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Analysis of the Barley Grain
Protease Spectrum
Angela Bell, Peter C. Morris & James H. Bryce
International Centre For Brewing and Distilling,
School of Life Sciences,
Heriot – Watt University, Edinburgh, UK
Goals of the Project
• To characterise the protease activity in malted
& germinating barley grains
• To identify individual proteases using
proteomic techniques
• To investigate the significance of specific
proteases in the malting process
Overview
• Malting = Germination under controlled
conditions and up to a specific point in
germination process
• Malting stopped at point of grain modification
• Proteases = essential components of
modification process
Proteases
• Very important biologically
• Four mechanistic classes:
– Serine
– Cysteine
– Metallo
– Aspartate
• Classes can be differentiated between on the
basis of specific inhibitors
Barley Grain Proteases
• Cysteine proteases = the most active protease
class, followed by aspartate, serine then the
metalloproteases
• Cysteine already well characterised:
EP A & EP B purified, analysed & sequenced in
1980’s (Koehler, S., Ho, Tuan – Hua, D (1988), Davy, A., et al
(1998))
• Other classes not so well studied
Project So Far. . . .
I. Developed a reproducible & sensitive protease
assay
II. Carried out preliminary protease activity studies
using crude extracts of 4 - day Oxbridge malt,
with & without class specific inhibitors
III. Carried out physiological studies on protease
activated starch degrading enzymes
IV. Worked on method optimisation for protease
purification
Crude Extract Studies – 4 Day
Oxbridge Malt
Proteases During Germination
Divalent Cations
• Mn2+
& Mg2+ • Fe2+
Physiological Studies
• Three major starch degrading enzymes
putatively influenced by proteolytic activity:
Limit Dextrinase
α – Amylase
β – Amylase
• Assay enzymes in the presence of class
specific protease inhibitors & by germinating
grains in the presence of different
endoprotease inhibitors
Limit Dextrinase
• Limit dextrinase = a key starch degrading
enzyme present in germinating barley grains
• Present in an inactive form bound to a
proteinaceous inhibitor molecule
• Proposed to be activated by cysteine protease
mediated breakdown of inhibitory complex
and also reducing conditions
Limit Dextrinase – 4 Day Malt
α - Amylase
• Is synthesised during germination & is one of
the few enzymes present in the barley grain
during germination that can initiate native
starch hydrolysis
• Due to the presence of α – amylase inhibitors
in the grain, inhibitor degradation is required
for full activity
• Inhibitory complexes thought to be broken
down by protease activity
α – Amylase, Four Day Malt:
Inhibitors at Assay Stage
α – Amylase & Germination
Western Blotting
Serine & Aspartate Proteases are +ve regulators of the amount α –
amylase present during grain germination
2 3 4 2 3 4 2 3 4 2 3 4
72 KDa
55 KDa
36 KDa
Day of
Germination
Serine
and
Aspartate
Proteases
Inhibited
Only Aspartate
Proteases
Inhibited
Only Serine
Proteases
Inhibited
Control
α – Amylase & GA3
β - Amylase
• Is synthesised during grain development &
stored in an inactive form bound to a
proteinaceous inhibitor
• Putatively activated during grain germination
by protease activity & / or reducing conditions
• Been suggested that β – amylase degraded by
serine class protease activity
β – Amylase 4 Day Malt
• Extraction Stage:
• Assay Stage:
β – Amylase During
Germination
0
1
2
3
4
5
6
7
8
Day 1 Day 2 Day 3 Day 4 Day 5
MeanUnitsBeta-Amylase/gFlour
Control
5mM PMSF
Free β - Amylase
Conclusions
• limit dextrinase is indeed activated by cysteine class
proteases and reducing conditions, and may require
presence of ion2+
/ metalloproteases for activity
• α – amylase may be activated by aspartate and
serine class proteases
• both aspartate and serine class proteases are
important for the amount of α – amylase present in
grains during germination in a process involving GA3
• β – amylase is degraded by serine class proteases
and requires divalent cations for activity
Current & Future Prospects
• Protease purification: many issues!
- Sample stability
- “dirty” samples
- Too many proteins for positive identification
• The future = Investigations into the roles of
aspartate and serine proteases in the
gibberellic acid induced expression of alpha -
amylase
• Thank you to:
• Maltsters Association of Great Britain and
Lindisfarne Trust for funding my project
• All in Peter Morris’s Lab, Heriot – Watt
University, Edinburgh
Thank you!!

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EBC Glasgow, May 2011

  • 1. Analysis of the Barley Grain Protease Spectrum Angela Bell, Peter C. Morris & James H. Bryce International Centre For Brewing and Distilling, School of Life Sciences, Heriot – Watt University, Edinburgh, UK
  • 2. Goals of the Project • To characterise the protease activity in malted & germinating barley grains • To identify individual proteases using proteomic techniques • To investigate the significance of specific proteases in the malting process
  • 3. Overview • Malting = Germination under controlled conditions and up to a specific point in germination process • Malting stopped at point of grain modification • Proteases = essential components of modification process
  • 4. Proteases • Very important biologically • Four mechanistic classes: – Serine – Cysteine – Metallo – Aspartate • Classes can be differentiated between on the basis of specific inhibitors
  • 5. Barley Grain Proteases • Cysteine proteases = the most active protease class, followed by aspartate, serine then the metalloproteases • Cysteine already well characterised: EP A & EP B purified, analysed & sequenced in 1980’s (Koehler, S., Ho, Tuan – Hua, D (1988), Davy, A., et al (1998)) • Other classes not so well studied
  • 6. Project So Far. . . . I. Developed a reproducible & sensitive protease assay II. Carried out preliminary protease activity studies using crude extracts of 4 - day Oxbridge malt, with & without class specific inhibitors III. Carried out physiological studies on protease activated starch degrading enzymes IV. Worked on method optimisation for protease purification
  • 7. Crude Extract Studies – 4 Day Oxbridge Malt
  • 8.
  • 11. Physiological Studies • Three major starch degrading enzymes putatively influenced by proteolytic activity: Limit Dextrinase α – Amylase β – Amylase • Assay enzymes in the presence of class specific protease inhibitors & by germinating grains in the presence of different endoprotease inhibitors
  • 12. Limit Dextrinase • Limit dextrinase = a key starch degrading enzyme present in germinating barley grains • Present in an inactive form bound to a proteinaceous inhibitor molecule • Proposed to be activated by cysteine protease mediated breakdown of inhibitory complex and also reducing conditions
  • 13. Limit Dextrinase – 4 Day Malt
  • 14. α - Amylase • Is synthesised during germination & is one of the few enzymes present in the barley grain during germination that can initiate native starch hydrolysis • Due to the presence of α – amylase inhibitors in the grain, inhibitor degradation is required for full activity • Inhibitory complexes thought to be broken down by protease activity
  • 15. α – Amylase, Four Day Malt: Inhibitors at Assay Stage
  • 16. α – Amylase & Germination
  • 17. Western Blotting Serine & Aspartate Proteases are +ve regulators of the amount α – amylase present during grain germination 2 3 4 2 3 4 2 3 4 2 3 4 72 KDa 55 KDa 36 KDa Day of Germination Serine and Aspartate Proteases Inhibited Only Aspartate Proteases Inhibited Only Serine Proteases Inhibited Control
  • 18. α – Amylase & GA3
  • 19. β - Amylase • Is synthesised during grain development & stored in an inactive form bound to a proteinaceous inhibitor • Putatively activated during grain germination by protease activity & / or reducing conditions • Been suggested that β – amylase degraded by serine class protease activity
  • 20. β – Amylase 4 Day Malt • Extraction Stage: • Assay Stage:
  • 21. β – Amylase During Germination 0 1 2 3 4 5 6 7 8 Day 1 Day 2 Day 3 Day 4 Day 5 MeanUnitsBeta-Amylase/gFlour Control 5mM PMSF Free β - Amylase
  • 22. Conclusions • limit dextrinase is indeed activated by cysteine class proteases and reducing conditions, and may require presence of ion2+ / metalloproteases for activity • α – amylase may be activated by aspartate and serine class proteases • both aspartate and serine class proteases are important for the amount of α – amylase present in grains during germination in a process involving GA3 • β – amylase is degraded by serine class proteases and requires divalent cations for activity
  • 23. Current & Future Prospects • Protease purification: many issues! - Sample stability - “dirty” samples - Too many proteins for positive identification • The future = Investigations into the roles of aspartate and serine proteases in the gibberellic acid induced expression of alpha - amylase
  • 24. • Thank you to: • Maltsters Association of Great Britain and Lindisfarne Trust for funding my project • All in Peter Morris’s Lab, Heriot – Watt University, Edinburgh

Editor's Notes

  1. Work by other groups suggests that cysteine most abundant
  2. Metalloproteases by chelating divalent ions
  3. Calcium ineffective Transition metals important
  4. Proteases required for optimum alpha amylase activity