2. Functional groups give specific properties
found together in a variety of different molecules.
Each functional group has specific properties that,
when attached to a larger molecule, in turn give
the larger molecules specific properties.
several functional groups in biology, including
alcohols, aldehydes, ketones, acids, amines,
phosphates, and thiols.
3.
4. An important biological molecules containing functional
groups is the amino acids, which have both a carboxyl group
and an amino group attached to the same carbon atom, called
the α carbon.
Also attached to the α carbon atom are a hydrogen atom and a
side chain, or R group
Different side chains have different chemical compositions,
structures, and properties.
Each of the 20 amino acids found in proteins has a different
side chain that gives it its distinctive chemical properties.
Because they possess both carboxyl and amino groups, amino
acids are simultaneously acids and bases.
5. Isomers have different arrangements of the
same atoms
Isomers are molecules that have the
same chemical formula but different
arrangements of the atoms.
(The prefix iso- meaning “same,”).
we will consider two: structural
isomers and optical isomers.
6. Structural isomers
It differ in how their atoms are joined together.
Consider two simple molecules, each composed
of 4 carbon and 10 hydrogen atoms bonded
covalently, both with the formula C4H10.
These atoms can be linked in two different ways,
resulting in two forms of the molecule:
7. Optical isomers
The carbon atom has four different atoms or groups
attached to it.
This pattern allows two different ways of making the
attachments, each the mirror image of the other.
Such a carbon atom is an asymmetrical carbon, and the
pair of compounds are optical isomers of each other.
You can imagine your right and left hands as optical
isomers.
Just as a glove is specific for a particular hand, some
biochemical molecules can interact with one optical
isomer of a compound, but are unable to “fit” the other.
8.
9. Cont…
The α carbon in an amino acid is an asymmetrical
carbon because it is bonded to four different
functional groups.
Therefore, amino acids exist in two isomeric
forms, called D-amino acids and L-amino acids.
D and L stand for right (dextro) and left (levo),
respectively.
Only L-amino acids are commonly found in most
organisms, and their presence is an important
chemical “signature” for life.
10.
11. Molecules vary in size
Some are small, such as H2 and CH4.
Others are larger, such as a molecule of table
sugar (Sucrose, C12H22O11), which has 45
atoms.
Still other molecules, especially proteins
such as hemoglobin, are gigantic, sometimes
containing tens of thousands of atoms.