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AGROVOC Linked Open Data and the VocBench, potentials for the community Dr. Johannes Keizer Office ofKnowledge Exchange, Research and Extension Food andAgricultureOrganizationofthe UN Talk atthe US National Agricultural Library,  May 20 2011
We will promote research for food and agriculture, including research to adapt to, and mitigate climate change, and access to research results and technologies at national, regional and international levels.  We will reinvigorate national research systems and will share information and best practices.  We will improve access to knowledge. worldfoodsummit  2009
…Sharing Information 1975 – AGRIS 1980 -  AGROVOC 2000  - Rethinking of AGRIS 2002  - AOS/AGMES 2005  - CIARD 2005 - AIMS
http://aims.fao.org
Todays Talk  What’s new with AGROVOC AGROVOC Linked Open Data The VocBench Why mapping Vocabularies Automatic Indexing AGRIS
AGROVOC
AGROVOC A multilingual agricultural vocabulary organized as concept scheme in 20 languages Covers agriculture, forestry, fisheries and related themes (food security, land use, environment, etc.) Organized in sub-vocabularies, e.g. chemicals, fisheries terms, scientific/common names of organisms Maintained by a global community (e.g. librarians, terminologists, information managers) using VocBench
AGROVOC - Statistics
AGROVOC - Restructuring  Goal: Transform AGROVOC from a traditional thesaurus into a concept scheme with distinction between conceptual level and terminological level Overall revision done by FAO in collaboration with KSI (Knowledge Sharing and Innovation) team at ICRISAT, Hyderabad, India Top concepts reduced from 918 to 25 Around 85,000 term relations revised Non-hierarchical relationships refined by semantic relations Ca. 4,000 non-preferred terms changed to preferred terms
Top concepts
Relationships (examples)
Thesauri  into  the AGROVOC  LOD Cloud   ,[object Object]
2000 inlinksEUROVOC NALT  AGROVOC RAMEAU GEMET  STW   LCSH
AGROVOC LOD-inlinks  Trusted  Links from  AGROVOC
AGROVOC Links after 3 weeks LOD Outlinks: GEMET-AGROVOC 1,198 RAMEAU-AGROVOC  :700 Total Outlinks: 1898 Inlinks: AGROVOC-EUROVOC:1,297 AGROVOC-GEMET:1,198 AGROVOC-LCSH :1,093 AGROVOC-NAL: 13,390 AGROVOC-STW:1136 AGROVOC-RAMEAU:700 Total Inlinks:18,814
Get the NALT into the LOD cloud too! Some notes from Ahsan Issues 1.  Only  problem is that  the online version  and  the SKOS version 2011 of NALT are  totally different according to the terms code .  They need to make the stable version of their terms code .2. Since  the AGROVOC is connected with the  NALT so they are in the LOD according to the principle. They can put our 13,000 mapping links into their SKOS file. It will cover outlinks and inlinks. Necessary activities 1. Put the SKOS version in the triple store.2. Make the dereferenceable URIs in their website (They can use the biotech drupal module that we are going to build now)3. Publish the URIs  by using Pubby  tool      http://www4.wiwiss.fu-berlin.de/pubby/
Europe:(It is better to use this example during the presentation)http://aims.fao.org/aos/agrovoc/c_2724From the Top concept:Ref:  http://aims.fao.org/aos/agrovoc/c_7644Vocbench (Production)Ref:   http://agrovoc.mimos.my/vocbenchv1.1i/VocBench(Sandbox)Ref:http://agrovoc.mimos.my/vocbenchv1.1i/
The VocBench
The VocBench VocBench concepts and entitiestriples
VocBench Features ,[object Object]
Structure independent (i.e. thesauri, Glossaries, etc)
Supports RDF (SKOS, SKOS-XL), OWL
Supports collaborative editing
 Supports editorial workflow, with user roles
 Simple and advanced search
Supports data export: SKOS, Relational format (MySQL) ,[object Object]
Why linking vocabularies?
http://aims.fao.org/aos/agrovoc/c_7825
http://eurovoc.europa.eu/218754 http://aims.fao.org/aos/agrovoc/c_7825
http://eurovoc.europa.eu/218754 http://aims.fao.org/aos/agrovoc/c_7825
http://eurovoc.europa.eu/218754 http://agclass.nal.usda.gov/nalt/2011.xml#1780 http://aims.fao.org/aos/agrovoc/c_7825
Linking data through common URIs TOXIC SUBSTANCES http://www.agnic.org/search/CAT85822953 UNBIS AGROVOC NALT http://aims.fao.org/aos/agrovoc/c_7825 http://agclass.nal.usda.gov/nalt/2011.xml#1780 http://eurovoc.europa.eu/218754 Eurovoc http://agris.fao.org/agris-search/search/display.do?f=1996/TR/TR96001.xml;TR9600026 http://unbisnet.un.org:8080/ipac20/ipac.jsp?session=128F308557F34.283092&profile=bib&uri=full=3100001~!685149~!1&ri=1&aspect=subtab124&menu=search&source=~!horizon http://eur-lex.europa.eu/LexUriServ/LexUriServ.do?uri=OJ:L:2010:202:0011:0015:EN:PDF http://aims.fao.org/aos/agrovoc/c_12332        owl:sameAshttp://eurovoc.europa.eu/219871 skos: exact match                  UNBIS: Toxic Substances
If all institutions, which publish about toxic wastes would: ,[object Object]
(many do – low hanging fruit!)
- Publish their metadata as LOD
(quite easy to do, bibData map well to RDFThen Everyone who knows to write SparqlQeries could get all these publications with one shot for a new website on toxic wastes
Vocabularies and LOD Simply publishing your data as RDF does not link them to other data sets  Creating this links by humans is interesting in detail, but unrealistic as mass processing Linking 2 standard vocabularies can link 200 datasets which use these standard vocabularies
AgroTagger And OpenCalais

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Agrovoc Linked Open Data and the Voc Bench, Potentials for the Community

  • 1. AGROVOC Linked Open Data and the VocBench, potentials for the community Dr. Johannes Keizer Office ofKnowledge Exchange, Research and Extension Food andAgricultureOrganizationofthe UN Talk atthe US National Agricultural Library, May 20 2011
  • 2. We will promote research for food and agriculture, including research to adapt to, and mitigate climate change, and access to research results and technologies at national, regional and international levels. We will reinvigorate national research systems and will share information and best practices. We will improve access to knowledge. worldfoodsummit 2009
  • 3. …Sharing Information 1975 – AGRIS 1980 - AGROVOC 2000 - Rethinking of AGRIS 2002 - AOS/AGMES 2005 - CIARD 2005 - AIMS
  • 5. Todays Talk What’s new with AGROVOC AGROVOC Linked Open Data The VocBench Why mapping Vocabularies Automatic Indexing AGRIS
  • 7. AGROVOC A multilingual agricultural vocabulary organized as concept scheme in 20 languages Covers agriculture, forestry, fisheries and related themes (food security, land use, environment, etc.) Organized in sub-vocabularies, e.g. chemicals, fisheries terms, scientific/common names of organisms Maintained by a global community (e.g. librarians, terminologists, information managers) using VocBench
  • 9. AGROVOC - Restructuring Goal: Transform AGROVOC from a traditional thesaurus into a concept scheme with distinction between conceptual level and terminological level Overall revision done by FAO in collaboration with KSI (Knowledge Sharing and Innovation) team at ICRISAT, Hyderabad, India Top concepts reduced from 918 to 25 Around 85,000 term relations revised Non-hierarchical relationships refined by semantic relations Ca. 4,000 non-preferred terms changed to preferred terms
  • 12.
  • 13.
  • 14. 2000 inlinksEUROVOC NALT AGROVOC RAMEAU GEMET STW LCSH
  • 15.
  • 16.
  • 17.
  • 18. AGROVOC LOD-inlinks Trusted Links from AGROVOC
  • 19. AGROVOC Links after 3 weeks LOD Outlinks: GEMET-AGROVOC 1,198 RAMEAU-AGROVOC  :700 Total Outlinks: 1898 Inlinks: AGROVOC-EUROVOC:1,297 AGROVOC-GEMET:1,198 AGROVOC-LCSH :1,093 AGROVOC-NAL: 13,390 AGROVOC-STW:1136 AGROVOC-RAMEAU:700 Total Inlinks:18,814
  • 20.
  • 21. Get the NALT into the LOD cloud too! Some notes from Ahsan Issues 1.  Only  problem is that  the online version  and  the SKOS version 2011 of NALT are  totally different according to the terms code .  They need to make the stable version of their terms code .2. Since  the AGROVOC is connected with the  NALT so they are in the LOD according to the principle. They can put our 13,000 mapping links into their SKOS file. It will cover outlinks and inlinks. Necessary activities 1. Put the SKOS version in the triple store.2. Make the dereferenceable URIs in their website (They can use the biotech drupal module that we are going to build now)3. Publish the URIs  by using Pubby  tool      http://www4.wiwiss.fu-berlin.de/pubby/
  • 22. Europe:(It is better to use this example during the presentation)http://aims.fao.org/aos/agrovoc/c_2724From the Top concept:Ref:  http://aims.fao.org/aos/agrovoc/c_7644Vocbench (Production)Ref:   http://agrovoc.mimos.my/vocbenchv1.1i/VocBench(Sandbox)Ref:http://agrovoc.mimos.my/vocbenchv1.1i/
  • 24. The VocBench VocBench concepts and entitiestriples
  • 25.
  • 26. Structure independent (i.e. thesauri, Glossaries, etc)
  • 27. Supports RDF (SKOS, SKOS-XL), OWL
  • 29. Supports editorial workflow, with user roles
  • 30. Simple and advanced search
  • 31.
  • 33.
  • 38. Linking data through common URIs TOXIC SUBSTANCES http://www.agnic.org/search/CAT85822953 UNBIS AGROVOC NALT http://aims.fao.org/aos/agrovoc/c_7825 http://agclass.nal.usda.gov/nalt/2011.xml#1780 http://eurovoc.europa.eu/218754 Eurovoc http://agris.fao.org/agris-search/search/display.do?f=1996/TR/TR96001.xml;TR9600026 http://unbisnet.un.org:8080/ipac20/ipac.jsp?session=128F308557F34.283092&profile=bib&uri=full=3100001~!685149~!1&ri=1&aspect=subtab124&menu=search&source=~!horizon http://eur-lex.europa.eu/LexUriServ/LexUriServ.do?uri=OJ:L:2010:202:0011:0015:EN:PDF http://aims.fao.org/aos/agrovoc/c_12332 owl:sameAshttp://eurovoc.europa.eu/219871 skos: exact match UNBIS: Toxic Substances
  • 39.
  • 40. (many do – low hanging fruit!)
  • 41. - Publish their metadata as LOD
  • 42. (quite easy to do, bibData map well to RDFThen Everyone who knows to write SparqlQeries could get all these publications with one shot for a new website on toxic wastes
  • 43. Vocabularies and LOD Simply publishing your data as RDF does not link them to other data sets  Creating this links by humans is interesting in detail, but unrealistic as mass processing Linking 2 standard vocabularies can link 200 datasets which use these standard vocabularies
  • 45.
  • 46.
  • 47. Uses Agrovoc as a controlled vocabulary
  • 48. Prototype under testing with excellent results (entire repository of ICARDA indexed)
  • 49. Will produce in future Structured RDF files that can be used to link data like “open Calais”AgroTagger
  • 50.
  • 51.
  • 52.
  • 53. AGRIS
  • 55. AGRIS repositoryData aggregation in the last 5 years 2005-2011
  • 57. Thank You! http://www.ciard.net http://ring.ciard.net http://aims.fao.org http://agris.fao.org

Editor's Notes

  1. Note: we identified outlinks to RAMAEU and GEMET, and they have taken them as inlinks to their own thesaurus.
  2. - All links are checked by a domain expert.
  3. - All links are checked by a domain expert.
  4. Ifresources are marked up withsemanticallydefined and machinereadableconcepts, they can belinked and mashed up preciselyaswehaveseen in the examplefrom the BBC.In thisexamplewe start withan AGRIS record on Hazardouswaste, whichisindexedwith AGROVOC. Alreadynowwe can easily link to material indexedwithEurovoc, hereanexamplefromEuroLex. If the UNBIS thesaurus wouldberestructuredto a conceptscheme and publishedas LOD, related UN documentscouldbeattachedautomaticallyby the machine.
  5. Ifresources are marked up withsemanticallydefined and machinereadableconcepts, they can belinked and mashed up preciselyaswehaveseen in the examplefrom the BBC.In thisexamplewe start withan AGRIS record on Hazardouswaste, whichisindexedwith AGROVOC. Alreadynowwe can easily link to material indexedwithEurovoc, hereanexamplefromEuroLex. If the UNBIS thesaurus wouldberestructuredto a conceptscheme and publishedas LOD, related UN documentscouldbeattachedautomaticallyby the machine.
  6. Ifresources are marked up withsemanticallydefined and machinereadableconcepts, they can belinked and mashed up preciselyaswehaveseen in the examplefrom the BBC.In thisexamplewe start withan AGRIS record on Hazardouswaste, whichisindexedwith AGROVOC. Alreadynowwe can easily link to material indexedwithEurovoc, hereanexamplefromEuroLex. If the UNBIS thesaurus wouldberestructuredto a conceptscheme and publishedas LOD, related UN documentscouldbeattachedautomaticallyby the machine.
  7. Ifresources are marked up withsemanticallydefined and machinereadableconcepts, they can belinked and mashed up preciselyaswehaveseen in the examplefrom the BBC.In thisexamplewe start withan AGRIS record on Hazardouswaste, whichisindexedwith AGROVOC. Alreadynowwe can easily link to material indexedwithEurovoc, hereanexamplefromEuroLex. If the UNBIS thesaurus wouldberestructuredto a conceptscheme and publishedas LOD, related UN documentscouldbeattachedautomaticallyby the machine.
  8. How does this work: A resource is connected with each concept URI in the web. The concepts between three vocabularies are having same literal which is connected with owl:sameAS/exactMatch relationship. As we are speakingaboutthesauri and notontologieswekept the relation tobechosenpurposelyvague. The conceptscouldbematchedwithowl:sameAS or the termscouldbematcheswith SKOS:exactMatch. A lotofdiscussion on thisisongoing
  9. Oneof the groundbreakingenterprises in this area isThomsonReuters “Open Calais”. Thisis a webservicethatprovidessemanticmark up foranyunstructured text thatyoufeedintotheir service The service is free ofCharge. Why? I will show youlater.
  10. My team in collaborationwith the IndianInstituteofTechnology in Kanpur isdeveloping a similar service foroursubject area.
  11. Wehavehere a text from 1964 without a bibliographic record at handabout a plantprotectionissue
  12. Open Calais isverygood in thoseareas, in whichtheyhavetheirownelaboratedconceptschemeagainstwhich the texts are analyzed: “Places”, “Persons”, “Business Processes” , “IndustryTerms”, butitisweak in the specifictopicanalysis, whattheycall “social tags”
  13. AgroTaggerstilllacksmanyof the sophisticated featuresof “Open Calais” ,butismuch, muchbetter in the subjectanalysisof the text
  14. The chart represent the records published from the AGRIS partner institutions of the relevant Country (Scielo is the exception being a service provider itself)The citation column is the number of references of articles from scientific journals.