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Quinolones
As an antibacterial agent
Arun.V.
2nd sem
M.Sc. BMB,
14368005
Quinolones
• The quinolones are a family
of synthetic bactericidal broad
spectrum drugs
• Derived from quinine.
• Figure shows the basic
fluoroquinolone molecule or
‘pharmacore’.
• The addition of a fluorine molecule at
position 6 was one of the earliest
changes to the structure.
• First gen. of Quinolones began with Nalidixic Acid (1962)
discovered by George Lesher & coworkers
• concentration-dependent bacterial killing.
•Zwitter Ionic in nature. Acidic (-COOH) group is common.
Quinolones
Journal of Antimicrobial Chemotherapy (2003) 51, Suppl. S1, 1–11 | DOI: 10.1093/jac/dkg212 | Development of the
quinolones | Monique I. Andersson and Alasdair P. MacGowan
Quinolones
Generation Drug Names Spectrum
1st
Cinoxacin
Nalidixic Acid
Oxolinic acid
Gram -ve but not
Pseudomonas
2nd
Addition of fluorine
Norfloxacin
Ciprofloxacin
Ofloxacin
Gram –ve (including
Pseudomonas)
some Gram+ (S. aureus)
3rd
Levofloxacin
Sparfloxacin
Moxifloxacin
Gemifloxacin
Same as 2nd generation:
extended Gram +ve
Coverage and expanded
activity against atypical
pathogens
4th
*Trovafloxacin
(removed from market in 1999)
Gatifloxacin
(Tequin removed from clinical use)
Same as 3rd generation:
broad anaerobic coverage
Generations of Quinolones
Quinolones
Development
of Quinolones
Quinolones
Spectrum of activity
Gram Positive
• Staphylococcus aureus
• Streptococcus
pneumoniae
• Some resistant
Streptococci
• Enterococcus sp
Gram Negetive
• E. coli
• Klebsiella sp
• Enterobacter sp
• Proteus sp
• Salmonella
• Shigella
• Serratia marcescens
• Neisseria sp
• Pseudomonas aeruginosaAtypical Bacteria
• Legionella pneumophila
• Chlamydia sp.
• Mycoplasma sp.
• Ureaplasma realyticum
BROAD SPECTRUM DRUG
Quinolones
Mechanism of action
• DNA gyrase (Topo II) is composed of two
pairs of subunits, 2GyrA and 2GyrB
• encoded by genes gyrA and gyrB,
respectively.
• It is responsible for introducing and
removing DNA supercoils and for
decatenating interlocked circular DNA.
• DNA gyrase safeguards against the
occurrence of replication induced
structural changes before advancement
of the replication fork.
Quinolones
• Topoisomerase IV In E. coli, it has two
ParC and two ParE subunits
• encoded by genes parC and parE genes.
• removal of DNA supercoils and
separation of newly built daughter DNA
after replication is complete.
• Topo II work before the replication fork
and topo IV works after the replication
fork on newly formed DNA
Quinolones
Mechanism of action
Quinolones block the reaction and trap gyrase or topoisomerase IV as a
drug-enzyme-DNA complex, with subsequent release of lethal, double-
stranded DNA breaks. These strands breaks leads to SOS response which
leads to DNA repair mechanisms involving low fidelity DNA pol. which
cause lethal mutations leading to genomic toxicity and finally cell death
Nature Reviews Microbiology 8, 423-435 (June 2010) | Michael A. Kohanski, Daniel J. Dwyer & James J. Collins
Mechanism of action
Quinolones
Therapeutic Uses
Diseases / infections Quinolone uses
Genito urinary Infections •Most commonly used
•UTI Caused by E.Coli
•Complicated UTI
•Norfloxacin , Levofloxacin, Ciprofloxacin
Prostatitis •Very effective, excellent penetration to
the tissue
•Levofloxacin is first line agent
•Ciprofloxacin in Gram –ve resistant
•Norfloxacin ,& Ofloxacin
Bacterial diarrheoas •Very effective against shigella,
salmonella, E.coli, Campylobacter jejuni
•Norfloxacin, ciprofloxacin , ofloxacin
STI •Effective against N. gonorrhoeae & C.
trachomatis
•Gatifloxacin and ofloxacin or sparfloxacin
•Pelvic inflammatory disease
Quinolones
Therapeutic Uses
• Skin and soft tissue infections (not involving S.
aureus) and also in diabetic foot infections
• Used widely in respiratory related infections.
Fluroquinolone Preferred Uses
Norloxacin UTI, Bacterial Diarrheoas
Ciprofloxacin UTI, Typhoid, Bacterial diarrheoas, Gonorrhea
Ofloxacin Tuberculosis, Leprosy, Atypical Pneumonia, Chlamydial
infections
Levofloxacin pnumonia, Bronchitis, UTI, Skin & soft tissue infections
Gatifloxacin Pnumonia, Bronchitis, UTI, Gonnococcal infections
Moxifloxacin Pnumonia, Bronchitis, Sinusitis, otitis media
Quinolones
Mechanisms of resistance
• Involves amino acid substitutions in a region of the GyrA or
ParC subunit termed the “quinolone-resistance–determining
region” (QRDR).
• This region occurs on the DNA-binding surface of the enzyme
• The QRDR in DNA gyrase is near tyrosine 122.
• Additional mutations in gyrA or mutations in gyrB or parC
augment resistance
• These substitutions decrease susceptibility by they reducing
drug affinity. Alternatively, mutations may marginally
• Also impair target enzyme function to an extent
TARGET-ENZYME RESISTANCE MECHANISMS
Quinolones
Mechanisms of resistance
• Gram-ve bacteria regulate membrane permeability by altering
expression of outer membrane porin proteins that form
channels for passive diffusion such as outer membrane proteins
OmpF and OmpC
• the Acr AB-TolC efflux pump plays a major role in quinolone
Mutations in acrR (a epressor of acrAB) increase pump activity.
• Mutations that inactivate marR (a repressor of marA) allow
MarA to activate acrAB, tolC, and a gene that decreases
translation of ompF, thus collectively decreasing influx and
increasing efflux of quinolones
EFFLUX RESISTANCE MECHANISMS
Quinolones
Mechanisms of resistance
• The plasmid-mediated quinolone resistance gene
was named “qnr.”
• Produce a 219- aa protein belonging to the
pentapeptide repeat family, which are involved in
protein-protein interactions
• Purified Qnr protein bind to and protect both
topo II & topo VI from inhibition by ciprofloxacin
• qnr has been acquired from some other source,
but it is not known where qnr originated
PLASMID-MEDIATED RESISTANCE
Quinolones
Mechanisms of resistance
DOI: 10.1039/C2MB25090J (Paper) Mol. BioSyst., 2012, 8, 2303-2311 | Hui Li et. Al.| Alterations of protein complexes
& pathways in genetic information flow & response to stimulus contribute to E. coli resistance to balofloxacin
Quinolones
Side effects
• Articular Damage:
– articular cartilage damage, and joint swelling
• Other adverse reactions:
– Tendon rupture (flourosis of tendons)
– Hypersensitivity
– Nausea, vomiting, diarrhea, Headache, dizziness,
other common antibiotic related side effects.
• Chemotherapy of quinolones in children and
newborns is still a debate (otitis media
resistance)
Quinolones
Future of Quinolones
• JNJ-Q2 -acute bacterial skin and skin-structure
infections & community- Acquired pneumonia
& against MRSA
• Delafloxacin (RX-3341) -against Gram-positive
bacteria such as MRSA. Anionic character
• Nemonoxacin -non-fluorinated Q. undergoing
clinical trials
• Development of Quinolones sensitive to DNA
related enzymes for cancer chemotherapy
Quinolones
Reference
• Monique I. Andersson and Alasdair P. MacGowan, Development of the
quinolones, Journal of Antimicrobial Chemotherapy (2003) 51, Suppl. S1,
1–11 DOI: 10.1093/jac/dkg212
• George A. Jacoby, Mechanisms of Resistance to Quinolones, Clinical
Infectious Diseases 2005; 41:S120–6 2005 by the Infectious Diseases
Society of America
• David T. Bearden, Larry H. Danziger, PharmD, Mechanism of Action of and
Resistance to Quinolones, www.medscape.com/viewarticle/418293_print
• Hui Li et. Al., DOI: 10.1039/C2MB25090J (Paper) Mol. BioSyst., 2012, 8,
2303-2311, Alterations of protein complexes and pathways in genetic
information flow and response to stimulus contribute to E. coli resistance
to balofloxacin
• Michael A. Kohanski, Daniel J. Dwyer & James J. Collins, Nature Reviews
Microbiology 8, 423-435 (June 2010)
Quinolones

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Quinolones | drug develoupment | mechanism of action | future

  • 1. Quinolones As an antibacterial agent Arun.V. 2nd sem M.Sc. BMB, 14368005
  • 2. Quinolones • The quinolones are a family of synthetic bactericidal broad spectrum drugs • Derived from quinine. • Figure shows the basic fluoroquinolone molecule or ‘pharmacore’. • The addition of a fluorine molecule at position 6 was one of the earliest changes to the structure. • First gen. of Quinolones began with Nalidixic Acid (1962) discovered by George Lesher & coworkers • concentration-dependent bacterial killing. •Zwitter Ionic in nature. Acidic (-COOH) group is common. Quinolones
  • 3. Journal of Antimicrobial Chemotherapy (2003) 51, Suppl. S1, 1–11 | DOI: 10.1093/jac/dkg212 | Development of the quinolones | Monique I. Andersson and Alasdair P. MacGowan Quinolones
  • 4. Generation Drug Names Spectrum 1st Cinoxacin Nalidixic Acid Oxolinic acid Gram -ve but not Pseudomonas 2nd Addition of fluorine Norfloxacin Ciprofloxacin Ofloxacin Gram –ve (including Pseudomonas) some Gram+ (S. aureus) 3rd Levofloxacin Sparfloxacin Moxifloxacin Gemifloxacin Same as 2nd generation: extended Gram +ve Coverage and expanded activity against atypical pathogens 4th *Trovafloxacin (removed from market in 1999) Gatifloxacin (Tequin removed from clinical use) Same as 3rd generation: broad anaerobic coverage Generations of Quinolones Quinolones
  • 6. Spectrum of activity Gram Positive • Staphylococcus aureus • Streptococcus pneumoniae • Some resistant Streptococci • Enterococcus sp Gram Negetive • E. coli • Klebsiella sp • Enterobacter sp • Proteus sp • Salmonella • Shigella • Serratia marcescens • Neisseria sp • Pseudomonas aeruginosaAtypical Bacteria • Legionella pneumophila • Chlamydia sp. • Mycoplasma sp. • Ureaplasma realyticum BROAD SPECTRUM DRUG Quinolones
  • 7. Mechanism of action • DNA gyrase (Topo II) is composed of two pairs of subunits, 2GyrA and 2GyrB • encoded by genes gyrA and gyrB, respectively. • It is responsible for introducing and removing DNA supercoils and for decatenating interlocked circular DNA. • DNA gyrase safeguards against the occurrence of replication induced structural changes before advancement of the replication fork. Quinolones
  • 8. • Topoisomerase IV In E. coli, it has two ParC and two ParE subunits • encoded by genes parC and parE genes. • removal of DNA supercoils and separation of newly built daughter DNA after replication is complete. • Topo II work before the replication fork and topo IV works after the replication fork on newly formed DNA Quinolones Mechanism of action
  • 9. Quinolones block the reaction and trap gyrase or topoisomerase IV as a drug-enzyme-DNA complex, with subsequent release of lethal, double- stranded DNA breaks. These strands breaks leads to SOS response which leads to DNA repair mechanisms involving low fidelity DNA pol. which cause lethal mutations leading to genomic toxicity and finally cell death Nature Reviews Microbiology 8, 423-435 (June 2010) | Michael A. Kohanski, Daniel J. Dwyer & James J. Collins Mechanism of action Quinolones
  • 10. Therapeutic Uses Diseases / infections Quinolone uses Genito urinary Infections •Most commonly used •UTI Caused by E.Coli •Complicated UTI •Norfloxacin , Levofloxacin, Ciprofloxacin Prostatitis •Very effective, excellent penetration to the tissue •Levofloxacin is first line agent •Ciprofloxacin in Gram –ve resistant •Norfloxacin ,& Ofloxacin Bacterial diarrheoas •Very effective against shigella, salmonella, E.coli, Campylobacter jejuni •Norfloxacin, ciprofloxacin , ofloxacin STI •Effective against N. gonorrhoeae & C. trachomatis •Gatifloxacin and ofloxacin or sparfloxacin •Pelvic inflammatory disease Quinolones
  • 11. Therapeutic Uses • Skin and soft tissue infections (not involving S. aureus) and also in diabetic foot infections • Used widely in respiratory related infections. Fluroquinolone Preferred Uses Norloxacin UTI, Bacterial Diarrheoas Ciprofloxacin UTI, Typhoid, Bacterial diarrheoas, Gonorrhea Ofloxacin Tuberculosis, Leprosy, Atypical Pneumonia, Chlamydial infections Levofloxacin pnumonia, Bronchitis, UTI, Skin & soft tissue infections Gatifloxacin Pnumonia, Bronchitis, UTI, Gonnococcal infections Moxifloxacin Pnumonia, Bronchitis, Sinusitis, otitis media Quinolones
  • 12. Mechanisms of resistance • Involves amino acid substitutions in a region of the GyrA or ParC subunit termed the “quinolone-resistance–determining region” (QRDR). • This region occurs on the DNA-binding surface of the enzyme • The QRDR in DNA gyrase is near tyrosine 122. • Additional mutations in gyrA or mutations in gyrB or parC augment resistance • These substitutions decrease susceptibility by they reducing drug affinity. Alternatively, mutations may marginally • Also impair target enzyme function to an extent TARGET-ENZYME RESISTANCE MECHANISMS Quinolones
  • 13. Mechanisms of resistance • Gram-ve bacteria regulate membrane permeability by altering expression of outer membrane porin proteins that form channels for passive diffusion such as outer membrane proteins OmpF and OmpC • the Acr AB-TolC efflux pump plays a major role in quinolone Mutations in acrR (a epressor of acrAB) increase pump activity. • Mutations that inactivate marR (a repressor of marA) allow MarA to activate acrAB, tolC, and a gene that decreases translation of ompF, thus collectively decreasing influx and increasing efflux of quinolones EFFLUX RESISTANCE MECHANISMS Quinolones
  • 14. Mechanisms of resistance • The plasmid-mediated quinolone resistance gene was named “qnr.” • Produce a 219- aa protein belonging to the pentapeptide repeat family, which are involved in protein-protein interactions • Purified Qnr protein bind to and protect both topo II & topo VI from inhibition by ciprofloxacin • qnr has been acquired from some other source, but it is not known where qnr originated PLASMID-MEDIATED RESISTANCE Quinolones
  • 15. Mechanisms of resistance DOI: 10.1039/C2MB25090J (Paper) Mol. BioSyst., 2012, 8, 2303-2311 | Hui Li et. Al.| Alterations of protein complexes & pathways in genetic information flow & response to stimulus contribute to E. coli resistance to balofloxacin Quinolones
  • 16. Side effects • Articular Damage: – articular cartilage damage, and joint swelling • Other adverse reactions: – Tendon rupture (flourosis of tendons) – Hypersensitivity – Nausea, vomiting, diarrhea, Headache, dizziness, other common antibiotic related side effects. • Chemotherapy of quinolones in children and newborns is still a debate (otitis media resistance) Quinolones
  • 17. Future of Quinolones • JNJ-Q2 -acute bacterial skin and skin-structure infections & community- Acquired pneumonia & against MRSA • Delafloxacin (RX-3341) -against Gram-positive bacteria such as MRSA. Anionic character • Nemonoxacin -non-fluorinated Q. undergoing clinical trials • Development of Quinolones sensitive to DNA related enzymes for cancer chemotherapy Quinolones
  • 18. Reference • Monique I. Andersson and Alasdair P. MacGowan, Development of the quinolones, Journal of Antimicrobial Chemotherapy (2003) 51, Suppl. S1, 1–11 DOI: 10.1093/jac/dkg212 • George A. Jacoby, Mechanisms of Resistance to Quinolones, Clinical Infectious Diseases 2005; 41:S120–6 2005 by the Infectious Diseases Society of America • David T. Bearden, Larry H. Danziger, PharmD, Mechanism of Action of and Resistance to Quinolones, www.medscape.com/viewarticle/418293_print • Hui Li et. Al., DOI: 10.1039/C2MB25090J (Paper) Mol. BioSyst., 2012, 8, 2303-2311, Alterations of protein complexes and pathways in genetic information flow and response to stimulus contribute to E. coli resistance to balofloxacin • Michael A. Kohanski, Daniel J. Dwyer & James J. Collins, Nature Reviews Microbiology 8, 423-435 (June 2010) Quinolones