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© analytikLtd
analytikLtd
VideometerLab 3 Multi-Spectral Imaging
Rapid Non-destructive Surface Analysis
Adrian Waltho, Analytik Ltd (Cambridge, UK)
adrian.waltho@analytik.co.uk
www.analytik.co.uk/multispectral-imaging
• Light reflectance at separate colours
• Statistical image processing
• Chemical, physical and spatial properties
• Differentiate | Quantify | Report
© analytikLtd
Traditional colour imaging uses
three broad bands of colour:
Red, Green and Blue
Normal Colour Imaging
© analytikLtd
Normal Colour Imaging
• RGB photographs have
limited spectral resolution
• Chlorophyll a and b give
almost the same RGB
signal and are not
spectrally separated
Chloro-a High Low High
Chloro-b High Low High
© analytikLtd
Multispectral Imaging
Chloro-a High Low Low High
Chloro-b Med High Med Low
• Using just 4 wavelength
bands with tightly defined
ranges, Chlorophyll a and b
can easily be distinguished
• VideometerLab 3 uses 19
wavelength bands
© analytikLtd
Multispectral Imaging
• Many images obtained at
selective wavelength bands
• Each image pixel contains
spectral data points
• Spectral signature reveals
chemo-specific information
• See spatial location of
surface chemical variation
Ultraviolet Near-Infrared
Infra-Red
Red
Yellow
Green
Blue
Ultra-Violet
© analytikLtd
VideometerLab 3 Schematic
• Narrowband illumination by 19
LEDs at points between 375nm-
970nm (UV-Vis-VNIR), strobing
sequentially with precise time
control for known light output
• Integrating sphere diffuses light
onto sample from all angles
• 5 mega-pixel monochrome CCD
camera captures % reflectance
at each LED wavelength for each
image pixel, NIST calibration
• Optional Emission filter wheel
for fluorescence detection and
Bright-field or Dark-field back
lighting
Camera
LEDs
Integrating
sphere
Emission
filter
wheel
Sample
© analytikLtd
VideometerLab 3 Schematic
• Precise control at each separate
point of the 375-970nm
spectrum, only possible with
LEDs, allows optimal illumination
for best signal to noise
• Provides calibrated data, suitable
for statistical analysis and
manipulation for discovery
• Emission filters allow additional
multispectral fluorescence
imaging, with excitation at each
LED wavelength
• Powerful, user-friendly hardware
setup and image analysis
software is central to the system
Camera
LEDs
Integrating
sphere
Emission
filter
wheel
Sample
© analytikLtd
VideometerLab 3 Schematic
© analytikLtd
Simple Colony Counting
Back to Index
• The VideometerLab can be used as a simple visualisation aid – identify
the strain of microorganism you are interested in and the
VideometerLab will highlight all areas with a similar spectrum
© analytikLtd
Simple Colony Counting
Back to Index
• By producing a binary image, the VideometerLab
can count and quantify those colonies
© analytikLtd
Simple Colony Counting
Back to Index
• VideometerLab has labeled each colony and
generated size data in mm2 for each one
© analytikLtd
Complex Colony Counting
Back to Index
• Because the VideometerLab uses spectral data to characterise colonies of
interest, it is unique in its price band at being able to read plates with two
or more microorganisms growing on them
© analytikLtd
Complex Colony Counting
Back to Index
• These images show the VideometerLab picking out the ‘blue’ and ‘purple’
colonies respectively. This is a simple demonstration that is visually
obvious, but the VideometerLab could be used to distinguish far finer
detail (for example colonies that only differ in their UV absorption)
© analytikLtd
Complex Colony Counting
Back to Index
• The RGB image is in the middle, and the left and right are masks created
by the VideometerLab showing only those colonies it thinks are ‘blue’ on
the left and ‘purple’ on the right
© analytikLtd
• sRGB images of skin, little difference
Skin Sensitisation
Back to Index
Before: No plaster
After: Apply plaster
ten times
© analytikLtd
• nCDA mode, difference is great
Skin Sensitisation
Back to Index
Before: No plaster
After: Apply plaster
ten times
© analytikLtd
Skin Sensitisation
Back to Index
• Allergen testing
© analytikLtd
Skin Sensitisation
Back to Index
© analytikLtd
Skin Sensitisation
Back to Index
© analytikLtd
Skin Sensitisation
Back to Index
• Increasing the contrast shows the irritation of JB Right

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Multispectral imaging for Bioscience with VideometerLab 3

  • 1. © analytikLtd analytikLtd VideometerLab 3 Multi-Spectral Imaging Rapid Non-destructive Surface Analysis Adrian Waltho, Analytik Ltd (Cambridge, UK) adrian.waltho@analytik.co.uk www.analytik.co.uk/multispectral-imaging • Light reflectance at separate colours • Statistical image processing • Chemical, physical and spatial properties • Differentiate | Quantify | Report
  • 2. © analytikLtd Traditional colour imaging uses three broad bands of colour: Red, Green and Blue Normal Colour Imaging
  • 3. © analytikLtd Normal Colour Imaging • RGB photographs have limited spectral resolution • Chlorophyll a and b give almost the same RGB signal and are not spectrally separated Chloro-a High Low High Chloro-b High Low High
  • 4. © analytikLtd Multispectral Imaging Chloro-a High Low Low High Chloro-b Med High Med Low • Using just 4 wavelength bands with tightly defined ranges, Chlorophyll a and b can easily be distinguished • VideometerLab 3 uses 19 wavelength bands
  • 5. © analytikLtd Multispectral Imaging • Many images obtained at selective wavelength bands • Each image pixel contains spectral data points • Spectral signature reveals chemo-specific information • See spatial location of surface chemical variation Ultraviolet Near-Infrared Infra-Red Red Yellow Green Blue Ultra-Violet
  • 6. © analytikLtd VideometerLab 3 Schematic • Narrowband illumination by 19 LEDs at points between 375nm- 970nm (UV-Vis-VNIR), strobing sequentially with precise time control for known light output • Integrating sphere diffuses light onto sample from all angles • 5 mega-pixel monochrome CCD camera captures % reflectance at each LED wavelength for each image pixel, NIST calibration • Optional Emission filter wheel for fluorescence detection and Bright-field or Dark-field back lighting Camera LEDs Integrating sphere Emission filter wheel Sample
  • 7. © analytikLtd VideometerLab 3 Schematic • Precise control at each separate point of the 375-970nm spectrum, only possible with LEDs, allows optimal illumination for best signal to noise • Provides calibrated data, suitable for statistical analysis and manipulation for discovery • Emission filters allow additional multispectral fluorescence imaging, with excitation at each LED wavelength • Powerful, user-friendly hardware setup and image analysis software is central to the system Camera LEDs Integrating sphere Emission filter wheel Sample
  • 9. © analytikLtd Simple Colony Counting Back to Index • The VideometerLab can be used as a simple visualisation aid – identify the strain of microorganism you are interested in and the VideometerLab will highlight all areas with a similar spectrum
  • 10. © analytikLtd Simple Colony Counting Back to Index • By producing a binary image, the VideometerLab can count and quantify those colonies
  • 11. © analytikLtd Simple Colony Counting Back to Index • VideometerLab has labeled each colony and generated size data in mm2 for each one
  • 12. © analytikLtd Complex Colony Counting Back to Index • Because the VideometerLab uses spectral data to characterise colonies of interest, it is unique in its price band at being able to read plates with two or more microorganisms growing on them
  • 13. © analytikLtd Complex Colony Counting Back to Index • These images show the VideometerLab picking out the ‘blue’ and ‘purple’ colonies respectively. This is a simple demonstration that is visually obvious, but the VideometerLab could be used to distinguish far finer detail (for example colonies that only differ in their UV absorption)
  • 14. © analytikLtd Complex Colony Counting Back to Index • The RGB image is in the middle, and the left and right are masks created by the VideometerLab showing only those colonies it thinks are ‘blue’ on the left and ‘purple’ on the right
  • 15. © analytikLtd • sRGB images of skin, little difference Skin Sensitisation Back to Index Before: No plaster After: Apply plaster ten times
  • 16. © analytikLtd • nCDA mode, difference is great Skin Sensitisation Back to Index Before: No plaster After: Apply plaster ten times
  • 17. © analytikLtd Skin Sensitisation Back to Index • Allergen testing
  • 20. © analytikLtd Skin Sensitisation Back to Index • Increasing the contrast shows the irritation of JB Right