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Ben Busby, Ph.D.
Lead, Bioinformatics Training, NCBI
Chair, Department of Bioinformatics and Data Science, FAES
ben.busby@nih.gov
A Stepwise Approach
8
EDirect (Search API) Cookbook
Another example – Cas9
In-memory RNAseq Pipelines!
In-memory RNAseq Pipelines!
In-memory RNAseq Pipelines!
Examples
• Trinity
• Trans-ABYSS
• Soap denovo-trans
• CLCbio
ncbi-hackathons.github.io
• May 22-24, UC BioFrontiers Institute Boulder CO
• June 19-21, NYGC
• August 17-19, NIH Campus
• September 25-27, Pittsburgh, PA
• October 23-25, Boston, MA
• …
• April 2-4, 2018, UCSC
Come work at NCBI for 4-6 weeks!
Email bioinformatics-training@ncbi.nlm.nih.gov
for more information!

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Isoforms glbio v1

Editor's Notes

  1. Heres where you mention the metadata submission!
  2. Heres where you mention the metadata submission!
  3. Heres where you mention EDirect
  4. Segue to toby bloom point
  5. Now… with AMR data!
  6. Now… with AMR data!
  7. Now… with AMR data!
  8. Now… with AMR data!