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Synthetic Biology  Extreme Genetic Engineering Jim Thomas ETC Group.
Designing Lifeforms in the 21st Century… A Rough Guide to
 
1. SEX 2. SPLICING 3. SYNTHESIS
 
 
 
$ 3000  7500bp
atgcgtaaaggagaagaacttttcactggagttgtcccaattcttgttgaattagatggtgatgttaatgggcacaaattttctgtcagtggagagggtgaaggtgatgcaacatacggaaaacttacccttaaatttatttgcactactggaaaactacctgttccatggccaacacttgtcactactttcggttatggtgttcaatgctttgcgagatacccagatcatatgaaacagcatgactttttcaagagtgccatgcccgaaggttatgtacaggaaagaactatatttttcaaagatgacgggaactacaagacacgtgctgaagtcaagtttgaaggtgatacccttgttaatagaatcgagttaaaaggtattgattttaaagaagatggaaacattcttggacacaaattggaatacaactataactcacacaatgtatacatcatggcagacaaacaaaagaatggaatcaaagttaacttcaaaattagacacaacattgaagatggaagcgttcaactagcagaccattatcaacaaaatactccaattggcgatggccctgtccttttaccagacaaccattacctgtccacacaatctgccctttcgaaagatcccaacgaaaagagagaccacatggtccttcttgagtttgtaacagctgctgggattacacatggcatggatgaactatacaaataataa
 
 
 
 
Synbio Cells =  Seven Steps
Café Latte =  Twelve Steps (And costs more in equipment)
BBa_E0030 Part-only sequence (723bp) atggtgagcaagggcgaggagctgttcaccggggtggtgcccatcctggtcgagctggacggcgacgtaaacggccacaagttcagcgtgtccggcgagggcgagggcgatgccacctacggcaagctgaccctgaagttcatctgcaccaccggcaagctgcccgtgccctggcccaccctcgtgaccaccttcggctacggcctgcaatgcttcgcccgctaccccgaccacatgaagctgcacgacttcttcaagtccgccatgcccgaaggctacgtccaggagcgcaccatcttcttcaaggacgacggcaactacaagacccgcgccgaggtgaagttcgagggcgacaccctggtgaaccgcatcgagctgaagggcatcgacttcaaggaggacggcaacatcctggggcacaagctggagtacaactacaacagccacaacgtctatatcatggccgacaagcagaagaacggcatcaaggtgaacttcaagatccgccacaacatcgaggacggcagcgtgcagctcgccgaccactaccagcagaacacccccatcggcgacggccccgtgctgctgcccgacaaccactacctgagctaccagtccgccctgagcaaagaccccaacgagaagcgcgatcacatggtcctgctggagttcgtgaccgccgccgggatcactctcggcatggacgagctgtacaagtaataa
 
“ Teenagers..”
“ Biohackers…”
 
“ Start-Ups…”
STEP 1: Use philanthropic money to destroy african farm livelihoods…
STEP 2: Use the same technology to take over the biofuels industry.
“ Moguls…”
“ Over the next 20 years, synthetic genomics is going to become the standard for making anything. The chemical industry will depend on it. Hopefully, a large part of the energy industry will depend on it.”   "We have modest goals of replacing the whole petrochemical industry and becoming a major source of energy,"
“ Corporations…”
 
Why  Worry??
BIOWARFARE Reasons to worry..
 
 
 
BIOPIRACY Reasons to worry.. “ We  ought to be able to make any compound produced by a plant inside a microbe”  Jay Keasling
Lets say we want to digitally steal guarana … Reasons to worry.. STEP 1: identify the plant Paullinia cupana
Lets say we want to digitally steal guarana … Reasons to worry.. STEP 2: Find appropriate gene sequences on GENBANK
Lets say we want to digitally steal guarana … Reasons to worry.. STEP 3: Order the gene sequences from a DNA synthesis company
Lets say we want to digitally steal guarana … Reasons to worry.. STEP 4:Engineer Synthetic DNA pathways into microbe and tinker to produce Guarana extract
Reasons to worry.. NOTE!!! No Material Transfer Agreement needed (Access and Benefit Sharing) Because No MATERIAL is transferred.
“ Th e poster boy for the commercialisation of research”
” The application of modern genomics techniques to the study of communities of microbial organisms directly in their natural environments, bypassing the need for isolation and lab cultivation of individual species.”  - Kevin Chen and Lior Pachtr (UC Berkeley) Phase 1 METAGENOMICS
Massive Raw Materials Grab. Sargasso:  1.4 million new genes Halifax > Galapagos: Six million new genes
 
 
4 million genes of foreign species in mouth, intestines etc - More bacterial cells than human cells -10 percent of what is in our bloodstream is bacterial metabolites “ We are as much dependent on bacterial metabolism as human metabolism”  - Venter.
 
 
Minimal  genome. Transplantation Full genome construction + + Mycoplasma  genitalium Phase 1: An operating system
Mycoplasma laboratorium
Combinatorial Genomics - “ a new Cambrian Explosion” I  call it combinatorial genomics.. Its one of my better ideas if it works. In fact, it s  one of my better ideas if it doesn’ t  work’ - Venter
 
 
+ + =  “ Te n million genes are the design components of the future, W i th combinatorial genomics and casette-based construction, we can make  millions of genomes per day . ” - JC Venter Plug-in gene cassette system Millions of new sequences Rapid Robotic construction
[object Object],[object Object],[object Object],[object Object],[object Object]
BIOSAFETY Reasons to worry.. “ The engineers can come and rewire this and that. But biological systems are not simple... And the engineers will find out that the bacteria are just laughing at them.” - Eckard Wimmer, SUNY StonyBrook
 
“ The logical extrapolation from this experiment is to suggest that it is possible to make a genetically engineered microorganism that would kill all terrestrial plants. “ Dr Elaine Ingham. University of Oregon.
BIODEVESTATION  (via the Biomass Economy ) Reasons to worry..
 

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