it should not exceed 20% of
the CV
04/26/15
11
1. Within-run precision (intra-batch precision or within-
run repeatability) is an assessment of precision during a
single analytical run
2. Between-run precision (inter-batch precision or
between-run repeatability) is an assessment of precision
over time and may involve different analysts,
equipment, reagents, and laboratories
3. Sample concentrations above the upper limit of the
standard curve should be diluted
04/26/15
12
• Detector response obtained from an amount of the
analyte added to and extracted from the biological
matrix, compared to the detector response obtained for
the true concentration of the analyte in solvent
• Extraction efficiency of an analytical method within the
limits of variability
RECOVERY
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• Extent of recovery of an analyte and of the internal
standard should be consistent, precise, and reproducible
• Recovery experiments should be performed by
comparing the analytical results for extracted samples at
three concentrations (low, medium, and high) with
unextracted standards that represent 100% recovery
04/26/15
14
SENSITIVITY
• The lowest analyte concentration that can be measured
with acceptable accuracy and precision (i.e., LLOQ)
04/26/15
15
REPRODUCIBILITY
• Assessed by replicate measurements using the assay,
including QCs and possibly incurred samples
• Reinjection reproducibility should be evaluated to
determine if an analytical run could be reanalyzed in the
case of instrument interruptions
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16
STABILITY
• The chemical stability of an analyte in a given matrix
under specific conditions for given time intervals is
assessed in several ways
• Pre-study stability evaluations should cover the expected
sample handling and storage conditions during the
conduct of the study, including conditions at the clinical
site, during shipment and at all other secondary sites
04/26/15
17
• The procedure should also include an evaluation of
analyte stability in stock solution
• Stock solutions of the analyte for stability evaluation
should be prepared in an appropriate solvent at known
concentrations. Stability samples should be compared to
freshly made calibrators and/or freshly made QCs
• At least three replicates at each of the low and high
concentrations should be assessed
• Stability sample results should be within 15% of nominal
concentrations
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04/26/15
19
Freeze and Thaw Stability
•During freeze/thaw stability evaluations, the freezing and
thawing of stability samples should mimic the intended
sample handling conditions to be used during sample
analysis
•Stability should be assessed for a minimum of three
freeze-thaw cycles
04/26/15
20
Bench-Top Stability
•Bench top stability experiments should be designed and
conducted to cover the laboratory handling conditions that
are expected for study samples
04/26/15
21
Long Term Stability
•The storage time in a long-term stability evaluation
should equal or exceed the time between the date of first
sample collection and the date of last sample analysis
04/26/15
22
Stock Solution Stability
•The stability of stock solutions of drug and internal
standard should be evaluated
•When the stock solution exists in a different state
(solution vs. solid) or in a different buffer composition
(generally the case for macromolecules) from the certified
reference standard, the stability data on this stock solution
should be generated to justify the duration of stock
solution storage stability
04/26/15
23
Processed Sample Stability
•The stability of processed samples, including the resident
time in the autosampler, should be determined
04/26/15
24
CALIBRATION CURVE
• A calibration (standard) curve is the relationship
between instrument response and known concentrations
of the analyte
• The relationship between response and concentration
should be continuous and reproducible
04/26/15
25
• A calibration curve should consist of a blank sample, a
zero sample and at least six non-zero samples covering
the expected range, including LLOQ
• Method validation experiments should include a
minimum of six runs conducted over several days, with
at least four concentrations (including LLOQ, low,
medium, and high) analyzed in duplicate in each run
04/26/15
26
Lower Limit of Quantification (LLOQ)
The lowest standard on the calibration curve should be
accepted as the LLOQ if the following conditions are met:
•The analyte response at the LLOQ should be at least five
times the response compared to blank response
•Analyte peak (response) should be identifiable, discrete,
and reproducible, and the back-calculated concentration
should have precision that does not exceed 20% of the CV
and accuracy within 20% of the nominal concentration
04/26/15
27
•The LLOQ should not be confused with the limit of
detection (LOD) and/or the low QC sample
•The LLOQ should be established using at least five
samples and determining the CV and/or appropriate
confidence interval should be determined
04/26/15
28
Upper Limit of Quantification (ULOQ)
The highest standard will define the ULOQ of an analytical
method
•Analyte peak (response) should be reproducible and the
back-calculated concentration should have precision that
does not exceed 15% of the CV and accuracy within 15% of
the nominal concentration
04/26/15
29
Calibration Curve/Concentration-Response:
•Selection of weighting and use of a complex regression
equation should be justified. Standards/calibrators should
not deviate by more than 15% of nominal concentrations,
except at LLOQ where the standard/calibrator should not
deviate by more than 20%
•The acceptance criterion for the standard curve is that at
least 75% of non-zero standards should meet the above
criteria, including the LLOQ. Excluding an individual
standard should not change the model used.
04/26/15
30
Quality Control Samples (QCs)
•At least 3 concentrations of QCs in duplicate should be
incorporated into each run as follows: one within three
times the LLOQ (low QC), one in the midrange (middle
QC) and one approaching the high end (high QC) of the
range of the expected study concentrations
•The minimum number of QCs should be at least 5% of the
number of unknown samples or six total QCs whichever is
greater
04/26/15
31
• It is recommended that calibration standards and QCs be
prepared from separate stock solutions. A single source
of blank matrix may also be used, provided absence of
matrix effects on extraction recovery and detection has
been verified
• Acceptance Criteria:
1.At least 67% (e.g., at least 4 out of 6) of the QCs
concentration results should be within 15% of their
respective nominal (theoretical) values.
2.At least 50% of QCs at each level should be within 15% of
their nominal concentrations
04/26/15
32
VALIDATED METHOD: USE, DATA
ANALYSIS AND REPORTING
• System suitability: If system suitability is assessed, a
specific SOP should be used
• Calibration curves and QCs should be included in all
analytical runs
• The QCs should be used to accept or reject the run
• If the study sample concentrations are clustered in a
narrow range of the standard curve, additional QCs
should be added to cover the sample range should be
used to accept or reject the run
04/26/15
33
• All study samples from a subject should be analyzed in a
single run
• Carryover should be assessed and monitored during
analysis
• Incurred sample reanalysis (ISR) should be performed
• Repeat Analysis: It is important to establish an SOP or
guideline for repeat analysis and acceptance criteria
• Sample Data Reintegration: An SOP or guideline for
sample data reintegration should be established a priori
04/26/15
34
INCURRED SAMPLE REANALYSIS
• To verify the reliability of the reported subject sample
analyte concentrations
• Conducted by repeating the analysis of a subset of
subject samples from a given study in separate runs on
different days to critically support the precision and
accuracy measurements established with spiked QCs; the
original and repeat analysis is conducted using the same
bioanalytical method procedures
04/26/15
35
• SOPs should be established and followed to address:
1.The total number of ISR samples should be 7% of the
study sample size
2.In selecting samples for reanalysis, the PK profile should
be provided and must include assessments around Cmax
and in the elimination phase for all study subjects
3.Two-thirds (67%) of the repeated sample results should be
within 20% for small molecules and 30% for large
molecules
% Difference= (Repeat – Original)/Mean * 100
04/26/15
36
DOCUMENTATION
• General and specific SOPs and good record keeping are
essential to a properly validated analytical method
• Documentation for submission to FDA should include
the following:
1.Method development and validation data and reports
2.Bioanalytical reports of the application of any methods
to study sample analysis
3.Overall summary information including limitations to
use
04/26/15
37
• Relevant documentation includes, but is not limited to,
source data; protocols and reports; records supporting
procedural, operational, and environmental concerns;
and correspondence records between the involved
parties
• Electronic audit trails should be available for all
chromatography acquisition and data processing
software and other means of electronic data capture
04/26/15
38
• System suitability is routinely assessed before an
analytical run. Data generated from system suitability
checks should be maintained in a specific file on-site and
should be available for inspection
System Suitability/Equilibration
04/26/15
39
• Summary of assay methods used for each study protocol
that should provide the protocol number, protocol title,
assay type, assay method identification code,
bioanalytical report code and effective date of the
method
• For each analyte, a summary table of all the relevant
method validation reports should be provided including
partial validation and cross-validation reports
Summary Information
04/26/15
40
• An operational description of the analytical method used
in the study.
• Detailed description of the assay procedure
• A description of the preparation of the calibration
standards and QCs including blank matrix, anticoagulant
if applicable, dates of preparation, and storage
conditions
• Evidence of purity and identity of drug, metabolites, and
IS used
Method Validation
04/26/15
41
• A description of experiments conducted to determine
accuracy, precision, recovery, selectivity, stability, limits
of quantification, calibration curve and a summary of the
results
• Tabulated data including, but not limited to, the
following:
All validation experiments with analysis dates, whether
the experiments passed or failed and the reason for the
failure
Results of calibration standards from all validation
experiments, including calibration range, response
function, back-calculated concentrations, accuracy and
precision
04/26/15
42
QC results from all validation experiments (within- and
between-run precision and accuracy)
Data from all stability experiments, i.e., storage
temperatures, duration of storage, dates of analysis, and
dates of preparation of QCs and calibration standards
used in the stability experiments
Data on selectivity, LLOQ, carry-over, extraction
recovery, matrix effect if applicable, dilution integrity,
anticoagulant effect if applicable
04/26/15
43
Bioanalytical Report
• Evidence of purity and identity of drug, metabolites and
IS used
• Step-by-step description of procedures for preparation of
QCs and calibrators
• Sample identification, collection dates, storage prior to
shipment, information on shipment batch, and storage
prior to analysis. Information should include dates,
times and sample condition
04/26/15
44
• Any deviations from the validated method, significant
equipment and material changes, SOPs, protocols and
justifications for deviations
• Complete serial chromatograms from 5-20% of subjects,
with standards and QCs from those analytical runs
• Reasons for missing samples
04/26/15
45
• Repeat analyses should be documented with the reason
• Data from reintegrated chromatograms should be
documented with the reason for reintegration (should be
performed only under a predefined SOP )
• Summary of intra- and inter-assay values of QCs and
calibration curve standards used for accepting the
analytical run
• A table listing all of the accepted and rejected analytical
runs of clinical or nonclinical samples
04/26/15
46
04/26/15
47

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Bioanalytical Method Validation Guidelines

  • 1. Bioanalytical Method Validation Guidelines Nishant Patel CDER Draft Guidance 04/26/15 1
  • 3. Office of Medical Products and Tobacco 04/26/15 3
  • 4. INTRODUCTION • This guidance provides general recommendations for bioanalytical method validation Fundamental parameters : • Accuracy • Precision • Selectivity • Sensitivity • Reproducibility • Stability 04/26/15 4
  • 7. • CC and QCs spiked • Authentic standards used • 3 types: 1.Certified 2.Commercially-supplied 3.Other Reference Standards 04/26/15 7
  • 8. Method Development • A specific, detailed, written description of the bioanalytical method should be established 1.Protocol 2.Study Plan 3.SOP And Method Validation 04/26/15 8
  • 9. Ability of an analytical method to differentiate and quantify the analyte in the presence of other components in the sample • Plasma Screening • Interference testing at LLOQ • In case of more than one analyte, all of them should be tested for interference SELECTIVITY 04/26/15 9
  • 10. Closeness of mean test results obtained by the method to the actual value (concentration) of the analyte • replicate analysis of samples containing known amounts of the analyte (i.e., QCs) • measured using a minimum of five determinations per concentration • Acceptance criteria: 1.The mean value should be within 15% of the nominal value except at LLOQ, where it should not deviate by more than 20% ACCURACY 04/26/15 10
  • 11. Closeness of individual measures of an analyte when the procedure is applied repeatedly to multiple aliquots of a single homogeneous volume of biological matrix • Minimum of five determinations per concentration PRECISION • Acceptance criteria: 1.The precision determined at each concentration level should not exceed 15% of the coefficient of variation (CV) except for the LLOQ, where it should not exceed 20% of the CV 04/26/15 11
  • 12. 1. Within-run precision (intra-batch precision or within- run repeatability) is an assessment of precision during a single analytical run 2. Between-run precision (inter-batch precision or between-run repeatability) is an assessment of precision over time and may involve different analysts, equipment, reagents, and laboratories 3. Sample concentrations above the upper limit of the standard curve should be diluted 04/26/15 12
  • 13. • Detector response obtained from an amount of the analyte added to and extracted from the biological matrix, compared to the detector response obtained for the true concentration of the analyte in solvent • Extraction efficiency of an analytical method within the limits of variability RECOVERY 04/26/15 13
  • 14. • Extent of recovery of an analyte and of the internal standard should be consistent, precise, and reproducible • Recovery experiments should be performed by comparing the analytical results for extracted samples at three concentrations (low, medium, and high) with unextracted standards that represent 100% recovery 04/26/15 14
  • 15. SENSITIVITY • The lowest analyte concentration that can be measured with acceptable accuracy and precision (i.e., LLOQ) 04/26/15 15
  • 16. REPRODUCIBILITY • Assessed by replicate measurements using the assay, including QCs and possibly incurred samples • Reinjection reproducibility should be evaluated to determine if an analytical run could be reanalyzed in the case of instrument interruptions 04/26/15 16
  • 17. STABILITY • The chemical stability of an analyte in a given matrix under specific conditions for given time intervals is assessed in several ways • Pre-study stability evaluations should cover the expected sample handling and storage conditions during the conduct of the study, including conditions at the clinical site, during shipment and at all other secondary sites 04/26/15 17
  • 18. • The procedure should also include an evaluation of analyte stability in stock solution • Stock solutions of the analyte for stability evaluation should be prepared in an appropriate solvent at known concentrations. Stability samples should be compared to freshly made calibrators and/or freshly made QCs • At least three replicates at each of the low and high concentrations should be assessed • Stability sample results should be within 15% of nominal concentrations 04/26/15 18
  • 20. Freeze and Thaw Stability •During freeze/thaw stability evaluations, the freezing and thawing of stability samples should mimic the intended sample handling conditions to be used during sample analysis •Stability should be assessed for a minimum of three freeze-thaw cycles 04/26/15 20
  • 21. Bench-Top Stability •Bench top stability experiments should be designed and conducted to cover the laboratory handling conditions that are expected for study samples 04/26/15 21
  • 22. Long Term Stability •The storage time in a long-term stability evaluation should equal or exceed the time between the date of first sample collection and the date of last sample analysis 04/26/15 22
  • 23. Stock Solution Stability •The stability of stock solutions of drug and internal standard should be evaluated •When the stock solution exists in a different state (solution vs. solid) or in a different buffer composition (generally the case for macromolecules) from the certified reference standard, the stability data on this stock solution should be generated to justify the duration of stock solution storage stability 04/26/15 23
  • 24. Processed Sample Stability •The stability of processed samples, including the resident time in the autosampler, should be determined 04/26/15 24
  • 25. CALIBRATION CURVE • A calibration (standard) curve is the relationship between instrument response and known concentrations of the analyte • The relationship between response and concentration should be continuous and reproducible 04/26/15 25
  • 26. • A calibration curve should consist of a blank sample, a zero sample and at least six non-zero samples covering the expected range, including LLOQ • Method validation experiments should include a minimum of six runs conducted over several days, with at least four concentrations (including LLOQ, low, medium, and high) analyzed in duplicate in each run 04/26/15 26
  • 27. Lower Limit of Quantification (LLOQ) The lowest standard on the calibration curve should be accepted as the LLOQ if the following conditions are met: •The analyte response at the LLOQ should be at least five times the response compared to blank response •Analyte peak (response) should be identifiable, discrete, and reproducible, and the back-calculated concentration should have precision that does not exceed 20% of the CV and accuracy within 20% of the nominal concentration 04/26/15 27
  • 28. •The LLOQ should not be confused with the limit of detection (LOD) and/or the low QC sample •The LLOQ should be established using at least five samples and determining the CV and/or appropriate confidence interval should be determined 04/26/15 28
  • 29. Upper Limit of Quantification (ULOQ) The highest standard will define the ULOQ of an analytical method •Analyte peak (response) should be reproducible and the back-calculated concentration should have precision that does not exceed 15% of the CV and accuracy within 15% of the nominal concentration 04/26/15 29
  • 30. Calibration Curve/Concentration-Response: •Selection of weighting and use of a complex regression equation should be justified. Standards/calibrators should not deviate by more than 15% of nominal concentrations, except at LLOQ where the standard/calibrator should not deviate by more than 20% •The acceptance criterion for the standard curve is that at least 75% of non-zero standards should meet the above criteria, including the LLOQ. Excluding an individual standard should not change the model used. 04/26/15 30
  • 31. Quality Control Samples (QCs) •At least 3 concentrations of QCs in duplicate should be incorporated into each run as follows: one within three times the LLOQ (low QC), one in the midrange (middle QC) and one approaching the high end (high QC) of the range of the expected study concentrations •The minimum number of QCs should be at least 5% of the number of unknown samples or six total QCs whichever is greater 04/26/15 31
  • 32. • It is recommended that calibration standards and QCs be prepared from separate stock solutions. A single source of blank matrix may also be used, provided absence of matrix effects on extraction recovery and detection has been verified • Acceptance Criteria: 1.At least 67% (e.g., at least 4 out of 6) of the QCs concentration results should be within 15% of their respective nominal (theoretical) values. 2.At least 50% of QCs at each level should be within 15% of their nominal concentrations 04/26/15 32
  • 33. VALIDATED METHOD: USE, DATA ANALYSIS AND REPORTING • System suitability: If system suitability is assessed, a specific SOP should be used • Calibration curves and QCs should be included in all analytical runs • The QCs should be used to accept or reject the run • If the study sample concentrations are clustered in a narrow range of the standard curve, additional QCs should be added to cover the sample range should be used to accept or reject the run 04/26/15 33
  • 34. • All study samples from a subject should be analyzed in a single run • Carryover should be assessed and monitored during analysis • Incurred sample reanalysis (ISR) should be performed • Repeat Analysis: It is important to establish an SOP or guideline for repeat analysis and acceptance criteria • Sample Data Reintegration: An SOP or guideline for sample data reintegration should be established a priori 04/26/15 34
  • 35. INCURRED SAMPLE REANALYSIS • To verify the reliability of the reported subject sample analyte concentrations • Conducted by repeating the analysis of a subset of subject samples from a given study in separate runs on different days to critically support the precision and accuracy measurements established with spiked QCs; the original and repeat analysis is conducted using the same bioanalytical method procedures 04/26/15 35
  • 36. • SOPs should be established and followed to address: 1.The total number of ISR samples should be 7% of the study sample size 2.In selecting samples for reanalysis, the PK profile should be provided and must include assessments around Cmax and in the elimination phase for all study subjects 3.Two-thirds (67%) of the repeated sample results should be within 20% for small molecules and 30% for large molecules % Difference= (Repeat – Original)/Mean * 100 04/26/15 36
  • 37. DOCUMENTATION • General and specific SOPs and good record keeping are essential to a properly validated analytical method • Documentation for submission to FDA should include the following: 1.Method development and validation data and reports 2.Bioanalytical reports of the application of any methods to study sample analysis 3.Overall summary information including limitations to use 04/26/15 37
  • 38. • Relevant documentation includes, but is not limited to, source data; protocols and reports; records supporting procedural, operational, and environmental concerns; and correspondence records between the involved parties • Electronic audit trails should be available for all chromatography acquisition and data processing software and other means of electronic data capture 04/26/15 38
  • 39. • System suitability is routinely assessed before an analytical run. Data generated from system suitability checks should be maintained in a specific file on-site and should be available for inspection System Suitability/Equilibration 04/26/15 39
  • 40. • Summary of assay methods used for each study protocol that should provide the protocol number, protocol title, assay type, assay method identification code, bioanalytical report code and effective date of the method • For each analyte, a summary table of all the relevant method validation reports should be provided including partial validation and cross-validation reports Summary Information 04/26/15 40
  • 41. • An operational description of the analytical method used in the study. • Detailed description of the assay procedure • A description of the preparation of the calibration standards and QCs including blank matrix, anticoagulant if applicable, dates of preparation, and storage conditions • Evidence of purity and identity of drug, metabolites, and IS used Method Validation 04/26/15 41
  • 42. • A description of experiments conducted to determine accuracy, precision, recovery, selectivity, stability, limits of quantification, calibration curve and a summary of the results • Tabulated data including, but not limited to, the following: All validation experiments with analysis dates, whether the experiments passed or failed and the reason for the failure Results of calibration standards from all validation experiments, including calibration range, response function, back-calculated concentrations, accuracy and precision 04/26/15 42
  • 43. QC results from all validation experiments (within- and between-run precision and accuracy) Data from all stability experiments, i.e., storage temperatures, duration of storage, dates of analysis, and dates of preparation of QCs and calibration standards used in the stability experiments Data on selectivity, LLOQ, carry-over, extraction recovery, matrix effect if applicable, dilution integrity, anticoagulant effect if applicable 04/26/15 43
  • 44. Bioanalytical Report • Evidence of purity and identity of drug, metabolites and IS used • Step-by-step description of procedures for preparation of QCs and calibrators • Sample identification, collection dates, storage prior to shipment, information on shipment batch, and storage prior to analysis. Information should include dates, times and sample condition 04/26/15 44
  • 45. • Any deviations from the validated method, significant equipment and material changes, SOPs, protocols and justifications for deviations • Complete serial chromatograms from 5-20% of subjects, with standards and QCs from those analytical runs • Reasons for missing samples 04/26/15 45
  • 46. • Repeat analyses should be documented with the reason • Data from reintegrated chromatograms should be documented with the reason for reintegration (should be performed only under a predefined SOP ) • Summary of intra- and inter-assay values of QCs and calibration curve standards used for accepting the analytical run • A table listing all of the accepted and rejected analytical runs of clinical or nonclinical samples 04/26/15 46