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A Multiple Ontology, Concept-Based, Context-Sensitive Search and Retrieval Robert Moskovitch and Prof. Yuval Shahar Medical Informatics Research Center Ben Gurion University, Israel
Clinical Guidelines ,[object Object],[object Object],[object Object]
The DEGEL Framework ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
The Goal ,[object Object],[object Object],[object Object]
Classification and Concept Based Search ,[object Object],[object Object],[object Object]
Example Markup, Using The Asbru Ontology ,[object Object],[object Object],The markup process gradually converts a free-text-based CPG to a semi-structured, then fully structured one, maintaining all formats in parallel (a hybrid architecture) ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],This guideline is intended only for women who are pregnant and who are at high risk for gestational diabetes and who had a glucose-tolerance test… The main goal is reduction of potential hypertension… The guideline uses mainly dietary measures… If a need for insulin develops, use a guideline for using short-acting insulin…
Context-Sensitive Search  Within Knowledge Roles of Ontologies ,[object Object],[object Object],Example: searching within articles summarizing clinical studies [G.Purcell, 1996]. According to Purcell, a context defines a semantically meaningful region of the document for searching, and thus facilitates precise retrieval of information from the medical literature
The Information Retrieval Task in the DEGEL Framework ,[object Object],[object Object],[object Object],[object Object],[object Object],Matching Process Retrieved Documents Content Indexing Document Representation Document Collection Query Formulation Query Representation Information Need  ? ,[object Object],Source Ontology Markup Ontology GLS GLM N : 1
Representing Ontolgies for Search  Purposes ,[object Object]
Search Type Not relevant . No query . An element that doesn’t have content or its content is irrelevant for search . Unsearchable Boolean Requested concepts using conjunction, disjunction operators between indices .  An element represents the conceptual classification of the guideline Semantic Index Metric An integer constraint using operators such as   ‘>’  or ‘>=’ etc .. An element that its content represents an integer value . Integer Metric A date constraint using operators such as   ‘>’  or ‘>=’ etc . An element that its content represents a calendar date . Date Boolean Requested string values with conjunction, disjunction relations . An element containing one or more fixed string values . Text Multiple Value Boolean Requested string values with disjunction being the only possible relation . An element that may contain only a single fixed string value . Text Value Metric Keywords with disjunction or conjunction logic operator . An element containing a free text content . Free Text Relevance measure Querying Options Description Search Type
Search Scope Search both that element and its descendents . Children-Included No search at that element, search only its descendents . Only-Children Search the element without descendents   Search-Self No search at that element nor at its descendents - elements that don’t contain any content, and their descendents' contents aren’t relevant to them .  None Description Search Scope
Query Interface
Results Interface
Evaluation ,[object Object],[object Object],[object Object],[object Object]
Concept-based and Context-    sensitive evaluation ,[object Object],[object Object],[object Object],[object Object]
Queries and Judgments ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Evaluation Measures ,[object Object],RECALL =  Number of Relevant Documents Retrieved  Total Number of Documents Retrieved  Number of Relevant Documents Retrieved  Number of Relevant Documents in the Document Collection
Evaluation Hypotheses ,[object Object],[object Object]
Results – Contextual search
Context Sensitive in addition to Full Text search
Results – Concept based search in   addition to three contexts
Results – Concept based search in  addition to full-text search
Results – Concept based search in    addition to single context
Discussion ,[object Object],[object Object]
Questions ? [email_address]

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A Multiple Ontology, Concept based, Context-sensitive Search and Retrieval

  • 1. A Multiple Ontology, Concept-Based, Context-Sensitive Search and Retrieval Robert Moskovitch and Prof. Yuval Shahar Medical Informatics Research Center Ben Gurion University, Israel
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  • 10. Search Type Not relevant . No query . An element that doesn’t have content or its content is irrelevant for search . Unsearchable Boolean Requested concepts using conjunction, disjunction operators between indices . An element represents the conceptual classification of the guideline Semantic Index Metric An integer constraint using operators such as ‘>’ or ‘>=’ etc .. An element that its content represents an integer value . Integer Metric A date constraint using operators such as ‘>’ or ‘>=’ etc . An element that its content represents a calendar date . Date Boolean Requested string values with conjunction, disjunction relations . An element containing one or more fixed string values . Text Multiple Value Boolean Requested string values with disjunction being the only possible relation . An element that may contain only a single fixed string value . Text Value Metric Keywords with disjunction or conjunction logic operator . An element containing a free text content . Free Text Relevance measure Querying Options Description Search Type
  • 11. Search Scope Search both that element and its descendents . Children-Included No search at that element, search only its descendents . Only-Children Search the element without descendents Search-Self No search at that element nor at its descendents - elements that don’t contain any content, and their descendents' contents aren’t relevant to them . None Description Search Scope
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  • 20. Context Sensitive in addition to Full Text search
  • 21. Results – Concept based search in addition to three contexts
  • 22. Results – Concept based search in addition to full-text search
  • 23. Results – Concept based search in addition to single context
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