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AP Biology
Tour of the Cell
AP Biology
Prokaryote
bacteria cells
Prokaryote
bacteria cells
Types of cells
Eukaryote
animal cells
Eukaryote
animal cells
Eukaryote
plant cells
Eukaryote
plant cells
AP Biology
Why organelles?
 Specialized structures
 specialized functions
 cilia or flagella for locomotion
 Containers
 partition cell into compartments
 create different local environments
 separate pH, or concentration of materials
 distinct & incompatible functions
 lysosome & its digestive enzymes
 Membranes as sites for chemical reactions
 unique combinations of lipids & proteins
 embedded enzymes & reaction centers
 chloroplasts & mitochondria
mitochondria
chloroplast
Golgi
ER
AP Biology
Cells gotta live!
 What jobs do cells have to do?
 building proteins
 proteins control
every cell function
 make energy
 for daily life
 for growth
 build more cells
 growth
 reproduction
 repair
AP Biology
DNADNA
Why study protein production?
cellscells
proteinsproteins
organismorganism
Repeat after me…
DNA gets the glory, but
Proteins do all the work!
AP Biology
Building Proteins
 Organelles involved
 nucleus
 ribosomes
 endoplasmic reticulum
(ER)
 Golgi apparatus
 vesicles
nucleus ribosome ER
Golgi
apparatus
vesicles
The Protein Assembly Line
AP Biology
DNA
RNA
ribosomes
endoplasmic
reticulum
vesicle
Golgi
apparatus
vesicle
protein
on its way!
protein finished
protein
Making Proteins
TO:
TO:
TO:
TO:
nucleus
TO:
AP Biology
proteins
transport
vesicle
Golgi
apparatus
vesicle
smooth ER
rough ER
nuclear pore
nucleus
ribosome
cell
membrane protein secreted
cytoplasm
Making proteinsPutting it together…
AP Biology
Cells gotta live!
 What jobs do cells have to do?
 make proteins
 proteins control
every cell function
 make energy
 for daily life
 for growth
 build more cells
 growth
 reproduction
 repair
ATP
AP Biology
Cells need power!
 Making energy
 take in food & digest it
 take in oxygen (O2)
 make ATP
 remove waste
ATP
AP Biology
Lysosomes
 Function
 little “stomach” of the cell
 digests macromolecules
 “clean up crew” of the cell
 cleans up broken down
organelles
 Structure
 vesicles of digestive enzymes
only in animal cellsonly in animal cells
Christian de Duve
1960 | 1974
Where
old organelles
go to die!
AP Biology
Lysosomal enzymes
 Lysosomal enzymes work best at pH 5
 organelle creates custom pH
 how?
 proteins in lysosomal membrane
pump H+
ions from the cytosol
into lysosome
 why?
 enzymes are very sensitive
to pH
 why?
 enzymes are proteins —
pH affects structure
 why is this an adaptation: digestive enzymes which
function at pH different from cytosol?
 digestive enzymes won’t function well if some leak
into cytosol = don’t want to digest yourself!
AP Biology
But sometimes cells need to die…
 Lysosomes can be used to kill cells when
they are supposed to be destroyed
 some cells have to die for proper
development in an organism
 apoptosis
 “auto-destruct” process
 lysosomes break open & kill cell
 ex: tadpole tail gets re-absorbed
when it turns into a frog
 ex: loss of webbing between your
fingers during fetal development
 ex: self-destruct of cancerous cell
AP Biology
Fetal development
15
weeks
6 weeks
syndactyly
AP Biology
When things go wrong…
 Diseases of lysosomes are often fatal
 digestive enzyme not working in lysosome
 picks up biomolecules, but can’t digest one
 lysosomes fill up with undigested material
 grow larger & larger until disrupts cell &
organ function
 lysosomal storage diseases
 more than 40 known diseases
 example:
Tay-Sachs disease
build up undigested fat
in brain cells
AP Biology
From food to making Energy
 Cells must convert incoming energy to
forms that they can use for work
 mitochondria:
from glucose to ATP
 chloroplasts:
from sunlight to ATP & carbohydrates
 ATP = immediate energy
 carbohydrates = stored energy
+
ATP
ATP
AP Biology
Mitochondria & Chloroplasts
 Important to see the similarities
 transform energy
 generate ATP
 double membranes = 2 membranes
 semi-autonomous organelles
 move, change shape, divide
 internal ribosomes, DNA & enzymes
AP Biology
Membrane-bound Enzymes
glucose + oxygen → carbon + water + energy
dioxide
C6H12O6 6O2 6CO2 6H2O ATP→+ + +
AP Biology
Membrane-bound Enzymes
+ water + energy → glucose + oxygencarbon
dioxide
6CO2 6H2O C6H12O6 6O2
light
energy
→+ ++
AP Biology
Mitochondria are everywhere!!
animal cellsanimal cells plant cellsplant cells
AP Biology
Cells gotta live!
 What jobs do cells have to do?
 building proteins
 proteins control
every cell function
 make energy
 for daily life
 for growth
 build more cells
 growth
 reproduction
 repair
AP Biology
Cytoskeleton
 Function
 structural support
 maintains shape of cell
 provides anchorage for organelles
 protein fibers
 microfilaments, intermediate filaments, microtubules
 motility
 cell locomotion
 cilia, flagella, etc.
 regulation
 organizes structures
& activities of cell
AP Biology
 actin
 microtubule
 nuclei
Cytoskeleton
AP Biology
Centrioles
 Cell division
 in animal cells, pair of centrioles
organize microtubules
 guide chromosomes in mitosis
AP Biology 2007-2008
Cell Size
AP Biology
Limits to cell size
 Lower limit
 smallest bacteria
 mycoplasmas
 0.1 to 1.0 micron (µm = micrometer)
 most bacteria
 1-10 microns
 Upper limit
 eukaryotic cells
 10-100 microns
 micron = micrometer = 1/1,000,000 meter
 diameter of human hair = ~20 microns
AP Biology
What limits cell size?
 Surface to volume ratio
 as cell gets bigger its volume increases
faster than its surface area
 smaller objects have greater
ratio of surface area to volume
6:1 ~1:1 6:1s:v
Why is a huge
single-celled
creature not
possible?
AP Biology
Limits to cell size
 Metabolic requirements set upper limit
 in large cell, cannot move material in &
out of cell fast enough to support life
CHO
CHO
aa
aa
CH
CO2
NH3
aa
O2
CH
What’s the solution?
What process is this?
O2
O2
aa
CHO
aa
CH
O2
aa
CHO
CH
aa
O2
CO2
NH3
NH3
CO2
CO2
NH3
AP Biology
How to get bigger?
 Become multicellular (cell divides)
O2
CHO
CHO
aa
aa
CH
CO2
NH3
aa
O2
CH
But what challenges do you have to solve now?
aa
CO2
CO2
CO2
CO2
CO2
CO2 CO2
CO2
CO2
CO2
NH3
NH3
NH3
NH3
NH3
NH3
NH3NH3
O2
aa
CH
aa
CHO
O2
AP Biology
Phospholipid Cholesterol
Membrane
proteins
Cell membrane
 Exchange structure
 plasma membrane functions as
selective barrier
 allows passage of O2 & nutrients IN
 allows passage of products & wastes OUT

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Cells_1

  • 2. AP Biology Prokaryote bacteria cells Prokaryote bacteria cells Types of cells Eukaryote animal cells Eukaryote animal cells Eukaryote plant cells Eukaryote plant cells
  • 3. AP Biology Why organelles?  Specialized structures  specialized functions  cilia or flagella for locomotion  Containers  partition cell into compartments  create different local environments  separate pH, or concentration of materials  distinct & incompatible functions  lysosome & its digestive enzymes  Membranes as sites for chemical reactions  unique combinations of lipids & proteins  embedded enzymes & reaction centers  chloroplasts & mitochondria mitochondria chloroplast Golgi ER
  • 4. AP Biology Cells gotta live!  What jobs do cells have to do?  building proteins  proteins control every cell function  make energy  for daily life  for growth  build more cells  growth  reproduction  repair
  • 5. AP Biology DNADNA Why study protein production? cellscells proteinsproteins organismorganism Repeat after me… DNA gets the glory, but Proteins do all the work!
  • 6. AP Biology Building Proteins  Organelles involved  nucleus  ribosomes  endoplasmic reticulum (ER)  Golgi apparatus  vesicles nucleus ribosome ER Golgi apparatus vesicles The Protein Assembly Line
  • 7. AP Biology DNA RNA ribosomes endoplasmic reticulum vesicle Golgi apparatus vesicle protein on its way! protein finished protein Making Proteins TO: TO: TO: TO: nucleus TO:
  • 8. AP Biology proteins transport vesicle Golgi apparatus vesicle smooth ER rough ER nuclear pore nucleus ribosome cell membrane protein secreted cytoplasm Making proteinsPutting it together…
  • 9. AP Biology Cells gotta live!  What jobs do cells have to do?  make proteins  proteins control every cell function  make energy  for daily life  for growth  build more cells  growth  reproduction  repair ATP
  • 10. AP Biology Cells need power!  Making energy  take in food & digest it  take in oxygen (O2)  make ATP  remove waste ATP
  • 11. AP Biology Lysosomes  Function  little “stomach” of the cell  digests macromolecules  “clean up crew” of the cell  cleans up broken down organelles  Structure  vesicles of digestive enzymes only in animal cellsonly in animal cells Christian de Duve 1960 | 1974 Where old organelles go to die!
  • 12. AP Biology Lysosomal enzymes  Lysosomal enzymes work best at pH 5  organelle creates custom pH  how?  proteins in lysosomal membrane pump H+ ions from the cytosol into lysosome  why?  enzymes are very sensitive to pH  why?  enzymes are proteins — pH affects structure  why is this an adaptation: digestive enzymes which function at pH different from cytosol?  digestive enzymes won’t function well if some leak into cytosol = don’t want to digest yourself!
  • 13. AP Biology But sometimes cells need to die…  Lysosomes can be used to kill cells when they are supposed to be destroyed  some cells have to die for proper development in an organism  apoptosis  “auto-destruct” process  lysosomes break open & kill cell  ex: tadpole tail gets re-absorbed when it turns into a frog  ex: loss of webbing between your fingers during fetal development  ex: self-destruct of cancerous cell
  • 15. AP Biology When things go wrong…  Diseases of lysosomes are often fatal  digestive enzyme not working in lysosome  picks up biomolecules, but can’t digest one  lysosomes fill up with undigested material  grow larger & larger until disrupts cell & organ function  lysosomal storage diseases  more than 40 known diseases  example: Tay-Sachs disease build up undigested fat in brain cells
  • 16. AP Biology From food to making Energy  Cells must convert incoming energy to forms that they can use for work  mitochondria: from glucose to ATP  chloroplasts: from sunlight to ATP & carbohydrates  ATP = immediate energy  carbohydrates = stored energy + ATP ATP
  • 17. AP Biology Mitochondria & Chloroplasts  Important to see the similarities  transform energy  generate ATP  double membranes = 2 membranes  semi-autonomous organelles  move, change shape, divide  internal ribosomes, DNA & enzymes
  • 18. AP Biology Membrane-bound Enzymes glucose + oxygen → carbon + water + energy dioxide C6H12O6 6O2 6CO2 6H2O ATP→+ + +
  • 19. AP Biology Membrane-bound Enzymes + water + energy → glucose + oxygencarbon dioxide 6CO2 6H2O C6H12O6 6O2 light energy →+ ++
  • 20. AP Biology Mitochondria are everywhere!! animal cellsanimal cells plant cellsplant cells
  • 21. AP Biology Cells gotta live!  What jobs do cells have to do?  building proteins  proteins control every cell function  make energy  for daily life  for growth  build more cells  growth  reproduction  repair
  • 22. AP Biology Cytoskeleton  Function  structural support  maintains shape of cell  provides anchorage for organelles  protein fibers  microfilaments, intermediate filaments, microtubules  motility  cell locomotion  cilia, flagella, etc.  regulation  organizes structures & activities of cell
  • 23. AP Biology  actin  microtubule  nuclei Cytoskeleton
  • 24. AP Biology Centrioles  Cell division  in animal cells, pair of centrioles organize microtubules  guide chromosomes in mitosis
  • 26. AP Biology Limits to cell size  Lower limit  smallest bacteria  mycoplasmas  0.1 to 1.0 micron (µm = micrometer)  most bacteria  1-10 microns  Upper limit  eukaryotic cells  10-100 microns  micron = micrometer = 1/1,000,000 meter  diameter of human hair = ~20 microns
  • 27. AP Biology What limits cell size?  Surface to volume ratio  as cell gets bigger its volume increases faster than its surface area  smaller objects have greater ratio of surface area to volume 6:1 ~1:1 6:1s:v Why is a huge single-celled creature not possible?
  • 28. AP Biology Limits to cell size  Metabolic requirements set upper limit  in large cell, cannot move material in & out of cell fast enough to support life CHO CHO aa aa CH CO2 NH3 aa O2 CH What’s the solution? What process is this? O2 O2 aa CHO aa CH O2 aa CHO CH aa O2 CO2 NH3 NH3 CO2 CO2 NH3
  • 29. AP Biology How to get bigger?  Become multicellular (cell divides) O2 CHO CHO aa aa CH CO2 NH3 aa O2 CH But what challenges do you have to solve now? aa CO2 CO2 CO2 CO2 CO2 CO2 CO2 CO2 CO2 CO2 NH3 NH3 NH3 NH3 NH3 NH3 NH3NH3 O2 aa CH aa CHO O2
  • 30. AP Biology Phospholipid Cholesterol Membrane proteins Cell membrane  Exchange structure  plasma membrane functions as selective barrier  allows passage of O2 & nutrients IN  allows passage of products & wastes OUT

Editor's Notes

  1. Why organelles? There are several reasons why cells evolved organelles. First, organelles can perform specialized functions. Second, membrane bound organelles can act as containers, separating parts of the cell from other parts of the cell. Third, the membranes of organelles can act as sites for chemical reactions. Organelles as specialized structures An example of the first type of organelle is cilia, these short filaments act as "paddles" to help some cells move. Organelles as Containers Nothing ever invented by man is as complex as a living cell. At any one time hundreds of incompatible chemical reactions may be occurring in a cell. If the cell contained a uniform mixture of all the chemicals it would not be able to survive. Organelles surrounded by membranes act as individual compartments for these chemical reactions. An example of the second type of organelle is the lysosome. This structure contains digestive enzymes, these enzymes if allowed to float free in the cell would kill it. Organelle membranes as sites for chemical reactions An example of the third type of organelle is the chloroplast. The molecules that conduct the light reactions of photosynthesis are found embedded in the membranes of the chloroplast.
  2. lysosomes create a space where cell can digest macromolecules safely rupturing a few lysosomes has little impact on a cell (pH of cytosol affects functionality of the lysosomal enzymes), but massive leakage from lysosomes can destroy cell why evolve digestive enzymes which function at pH so different from cytosol? digestive enzymes won’t function well if leak into cytosol = most times don’t want to digest yourself! low pH = acid environment cause oxidation (removing electrons) & promotes hydrolysis
  3. Feedback mechanism There are sensors in the cell that monitor growth. They trigger self-destruct when they sense processes. Brown spots on leaves too. Virus infected plant cell auto-destructs and even cells around it to wall off virus.
  4. square - cube law As cell gets larger, volume increases cubically, but surface area only increases by the square. The volume of the cell is demanding… it needs exchange. The surface area is the exchange system… as cell gets larger, the surface area cannot keep up with demand. Instead of getting bigger, cell divides -- mitosis.
  5. What process is this? diffusion What’s the solution? cell divides make a multi-celled creature = lots of little cell, rather than one BIG cell
  6. Larger organisms do not generally have larger cells than smaller organisms — simply more cells What’s challenges do you have to solve now? how to bathe all cells in fluid that brings nutrients to each & removes wastes from each