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Eric van de Weg DLO - PRI,  The Netherlands WP3:   Identification  &  characterisation  of  QTL  for  fruit quality  &  disease resistance  by a  Pedigree Based Approach (PBA)   Maria José Aranzana IRTA,  Spain
Objectives ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Objectives ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Objectives ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Approach I: clarifying genetics of traits ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Approach II: Genetic structure of EU Breeding Programs ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Tasks ,[object Object],[object Object],T2:  Identification of QTL for new traits  by    classical QTL mapping  (M11-M54) T3:  Identification and fine-mapping of QTL     by the PBA-approach  (M11-M54) T4:  Assessment of genetic diversity  within   European breeding programmes     (M1-M48) T5:  Mining apple QTL-alleles   in breeding   germplasm  (M12-M48) T6:  Robustness apple QTL over environments   (M25-M54)
Action plan ,[object Object],[object Object],T2:  Identification of QTL for new traits     by classical QTL mapping   (M11-M54) T3:   Identification and fine-mapping of QTL     by the PBA-approach   (M11-M54) T4:   Assessment of genetic diversity   within European breeding programmes   (M1-M48) T5:   Mining apple QTL-alleles   in breeding   germplasm  (M12-M48) T6:   Robustness apple QTL over environm.  (M25-M54) ------ M14 Apple: DNA Polish germplasm probably not available anymore Peach: maker capacity to be budgeted Peach: 4 populations, for 1 pop SNP-arrays to be budgeted/ordered  Apple: Research on chilling required has to be elaborated Apple & Peach: DNA-Bank to be established for FB-Germplas,
Outcomes: QTLs & linked markers From M12 on ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],From M18 on
Interactions planned with other WPs ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],WP8  Workshops on PBA based QTL analyses WP4  - Genetic diversity old & recent cultivars   -  Platform for validation LD-discovered genes WP1   New QTL/’genes’ for adaptation to MAB WP5  Use of new WP5-phenotyping methods for   QTL-mapping of new traits   (few progenies) WP7  Support design conceptual model   FB-DB
Deliverables ,[object Object],D2: New version of FlexQTL TM   software   M24 ------ M14 ,[object Object],[object Object],[object Object],D4: Paper on the genetic diversity  as  exploited in EU apple & peach breeding  M48   D5 : Paper on some QTLs in apple M52   D6: Report on identified QTL:   Location, mode of action, sources,   stability & linked markers.  M54
Partners involved ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],Kick-off Meeting

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QTL mapping for fruit quality and disease resistance

  • 1. Eric van de Weg DLO - PRI, The Netherlands WP3: Identification & characterisation of QTL for fruit quality & disease resistance by a Pedigree Based Approach (PBA) Maria José Aranzana IRTA, Spain
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