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Foundations in Microbiology
Chapter
8
PowerPoint to accompany
Fifth Edition
Talaro
Copyright The McGraw-Hill Companies, Inc. Permission required for reproduction or display.
Microbial Metabolism: The Chemical
Crossroads of Life
Chapter 8
Metabolism
The sum total of all chemical
reactions & physical workings
occurring in a cell
4
2 types of metabolism
• Anabolism - biosynthesis
– building complex molecules from simple ones
– requires energy (ATP)
• Catabolism - degradation
– breaking down complex molecules into simple
ones
– generates energy (ATP)
5
6
7
8
Enzyme structure
• Simple enzymes – consist of protein alone
• Conjugated enzymes or holoenzymes –
contain protein and nonprotein molecules
– apoenzyme –protein portion
– cofactors – nonprotein portion
• metallic cofactors – iron, copper, magnesium
• coenzymes -organic molecules - vitamins
9
10
Enzyme-substrate interactions
11
• Exoenzymes – transported extracellularly,
where they break down large food
molecules or harmful chemicals; cellulase,
amylase, penicillinase
• Endoenzymes – retained intracellularly &
function there
12
13
• Constitutive enzymes – always present,
always produced in equal amounts or at
equal rates, regardless of amount of
substrate; enzymes involved in glucose
metabolism
• Induced enzymes – not constantly present,
produced only when substrate is present,
prevents cell from wasting resources
14
15
• Synthesis or condensation reactions –
anabolic reactions to form covalent bonds
between smaller substrate molecules,
require ATP, release one molecule of water
for each bond
• Hydrolysis reactions– catabolic reactions
that break down substrates into small
molecules, requires the input of water
16
17
Transfer reactions by enzymes
1. Oxidation-reduction reactions – transfer of
electrons
2. Aminotransferases – convert one type of amino
acid to another by transferring an amino group
3. Phosphotransferases – transfer phosphate groups,
involved in energy transfer
4. Methyltransferases – move methyl groups from
one molecule to another
5. Decarboxylases – remove carbon dioxide from
organic acids
18
Metabolic pathways
19
Control of enzyme activity
1. Competitive inhibition – substance that
resembles normal substrate competes with
substrate for active site
2. Feedback inhibition – concentration of product at
the end of a pathway blocks the action of a key
enzyme
3. Feedback repression – inhibits at the genetic
level by controlling synthesis of key enzymes
4. Enzyme induction – enzymes are made only
when suitable substrates are present
20
Competitive inhibition
21
Energy –capacity to do work or
cause change
• Endergonic reactions – consume energy
• Exergonic reactions – release energy
22
Redox reactions
• always occur in pairs
• There is an electron donor and electron
acceptor which constitute a redox pair
• The process salvages electrons & their
energy.
• released energy can be captured to
phosphorylate ADP or another compound
23
Electron carriers
• resemble shuttles that are loaded and
unloaded with electrons and hydrogen
• most carriers are coenzymes, NAD, FAD,
NADP, coenzyme A & compounds of the
respiratory chain
24
NAD reduction
25
Electron carriers
26
ATP
• 3 part molecule consisting of
– adenine – a nitrogenous base
– ribose – a 5-carbon sugar
– 3 phosphate groups
• Removal of the terminal phosphate releases
energy
27
ATP
28
Phosphorylation of glucose by
ATP
29
Formation of ATP
1. substrate-level phosphorylation
2. oxidative phosphorylation
3. photophosphorylation
30
substrate-level phosphorylation
31
Catabolism of glucose
1. Glycolysis
2. Tricarboxylic acid cycle, Kreb’s cycle
3. Respiratory chain, electron transport
32
Metabolic strategies
Pathways
involved
Final e-
acceptor ATP yield
Aerobic
respiration
Glycolysis,
TCA, ET
O2 38
Anaerobic
respiration
Glycolysis,
TCA, ET
NO3
-
, So4
-2
,
CO3
-3
variable
Fermentation Glycolysis Organic
molecules
2
33
Overview of aerobic respiration
34
Overview of aerobic respiration
• Glycolysis – glucose (6C) is oxidized and
split into 2 molecules of pyruvic acid (3C)
• TCA – processes pyruvic acid and
generates 3 CO2 molecules
• Electron transport chain – accepts electrons
NADH & FADH, generates energy through
sequential redox reactions called oxidative
phosphorylation
35
Glycolysis
36
TCA cycle
37
Electron transport system
38
Chemiosmosis
39
Fermentation
• Incomplete oxidation of glucose or other
carbohydrates in the absence of oxygen
• Uses organic compounds as terminal electron
acceptors
• Yields a small amount of ATP
• Production of ethyl alcohol by yeasts acting on
glucose
• Formation of acid, gas & other products by the
action of various bacteria on pyruvic acid
40
Fermentation
41
Products of fermentation
42
• Many pathways of metabolism are bi-directional
or amphibolic
• Metabolites can serve as building blocks or
sources of energy
– Pyruvic acid can be converted into amino acids through
amination
– Amino acids can be converted into energy sources
through deamination
– Glyceraldehyde-3-phosphate can be converted into
precursors for amino acids, carbohydrates and fats
43
44

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Microbial metabolism4578

  • 1. Foundations in Microbiology Chapter 8 PowerPoint to accompany Fifth Edition Talaro Copyright The McGraw-Hill Companies, Inc. Permission required for reproduction or display.
  • 2. Microbial Metabolism: The Chemical Crossroads of Life Chapter 8
  • 3. Metabolism The sum total of all chemical reactions & physical workings occurring in a cell
  • 4. 4 2 types of metabolism • Anabolism - biosynthesis – building complex molecules from simple ones – requires energy (ATP) • Catabolism - degradation – breaking down complex molecules into simple ones – generates energy (ATP)
  • 5. 5
  • 6. 6
  • 7. 7
  • 8. 8 Enzyme structure • Simple enzymes – consist of protein alone • Conjugated enzymes or holoenzymes – contain protein and nonprotein molecules – apoenzyme –protein portion – cofactors – nonprotein portion • metallic cofactors – iron, copper, magnesium • coenzymes -organic molecules - vitamins
  • 9. 9
  • 11. 11 • Exoenzymes – transported extracellularly, where they break down large food molecules or harmful chemicals; cellulase, amylase, penicillinase • Endoenzymes – retained intracellularly & function there
  • 12. 12
  • 13. 13 • Constitutive enzymes – always present, always produced in equal amounts or at equal rates, regardless of amount of substrate; enzymes involved in glucose metabolism • Induced enzymes – not constantly present, produced only when substrate is present, prevents cell from wasting resources
  • 14. 14
  • 15. 15 • Synthesis or condensation reactions – anabolic reactions to form covalent bonds between smaller substrate molecules, require ATP, release one molecule of water for each bond • Hydrolysis reactions– catabolic reactions that break down substrates into small molecules, requires the input of water
  • 16. 16
  • 17. 17 Transfer reactions by enzymes 1. Oxidation-reduction reactions – transfer of electrons 2. Aminotransferases – convert one type of amino acid to another by transferring an amino group 3. Phosphotransferases – transfer phosphate groups, involved in energy transfer 4. Methyltransferases – move methyl groups from one molecule to another 5. Decarboxylases – remove carbon dioxide from organic acids
  • 19. 19 Control of enzyme activity 1. Competitive inhibition – substance that resembles normal substrate competes with substrate for active site 2. Feedback inhibition – concentration of product at the end of a pathway blocks the action of a key enzyme 3. Feedback repression – inhibits at the genetic level by controlling synthesis of key enzymes 4. Enzyme induction – enzymes are made only when suitable substrates are present
  • 21. 21 Energy –capacity to do work or cause change • Endergonic reactions – consume energy • Exergonic reactions – release energy
  • 22. 22 Redox reactions • always occur in pairs • There is an electron donor and electron acceptor which constitute a redox pair • The process salvages electrons & their energy. • released energy can be captured to phosphorylate ADP or another compound
  • 23. 23 Electron carriers • resemble shuttles that are loaded and unloaded with electrons and hydrogen • most carriers are coenzymes, NAD, FAD, NADP, coenzyme A & compounds of the respiratory chain
  • 26. 26 ATP • 3 part molecule consisting of – adenine – a nitrogenous base – ribose – a 5-carbon sugar – 3 phosphate groups • Removal of the terminal phosphate releases energy
  • 29. 29 Formation of ATP 1. substrate-level phosphorylation 2. oxidative phosphorylation 3. photophosphorylation
  • 31. 31 Catabolism of glucose 1. Glycolysis 2. Tricarboxylic acid cycle, Kreb’s cycle 3. Respiratory chain, electron transport
  • 32. 32 Metabolic strategies Pathways involved Final e- acceptor ATP yield Aerobic respiration Glycolysis, TCA, ET O2 38 Anaerobic respiration Glycolysis, TCA, ET NO3 - , So4 -2 , CO3 -3 variable Fermentation Glycolysis Organic molecules 2
  • 33. 33 Overview of aerobic respiration
  • 34. 34 Overview of aerobic respiration • Glycolysis – glucose (6C) is oxidized and split into 2 molecules of pyruvic acid (3C) • TCA – processes pyruvic acid and generates 3 CO2 molecules • Electron transport chain – accepts electrons NADH & FADH, generates energy through sequential redox reactions called oxidative phosphorylation
  • 39. 39 Fermentation • Incomplete oxidation of glucose or other carbohydrates in the absence of oxygen • Uses organic compounds as terminal electron acceptors • Yields a small amount of ATP • Production of ethyl alcohol by yeasts acting on glucose • Formation of acid, gas & other products by the action of various bacteria on pyruvic acid
  • 42. 42 • Many pathways of metabolism are bi-directional or amphibolic • Metabolites can serve as building blocks or sources of energy – Pyruvic acid can be converted into amino acids through amination – Amino acids can be converted into energy sources through deamination – Glyceraldehyde-3-phosphate can be converted into precursors for amino acids, carbohydrates and fats
  • 43. 43
  • 44. 44