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What role can publishers play
in the open data ecosystem?
Varsha Khodiyar, PhD
NIH workshop: Enabling Data Re-use
11th February 2020
IllustrationinspiredbytheworkofChienShiungWu
1
Enabling data reuse / 11th Feb 2020
Why share research data?
2
Enabling data reuse / 11th Feb 2020
Understanding researcher perspectives on data sharing
1. Practical Challenges for researchers in data sharing. figshare. https://doi.org/10.6084/m9.figshare.5975011.v1
2. The State of Open Data Report 2018. figshare. https://doi.org/10.6084/m9.figshare.7195058.v2
3. Challenges and Opportunities for Data Sharing in China. (2019). https://doi.org/10.6084/m9.figshare.7718441.v1
4. Challenges and Opportunities for Data Sharing in Japan https://doi.org/10.6084/m9.figshare.7999451.v1
5. The State of Open Data 2019. figshare https://doi.org/10.6084/m9.figshare.9980783.v2
3
Enabling data reuse / 11th Feb 2020
Reported motivations for sharing data
from The State of Open Data 2019 and 2018 surveys
Which circumstances would motivate you to share your data?
0% 10% 20% 30% 40% 50% 60% 70%
Increased impact and visibility of my research
Public benefit
Getting proper credit for sharing data
Journal/publisher requirement
Transparency and re-use
Funder requirement
Institution/organisation requirement
Trust the person requesting my data
It was made easy and simple to do so
Freedom of information request
It was a field/industry expectation
Other (please specify)
I would never share my data
2018
2019
4
Enabling data reuse / 11th Feb 2020
4
RESEARCH SOLUTIONS
Credit and visibility for data
5
Enabling data reuse / 11th Feb 2020
Credit with data focused publications
www.nature.com/scientificdata
https://bmcresnotes.biomedcentral.com
Data Descriptor
Data peer review
Sound science
Emphasis on enabling
data reuse
Data Note
Short format
Sound science
Emphasise on data
sharing
6
Enabling data reuse / 11th Feb 2020
Increasing visibility of data
Linking papers to their supporting data in
a repository associated with an average
25% increase in citations
Preprint: arxiv.org/abs/1907.02565
7
Enabling data reuse / 11th Feb 2020
Reported concerns about sharing data
0% 5% 10% 15% 20% 25% 30%
I have no desire to share my data
Other
Others may not be able to repeat my findings
Others may find errors
Data are too small or unimportant
No concerns about sharing data
Data are too large to share
Another lab may make a different interpretation of my data
Not know what repository to use
Contain sensitive information
Lack of time to deposit data
Organising data in a presentable and useful way
Unsure I have the rights to share
Costs of sharing data
Not receiving appropriate credit or acknowledgement
Unsure about copyright and licensing
Concerns about misuse of data
2019
2018
from The State of Open Data 2019 and 2018 surveys
What problems/concerns do you have with sharing datasets?
8
Enabling data reuse / 11th Feb 2020
8
RESEARCH SOLUTIONS
Practical advice, help and training
9
Enabling data reuse / 11th Feb 2020
Advice and guidance
ā€¢ Research Data Helpdesk researchdata@springernature.com
ā€¢ Run by members of the Springer Nature Data Publishing team
ā€¢ Expertise in data curation and management, archiving and digital
preservation, copyright and licensing, Open Access publishing
ā€¢ Guidance on writing data availability statements
ā€¢ Contextual examples from all disciplines
ā€¢ Recommended repositories list
ā€¢ More than 100 repositories; transparent criteria for approval
ā€¢ Supports community/discipline-specific repositories
10
Enabling data reuse / 11th Feb 2020
https://partnerships.nature.com/product/nature-research-academies-research-data-workshops/
Developing researchersā€™ data sharing skills
11
Enabling data reuse / 11th Feb 2020
To help researchers and journals follow good practice in sharing and archiving
of research data, we now offer optional data deposition and curation services
for any journal in any discipline.
Research Data Support service
Researchers
submit their
data files
securely
The Research
Data team
curates the data
and metadata
The data are
published and
linked to the
authorā€™s paper
More information is available on our website
https://go.nature.com/ResearchDataServices
12
Enabling data reuse / 11th Feb 2020
Addition of missing information
Error correction
Suggestions
to increase
FAIRness
Improvements to manuscript tables, text or figures to aid
understanding and reuse of the work
Data access or data license conditions updated at repository or
manuscript to aid accessibility
Repository metadata improved to aid dataset discoverability
Improvements to file names and/or file structure at the repository
to aid understanding and reuse of the work
Possible outcomes of curation
Manuscript
text
Manuscript
figure
Manuscript
table
Data files at
the repository
13
Enabling data reuse / 11th Feb 2020
13
When researchers share their data in a
reusable way we seeā€¦
14
Enabling data reuse / 11th Feb 2020
According to CrossREF,
cited 130 times.
(February 2020)
Data reuse and citation by researchers
15
Enabling data reuse / 11th Feb 2020
Data reuse by (some of) the same researchers
15
16
Enabling data reuse / 11th Feb 2020
Data reuse by other researchers in the same field
The data paper made it easier
to use the data, for me it was
critical that everything was
thereā€¦all the technical details
like voxel size.
Prof. Daniele Marinazzo
17
Enabling data reuse / 11th Feb 2020
Data reuse by the non-research community
http://www.nytimes.com/interactive/2014/12/30/science/history-of-ebola-in-24-outbreaks.html
18
Enabling data reuse / 11th Feb 2020
Top motivations for sharing data are credit & visibility, and public
benefit
Top concerns about sharing data are misuse and lack of
knowledge
ļƒ˜ Publishers can facilitate data publications and data linking to
support credit & visibility for data generators
ļƒ˜ Publishers can support ā€˜lack of knowledgeā€™ barriers with advice,
guidance, training and curation support
ļƒ˜ Mitigating concerns about data misuse requires cultural change
ļƒ˜ Data shared in a reusable way ARE reused by a wide range of
stakeholders
Summary
19
Enabling data reuse / 11th Feb 2020
19
The story behind the image
Chien Shiung Wu (1912ā€“1997)
Chien Shiung Wu was a Chinese American experimental
physicist best known for conducting The Wu experiment
that bears her name. This experiment showed that the
conservation of parity was violated by a weak interaction
and it was possible to distinguish between a mirrored
variation of the world and the mirror image of the current
world. This discovery earned Wu the Wolf Prize in Physics
in 1978.
Varsha Khodiyar, PhD
Data Curation Manager, Springer Nature
varsha.khodiyar@nature.com
For more information on Research Data Support and
other data-related activities at Springer Nature:
Email: researchdata@springernature.com
Website: http://go.nature.com/ResearchDataServices
Slide acknowledgements:
Grace Baynes, Rebecca Grant, Mithu Lucraft,
Samuel Winthrop
Thank you

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What role can publishers play in the open data ecosystem?

  • 1. What role can publishers play in the open data ecosystem? Varsha Khodiyar, PhD NIH workshop: Enabling Data Re-use 11th February 2020 IllustrationinspiredbytheworkofChienShiungWu
  • 2. 1 Enabling data reuse / 11th Feb 2020 Why share research data?
  • 3. 2 Enabling data reuse / 11th Feb 2020 Understanding researcher perspectives on data sharing 1. Practical Challenges for researchers in data sharing. figshare. https://doi.org/10.6084/m9.figshare.5975011.v1 2. The State of Open Data Report 2018. figshare. https://doi.org/10.6084/m9.figshare.7195058.v2 3. Challenges and Opportunities for Data Sharing in China. (2019). https://doi.org/10.6084/m9.figshare.7718441.v1 4. Challenges and Opportunities for Data Sharing in Japan https://doi.org/10.6084/m9.figshare.7999451.v1 5. The State of Open Data 2019. figshare https://doi.org/10.6084/m9.figshare.9980783.v2
  • 4. 3 Enabling data reuse / 11th Feb 2020 Reported motivations for sharing data from The State of Open Data 2019 and 2018 surveys Which circumstances would motivate you to share your data? 0% 10% 20% 30% 40% 50% 60% 70% Increased impact and visibility of my research Public benefit Getting proper credit for sharing data Journal/publisher requirement Transparency and re-use Funder requirement Institution/organisation requirement Trust the person requesting my data It was made easy and simple to do so Freedom of information request It was a field/industry expectation Other (please specify) I would never share my data 2018 2019
  • 5. 4 Enabling data reuse / 11th Feb 2020 4 RESEARCH SOLUTIONS Credit and visibility for data
  • 6. 5 Enabling data reuse / 11th Feb 2020 Credit with data focused publications www.nature.com/scientificdata https://bmcresnotes.biomedcentral.com Data Descriptor Data peer review Sound science Emphasis on enabling data reuse Data Note Short format Sound science Emphasise on data sharing
  • 7. 6 Enabling data reuse / 11th Feb 2020 Increasing visibility of data Linking papers to their supporting data in a repository associated with an average 25% increase in citations Preprint: arxiv.org/abs/1907.02565
  • 8. 7 Enabling data reuse / 11th Feb 2020 Reported concerns about sharing data 0% 5% 10% 15% 20% 25% 30% I have no desire to share my data Other Others may not be able to repeat my findings Others may find errors Data are too small or unimportant No concerns about sharing data Data are too large to share Another lab may make a different interpretation of my data Not know what repository to use Contain sensitive information Lack of time to deposit data Organising data in a presentable and useful way Unsure I have the rights to share Costs of sharing data Not receiving appropriate credit or acknowledgement Unsure about copyright and licensing Concerns about misuse of data 2019 2018 from The State of Open Data 2019 and 2018 surveys What problems/concerns do you have with sharing datasets?
  • 9. 8 Enabling data reuse / 11th Feb 2020 8 RESEARCH SOLUTIONS Practical advice, help and training
  • 10. 9 Enabling data reuse / 11th Feb 2020 Advice and guidance ā€¢ Research Data Helpdesk researchdata@springernature.com ā€¢ Run by members of the Springer Nature Data Publishing team ā€¢ Expertise in data curation and management, archiving and digital preservation, copyright and licensing, Open Access publishing ā€¢ Guidance on writing data availability statements ā€¢ Contextual examples from all disciplines ā€¢ Recommended repositories list ā€¢ More than 100 repositories; transparent criteria for approval ā€¢ Supports community/discipline-specific repositories
  • 11. 10 Enabling data reuse / 11th Feb 2020 https://partnerships.nature.com/product/nature-research-academies-research-data-workshops/ Developing researchersā€™ data sharing skills
  • 12. 11 Enabling data reuse / 11th Feb 2020 To help researchers and journals follow good practice in sharing and archiving of research data, we now offer optional data deposition and curation services for any journal in any discipline. Research Data Support service Researchers submit their data files securely The Research Data team curates the data and metadata The data are published and linked to the authorā€™s paper More information is available on our website https://go.nature.com/ResearchDataServices
  • 13. 12 Enabling data reuse / 11th Feb 2020 Addition of missing information Error correction Suggestions to increase FAIRness Improvements to manuscript tables, text or figures to aid understanding and reuse of the work Data access or data license conditions updated at repository or manuscript to aid accessibility Repository metadata improved to aid dataset discoverability Improvements to file names and/or file structure at the repository to aid understanding and reuse of the work Possible outcomes of curation Manuscript text Manuscript figure Manuscript table Data files at the repository
  • 14. 13 Enabling data reuse / 11th Feb 2020 13 When researchers share their data in a reusable way we seeā€¦
  • 15. 14 Enabling data reuse / 11th Feb 2020 According to CrossREF, cited 130 times. (February 2020) Data reuse and citation by researchers
  • 16. 15 Enabling data reuse / 11th Feb 2020 Data reuse by (some of) the same researchers 15
  • 17. 16 Enabling data reuse / 11th Feb 2020 Data reuse by other researchers in the same field The data paper made it easier to use the data, for me it was critical that everything was thereā€¦all the technical details like voxel size. Prof. Daniele Marinazzo
  • 18. 17 Enabling data reuse / 11th Feb 2020 Data reuse by the non-research community http://www.nytimes.com/interactive/2014/12/30/science/history-of-ebola-in-24-outbreaks.html
  • 19. 18 Enabling data reuse / 11th Feb 2020 Top motivations for sharing data are credit & visibility, and public benefit Top concerns about sharing data are misuse and lack of knowledge ļƒ˜ Publishers can facilitate data publications and data linking to support credit & visibility for data generators ļƒ˜ Publishers can support ā€˜lack of knowledgeā€™ barriers with advice, guidance, training and curation support ļƒ˜ Mitigating concerns about data misuse requires cultural change ļƒ˜ Data shared in a reusable way ARE reused by a wide range of stakeholders Summary
  • 20. 19 Enabling data reuse / 11th Feb 2020 19 The story behind the image Chien Shiung Wu (1912ā€“1997) Chien Shiung Wu was a Chinese American experimental physicist best known for conducting The Wu experiment that bears her name. This experiment showed that the conservation of parity was violated by a weak interaction and it was possible to distinguish between a mirrored variation of the world and the mirror image of the current world. This discovery earned Wu the Wolf Prize in Physics in 1978. Varsha Khodiyar, PhD Data Curation Manager, Springer Nature varsha.khodiyar@nature.com For more information on Research Data Support and other data-related activities at Springer Nature: Email: researchdata@springernature.com Website: http://go.nature.com/ResearchDataServices Slide acknowledgements: Grace Baynes, Rebecca Grant, Mithu Lucraft, Samuel Winthrop Thank you