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Functional Materials Based on Metal Complexes
Presenters: Bailey Bouley, Colton D’Ambra, Huy Lam, Jason Ross
Research Educator: Dr. Lauren DePue
Faculty Professors: Dr. Richard Jones, and Dr. Bradley Holliday
3D-Structure
Funding and Support
Conclusion
Publications by the Functional Materials Stream
1) Chan, C.; Yang, X.; Jones, R. A; Holliday, B. J.; Stanley, J. M. “{μ-6,6’-Dimeth-Oxy-2,2'-[butane-1,4-Diylbis(nitrilo-Methyl-Idyne)]diphenolato-1:2κO,O,O,O:O,N,N',O}tris-(nitrato-
1κO,O')copper(II)gadolinium(III)” Acta Crystallogr. Sect. E. Struct. Rep. 2010, 66, m576–7.
2) Liao, A.; Yang, X.; Stanley, J. M.; Jones, R. A.; Holliday, B. J. “Synthesis and Crystal Structure of a New Heterotrinuclear Schiff-Base Zn–Gd Complex.” J. Chem. Crystallogr. 2010, 40, 1060–1064.
3) Stanley, J. M.; Chan, C. K.; Yang, X.; Jones, R. A.; Holliday, B. J. “Synthesis, X-Ray Crystal Structure and Photophysical Properties of tris(dibenzoylmethanido)(1,10-phenanthroline)samarium(III).”
Polyhedron 2010, 29, 2511–2515.
4) Yang, X.; Chan, C.; Lam, D.; Schipper, D.; Stanley, J. M.; Chen, X.; Jones, R. A; Holliday, B. J.; Wong, W.-K.; Chen, S. “Anion-Dependent Construction of Two Hexanuclear 3d-4f Complexes with a
Flexible Schiff Base Ligand”. Dalton Trans. 2012, 41, 11449–11453.
5) Yang, X.; Lam, D.; Chan, C.; Stanley, J. M.; Jones, R. A; Holliday, B. J.; Wong, W.-K. “Construction of 1-D 4f and 3d-4f Coordination Polymers with Flexible Schiff Base Ligands.” Dalton Trans.
2011, 40, 9795–9801.
6) Yang, X.; Schipper, D.; Jones, R. A; Lytwak, L. A; Holliday, B. J.; Huang, S. “Anion-Dependent Self-Assembly of near-Infrared Luminescent 24- and 32-Metal Cd-Ln Complexes with Drum-like
Architectures.” J. Am. Chem. Soc. 2013, 135, 8468–8471.
7) Yang, X.; Schipper, D.; Liao, A.; Stanley, J. M.; Jones, R. A.; Holliday, B. J. “Anion Dependent Self-Assembly of Luminescent Zn–Ln (Eu and Tb) Salen Complexes.” Polyhedron 2013, 52, 165–169.
8) Yang, X.; Schipper, D.; Zhang, L.; Yang, K.; Huang, S.; Jiang, J.; Su, C.; Jones, R. A. “Anion dependent self-assembly of 56-metal Cd–Ln nanoclusters with enhanced near-infrared luminescence
properties.” Nanoscale. 2014, 6, 10569.
9) Jones, R. A.; Gnanam, A. J.; Arambula, J. F.; Jones, J. N.; Swaminathan, J.; Yang, X.; Schipper, D.; Hall, J. W.; DePue, L. J.; Dieye, Y.; et al. “Lanthanide nano-drums: a new class of molecular
nanoparticles for potential biomedical applications.” Faraday Discuss. 2014, 175, 241–255.
10) Brown, K. A.; Yang, X.; Schipper, D.; Hall, J. W.; DePue, L. J.; Gnanam, A. J.; Arambula, J. F.; Jones, J. N.; Swaminathan, J.; Dieye, Y.; et al. “A self-assembling lanthanide molecular nanoparticle for
optical imaging.” Dalt. Trans. 2015, 44 (6), 2667–2675.”
X-ray Crystallography
Coordination of Ligands to Lanthanides
Synthesis of Schiff Base Ligands
Introduction to our Research
The coordination of a ligand to a lanthanide begins by selecting the appropriate reagents for the desired result. Using Hard/Soft
Acid/Base Theory it is established that lanthanides bind well to ligands containing oxygen and nitrogen. Most of the lanthanide
metals luminesce at specific wavelengths in either the visible or near-infrared region. Others have different applications, such as
gadolinium whose magnetic properties allow it to act as a contrast agent during an MRI scan. Selecting the appropriate ligand
depends on the functional groups as well. Most ligands used have derivatives with an added bromine that can substitute other
functional groups. The ligand chosen also affects the crystal structure, so the ligand can be chosen based on a desired structure.
General Procedure:
1. Dissolve lanthanide salt in desired solvents.
2. Add ligand to the solution.
3. Reflux ligand for 45-60 minutes.
4. Allow solution to cool.
5. Filter solution to remove solid impurities.
6. Pipette solution into test tubes.
7. Put test tubes in a jar filled with diethyl ether.
8. Using Slow Vapor Diffusion, wait until formation of crystals.
The typical solvents used are ethanol and toluene because the complexes are soluble in ethanol, but not toluene, so this reduces the
overall solubility, promoting crystallization. The general procedure can be modified for different ligands based on what has worked
in the past. For example, letting the solution sit for a couple of days before filtering sometimes causes complexes to crystallize
directly in the round bottom flask. Additional reagents can be added to the reaction flask to attempt the formation of a multi-nuclear
coordination compound.
The jars create an environment that allows slow vapor diffusion to form crystals. The highly volatile diethyl ether slowly diffuses
into the test tubes mixing together and forming a new solution. The complexes are insoluble with diethyl ether, so they will be
supersaturated in the solution after the diethyl ether enters. If the complex can find a nucleation site in the test tube (i.e. a
microscopic scratch on the side), crystallization will begin. If there are no nucleation sites, the complex will precipitate out. The
diethyl ether enters the test tubes slowly allowing for the crystals to form in high enough quality to allow their structure to be found
via X-ray crystallography.
Figure 4. Lanthanide metals luminesce at specific wavelengths in narrow bands
primarily in the visible or NIR spectrum. The specific wavelength allows the
lanthanide metals to be found when they attach to something, creating uses in fields
such as cancer diagnosis.
Figure 7. Reaction set-up for typical synthesis.
Figure 2. Luminescent lanthanide containing
compounds under UV lamp (Sm – pink; Tb – green;
Eu – red).
Figure 3a & 3b. Growing
crystals via slow vapor
diffusion.
Ligand
Synthesis
Lanthanide
Coordination
Crystal Growth
X-ray
Crystallography
Group
Imine synthesis begins by combining the amine and aldehyde components in a round bottom flask
containing ethanol as a solvent. The solutions are refluxed on medium heat and high stir for 1-2
hours to ensure progression of the reactions. After the refluxes are complete, the solutions were
left to cool to room temperature to promote precipitation.
Figure 6. Sample vanillin derivatives used as aldehydes and sample amines used in synthesizing Schiff base ligands.
Figure 8. Synthesis of bidentate and monodentate Schiff-based ligands from vanillin
derivatives and amines.
Single crystal X-ray diffraction is a valuable tool in determining the structures of complexes synthesized in the
functional materials lab. As the name implies, a single crystal is required for analysis and must be free of cracks,
twinning, and other deformities. After initial screening under a microscope with polarized light, a single crystal may be
mounted onto a loop for diffraction.
Once the crystal is mounted and centered a beam of X-rays is directed at the center of the crystal. This initial beam is used to
determine if the crystal is of sufficient quality to continue diffraction. If the crystal is acceptable, the diffraction continues and
data is collected as the crystal is rotated on its loop. Depending on the specific machine being used, an initial crude structure is
given and the software Olex2 is then used to refine the structure in preparation for publication.
Figure 5. Crystal structure of the complex that results from the
coordination of a lanthanide metal to the Schiff base ligand composed
of o-vanillin and o-phenyldiamine. The oxygen atoms of the ligand
donate their electron pairs to make a bond coordinate bond with the
ligand.
If a significant amount of the ligand formed a solid, the solution
was filtered via vacuum filtration and the imine collected. For many
of the monodentate ligands however, they are liquids at room
temperature and had to be stored as either a molar solution in
ethanol or as a pure liquid. Some ligands that were solid at room
temperature but soluble in ethanol and were rotary evaporated to
remove the ethanol to recover the imine.
After the products were isolated, NMR samples were run to show the absence of the aldehyde and
amine peaks and the presence of the imine peaks, indicating the success of the reaction.
Figure 1. The lanthanide luminesces through the antenna effect. Light
is absorbed by the ligand and transfers energy to the lanthanide, causing
it to enter an excited state. The lanthanide then relaxes and releases
light through luminescence.
Lanthanide complexes have many applications due to their spectroscopic, magnetic and luminescent properties.
These applications include: (1) detecting tumors under a UV light and observing whether the area contains a
luminescent lanthanide; (2) multiple variations of Gd(III) chelates are used in MRI as contrasting agents; (3) and
lanthanides are prevelant in OLED television displays due to these sharp, strong lanthanide emissions. These
luminescent properties would not be possible without the use of organic ligands on lanthanide ions to provide stability
and utilize the Antennae Effect.
The organic ligands absorb UV light and transfer the energy to
lanthanide ion. Once the lanthanide ion is excited by the ligand,
it releases the energy in a narrow light emission that depends on
the lanthanide ion in the complex. The experiments conducted
used organic Schiff base salen-type ligands with lanthanide
ions, transition metal ions, or both to make interesting metal
complexes. Single crystal X-ray crystallography determines the
structure of the complexes, which can then be further studied
for other useful properties.
Figure 9. Examples of the crystal structures that results from the ligand reacted in certain conditions: (a) The pictured
ligand reacted with Nd(NO3)3 to form a neodymium compound containing two ligands bound via the oxygens; (b) The
pictured ligand reacted with Cd(OAc)2 and Nd(OAc)3 to form a barrel-shaped structure containing 12 ligands and 8
neodymium atoms.
Figure 10. X-ray quality crystals are removed from test tubes and collected in oil to prevent the solvent from drying out.
They’re then placed on a loop in preparation for X-ray diffractometry. Once the X-ray diffraction data is collected, the
structure can usually be deciphered.
Further research will consist primarily of synthesizing more ligands and metal complexes. Additional characterization of the
metal complexes will be done involving fluorimetry, IR spectroscopy, and NMR spectroscopy. Fluorimetry of the metal
complexes will determine the quantum yield. Knowledge of this helps determine if the complexes will be good candidates for
applications utilizing their luminescence.
Some of the ligands synthesized will contain a bromine functional group which will allow a number of substitutions to occur in
order to functionalize the complex. Once substituted, the metal complexes can find potential uses as contrast reagents, NMR
shift reagents, or as biomarkers. The ring structure shown in Figure 10 shows promise as a biomarker due to the high number of
lanthanide metals and lack of toxic cadmium as in the barrel structures. The high number of lanthanides increases the chances of
the lanthanide centers reaching the targeted area as well as causing the targeted area to luminesce brighter once subjected to UV
light.
Figure 11. Example of MRI taken without contrast
agent (left) and with a Gd complex as a contrast
agent (right).
Figure 12. Example of the effect of a Eu NMR shift reagent on n-pentanol. The
overlapping peaks shown in (a) are separated enough to be distinguished in (b).

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2016 URF Poster

  • 1. Functional Materials Based on Metal Complexes Presenters: Bailey Bouley, Colton D’Ambra, Huy Lam, Jason Ross Research Educator: Dr. Lauren DePue Faculty Professors: Dr. Richard Jones, and Dr. Bradley Holliday 3D-Structure Funding and Support Conclusion Publications by the Functional Materials Stream 1) Chan, C.; Yang, X.; Jones, R. A; Holliday, B. J.; Stanley, J. M. “{μ-6,6’-Dimeth-Oxy-2,2'-[butane-1,4-Diylbis(nitrilo-Methyl-Idyne)]diphenolato-1:2κO,O,O,O:O,N,N',O}tris-(nitrato- 1κO,O')copper(II)gadolinium(III)” Acta Crystallogr. Sect. E. Struct. Rep. 2010, 66, m576–7. 2) Liao, A.; Yang, X.; Stanley, J. M.; Jones, R. A.; Holliday, B. J. “Synthesis and Crystal Structure of a New Heterotrinuclear Schiff-Base Zn–Gd Complex.” J. Chem. Crystallogr. 2010, 40, 1060–1064. 3) Stanley, J. M.; Chan, C. K.; Yang, X.; Jones, R. A.; Holliday, B. J. “Synthesis, X-Ray Crystal Structure and Photophysical Properties of tris(dibenzoylmethanido)(1,10-phenanthroline)samarium(III).” Polyhedron 2010, 29, 2511–2515. 4) Yang, X.; Chan, C.; Lam, D.; Schipper, D.; Stanley, J. M.; Chen, X.; Jones, R. A; Holliday, B. J.; Wong, W.-K.; Chen, S. “Anion-Dependent Construction of Two Hexanuclear 3d-4f Complexes with a Flexible Schiff Base Ligand”. Dalton Trans. 2012, 41, 11449–11453. 5) Yang, X.; Lam, D.; Chan, C.; Stanley, J. M.; Jones, R. A; Holliday, B. J.; Wong, W.-K. “Construction of 1-D 4f and 3d-4f Coordination Polymers with Flexible Schiff Base Ligands.” Dalton Trans. 2011, 40, 9795–9801. 6) Yang, X.; Schipper, D.; Jones, R. A; Lytwak, L. A; Holliday, B. J.; Huang, S. “Anion-Dependent Self-Assembly of near-Infrared Luminescent 24- and 32-Metal Cd-Ln Complexes with Drum-like Architectures.” J. Am. Chem. Soc. 2013, 135, 8468–8471. 7) Yang, X.; Schipper, D.; Liao, A.; Stanley, J. M.; Jones, R. A.; Holliday, B. J. “Anion Dependent Self-Assembly of Luminescent Zn–Ln (Eu and Tb) Salen Complexes.” Polyhedron 2013, 52, 165–169. 8) Yang, X.; Schipper, D.; Zhang, L.; Yang, K.; Huang, S.; Jiang, J.; Su, C.; Jones, R. A. “Anion dependent self-assembly of 56-metal Cd–Ln nanoclusters with enhanced near-infrared luminescence properties.” Nanoscale. 2014, 6, 10569. 9) Jones, R. A.; Gnanam, A. J.; Arambula, J. F.; Jones, J. N.; Swaminathan, J.; Yang, X.; Schipper, D.; Hall, J. W.; DePue, L. J.; Dieye, Y.; et al. “Lanthanide nano-drums: a new class of molecular nanoparticles for potential biomedical applications.” Faraday Discuss. 2014, 175, 241–255. 10) Brown, K. A.; Yang, X.; Schipper, D.; Hall, J. W.; DePue, L. J.; Gnanam, A. J.; Arambula, J. F.; Jones, J. N.; Swaminathan, J.; Dieye, Y.; et al. “A self-assembling lanthanide molecular nanoparticle for optical imaging.” Dalt. Trans. 2015, 44 (6), 2667–2675.” X-ray Crystallography Coordination of Ligands to Lanthanides Synthesis of Schiff Base Ligands Introduction to our Research The coordination of a ligand to a lanthanide begins by selecting the appropriate reagents for the desired result. Using Hard/Soft Acid/Base Theory it is established that lanthanides bind well to ligands containing oxygen and nitrogen. Most of the lanthanide metals luminesce at specific wavelengths in either the visible or near-infrared region. Others have different applications, such as gadolinium whose magnetic properties allow it to act as a contrast agent during an MRI scan. Selecting the appropriate ligand depends on the functional groups as well. Most ligands used have derivatives with an added bromine that can substitute other functional groups. The ligand chosen also affects the crystal structure, so the ligand can be chosen based on a desired structure. General Procedure: 1. Dissolve lanthanide salt in desired solvents. 2. Add ligand to the solution. 3. Reflux ligand for 45-60 minutes. 4. Allow solution to cool. 5. Filter solution to remove solid impurities. 6. Pipette solution into test tubes. 7. Put test tubes in a jar filled with diethyl ether. 8. Using Slow Vapor Diffusion, wait until formation of crystals. The typical solvents used are ethanol and toluene because the complexes are soluble in ethanol, but not toluene, so this reduces the overall solubility, promoting crystallization. The general procedure can be modified for different ligands based on what has worked in the past. For example, letting the solution sit for a couple of days before filtering sometimes causes complexes to crystallize directly in the round bottom flask. Additional reagents can be added to the reaction flask to attempt the formation of a multi-nuclear coordination compound. The jars create an environment that allows slow vapor diffusion to form crystals. The highly volatile diethyl ether slowly diffuses into the test tubes mixing together and forming a new solution. The complexes are insoluble with diethyl ether, so they will be supersaturated in the solution after the diethyl ether enters. If the complex can find a nucleation site in the test tube (i.e. a microscopic scratch on the side), crystallization will begin. If there are no nucleation sites, the complex will precipitate out. The diethyl ether enters the test tubes slowly allowing for the crystals to form in high enough quality to allow their structure to be found via X-ray crystallography. Figure 4. Lanthanide metals luminesce at specific wavelengths in narrow bands primarily in the visible or NIR spectrum. The specific wavelength allows the lanthanide metals to be found when they attach to something, creating uses in fields such as cancer diagnosis. Figure 7. Reaction set-up for typical synthesis. Figure 2. Luminescent lanthanide containing compounds under UV lamp (Sm – pink; Tb – green; Eu – red). Figure 3a & 3b. Growing crystals via slow vapor diffusion. Ligand Synthesis Lanthanide Coordination Crystal Growth X-ray Crystallography Group Imine synthesis begins by combining the amine and aldehyde components in a round bottom flask containing ethanol as a solvent. The solutions are refluxed on medium heat and high stir for 1-2 hours to ensure progression of the reactions. After the refluxes are complete, the solutions were left to cool to room temperature to promote precipitation. Figure 6. Sample vanillin derivatives used as aldehydes and sample amines used in synthesizing Schiff base ligands. Figure 8. Synthesis of bidentate and monodentate Schiff-based ligands from vanillin derivatives and amines. Single crystal X-ray diffraction is a valuable tool in determining the structures of complexes synthesized in the functional materials lab. As the name implies, a single crystal is required for analysis and must be free of cracks, twinning, and other deformities. After initial screening under a microscope with polarized light, a single crystal may be mounted onto a loop for diffraction. Once the crystal is mounted and centered a beam of X-rays is directed at the center of the crystal. This initial beam is used to determine if the crystal is of sufficient quality to continue diffraction. If the crystal is acceptable, the diffraction continues and data is collected as the crystal is rotated on its loop. Depending on the specific machine being used, an initial crude structure is given and the software Olex2 is then used to refine the structure in preparation for publication. Figure 5. Crystal structure of the complex that results from the coordination of a lanthanide metal to the Schiff base ligand composed of o-vanillin and o-phenyldiamine. The oxygen atoms of the ligand donate their electron pairs to make a bond coordinate bond with the ligand. If a significant amount of the ligand formed a solid, the solution was filtered via vacuum filtration and the imine collected. For many of the monodentate ligands however, they are liquids at room temperature and had to be stored as either a molar solution in ethanol or as a pure liquid. Some ligands that were solid at room temperature but soluble in ethanol and were rotary evaporated to remove the ethanol to recover the imine. After the products were isolated, NMR samples were run to show the absence of the aldehyde and amine peaks and the presence of the imine peaks, indicating the success of the reaction. Figure 1. The lanthanide luminesces through the antenna effect. Light is absorbed by the ligand and transfers energy to the lanthanide, causing it to enter an excited state. The lanthanide then relaxes and releases light through luminescence. Lanthanide complexes have many applications due to their spectroscopic, magnetic and luminescent properties. These applications include: (1) detecting tumors under a UV light and observing whether the area contains a luminescent lanthanide; (2) multiple variations of Gd(III) chelates are used in MRI as contrasting agents; (3) and lanthanides are prevelant in OLED television displays due to these sharp, strong lanthanide emissions. These luminescent properties would not be possible without the use of organic ligands on lanthanide ions to provide stability and utilize the Antennae Effect. The organic ligands absorb UV light and transfer the energy to lanthanide ion. Once the lanthanide ion is excited by the ligand, it releases the energy in a narrow light emission that depends on the lanthanide ion in the complex. The experiments conducted used organic Schiff base salen-type ligands with lanthanide ions, transition metal ions, or both to make interesting metal complexes. Single crystal X-ray crystallography determines the structure of the complexes, which can then be further studied for other useful properties. Figure 9. Examples of the crystal structures that results from the ligand reacted in certain conditions: (a) The pictured ligand reacted with Nd(NO3)3 to form a neodymium compound containing two ligands bound via the oxygens; (b) The pictured ligand reacted with Cd(OAc)2 and Nd(OAc)3 to form a barrel-shaped structure containing 12 ligands and 8 neodymium atoms. Figure 10. X-ray quality crystals are removed from test tubes and collected in oil to prevent the solvent from drying out. They’re then placed on a loop in preparation for X-ray diffractometry. Once the X-ray diffraction data is collected, the structure can usually be deciphered. Further research will consist primarily of synthesizing more ligands and metal complexes. Additional characterization of the metal complexes will be done involving fluorimetry, IR spectroscopy, and NMR spectroscopy. Fluorimetry of the metal complexes will determine the quantum yield. Knowledge of this helps determine if the complexes will be good candidates for applications utilizing their luminescence. Some of the ligands synthesized will contain a bromine functional group which will allow a number of substitutions to occur in order to functionalize the complex. Once substituted, the metal complexes can find potential uses as contrast reagents, NMR shift reagents, or as biomarkers. The ring structure shown in Figure 10 shows promise as a biomarker due to the high number of lanthanide metals and lack of toxic cadmium as in the barrel structures. The high number of lanthanides increases the chances of the lanthanide centers reaching the targeted area as well as causing the targeted area to luminesce brighter once subjected to UV light. Figure 11. Example of MRI taken without contrast agent (left) and with a Gd complex as a contrast agent (right). Figure 12. Example of the effect of a Eu NMR shift reagent on n-pentanol. The overlapping peaks shown in (a) are separated enough to be distinguished in (b).