More Related Content Similar to Multispectral imaging for Bioscience with VideometerLab 3 (20) Multispectral imaging for Bioscience with VideometerLab 31. © analytikLtd
analytikLtd
VideometerLab 3 Multi-Spectral Imaging
Rapid Non-destructive Surface Analysis
Adrian Waltho, Analytik Ltd (Cambridge, UK)
adrian.waltho@analytik.co.uk
www.analytik.co.uk/multispectral-imaging
• Light reflectance at separate colours
• Statistical image processing
• Chemical, physical and spatial properties
• Differentiate | Quantify | Report
3. © analytikLtd
Normal Colour Imaging
• RGB photographs have
limited spectral resolution
• Chlorophyll a and b give
almost the same RGB
signal and are not
spectrally separated
Chloro-a High Low High
Chloro-b High Low High
4. © analytikLtd
Multispectral Imaging
Chloro-a High Low Low High
Chloro-b Med High Med Low
• Using just 4 wavelength
bands with tightly defined
ranges, Chlorophyll a and b
can easily be distinguished
• VideometerLab 3 uses 19
wavelength bands
5. © analytikLtd
Multispectral Imaging
• Many images obtained at
selective wavelength bands
• Each image pixel contains
spectral data points
• Spectral signature reveals
chemo-specific information
• See spatial location of
surface chemical variation
Ultraviolet Near-Infrared
Infra-Red
Red
Yellow
Green
Blue
Ultra-Violet
6. © analytikLtd
VideometerLab 3 Schematic
• Narrowband illumination by 19
LEDs at points between 375nm-
970nm (UV-Vis-VNIR), strobing
sequentially with precise time
control for known light output
• Integrating sphere diffuses light
onto sample from all angles
• 5 mega-pixel monochrome CCD
camera captures % reflectance
at each LED wavelength for each
image pixel, NIST calibration
• Optional Emission filter wheel
for fluorescence detection and
Bright-field or Dark-field back
lighting
Camera
LEDs
Integrating
sphere
Emission
filter
wheel
Sample
7. © analytikLtd
VideometerLab 3 Schematic
• Precise control at each separate
point of the 375-970nm
spectrum, only possible with
LEDs, allows optimal illumination
for best signal to noise
• Provides calibrated data, suitable
for statistical analysis and
manipulation for discovery
• Emission filters allow additional
multispectral fluorescence
imaging, with excitation at each
LED wavelength
• Powerful, user-friendly hardware
setup and image analysis
software is central to the system
Camera
LEDs
Integrating
sphere
Emission
filter
wheel
Sample
9. © analytikLtd
Simple Colony Counting
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• The VideometerLab can be used as a simple visualisation aid – identify
the strain of microorganism you are interested in and the
VideometerLab will highlight all areas with a similar spectrum
10. © analytikLtd
Simple Colony Counting
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• By producing a binary image, the VideometerLab
can count and quantify those colonies
11. © analytikLtd
Simple Colony Counting
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• VideometerLab has labeled each colony and
generated size data in mm2 for each one
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Complex Colony Counting
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• Because the VideometerLab uses spectral data to characterise colonies of
interest, it is unique in its price band at being able to read plates with two
or more microorganisms growing on them
13. © analytikLtd
Complex Colony Counting
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• These images show the VideometerLab picking out the ‘blue’ and ‘purple’
colonies respectively. This is a simple demonstration that is visually
obvious, but the VideometerLab could be used to distinguish far finer
detail (for example colonies that only differ in their UV absorption)
14. © analytikLtd
Complex Colony Counting
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• The RGB image is in the middle, and the left and right are masks created
by the VideometerLab showing only those colonies it thinks are ‘blue’ on
the left and ‘purple’ on the right
15. © analytikLtd
• sRGB images of skin, little difference
Skin Sensitisation
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Before: No plaster
After: Apply plaster
ten times
16. © analytikLtd
• nCDA mode, difference is great
Skin Sensitisation
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Before: No plaster
After: Apply plaster
ten times