Host Cell Proteins
1. What are HCPs?
2. Why are they so important?
3. How to detect and remove these from our Drug substance/ solution?
4. Regulatory requirements to check the limits of HC.
Dhirendra Kumar1, Preety Sinha2, Naresh Chand Sharma3*
1Research Scholar, PG Department of Zoology, A. N. College, Patna, India
2Professor, PG Department of Zoology, A. N. College, Patna, India
3Consultant Bacteriologist, Laboratory Department, Maharishi Valmiki Infectious Diseases Hospital, Delhi, India
*Address for Correspondence: Dr. Naresh Chand Sharma, Consultant Bacteriologist, Laboratory Department,
Maharishi Valmiki Infectious Diseases Hospital, Kingsway Campus, Delhi, India
Received: 17 Sept 2016/Revised: 28 Sept 2016/Accepted: 19 Oct 2016
ABSTRACT- The acute diarrheal disease cholera is caused by Vibrio cholerae, a major public health problem in Asia,
Africa and Latin America. V. cholerae has more than 200 known serotypes but not all the strains are pathogenic. In recent
years, it has been seen that the emergence of new variants of V. cholerae O1 have carried characteristics of both classical
and El Tor biotypes and these variants of V. cholerae O1 are called as ‘atypical El Tor’. These strains might have evolved
from El Tor variants that acquired certain characteristics from classical genome. 30 V. cholerae O1 isolates (Table 1) were
revived from stock cultures maintained at Laboratory Department in Maharishi Valmiki Infectious Diseases Hospital
(MVIDH), Delhi during 2012-2014. Mismatch amplification mutation assay was used for classifying the strains into
prototype El Tor, hybrid, or El Tor variant biotype based on their ctxB gene. All isolates were biochemically identified as
V. cholerae biotype El Tor and serologically O1 Ogawa. All isolates were amplified with classical specific primers.
Cholera continues to be endemic in large number of states in the eastern, western, northern and southern parts of India and
there were 38 cholera outbreak reports published in India during 2007 to 2013. These Indian outbreaks have been
associated with new El Tor variant.
Key-words- V. cholerae O1, El Tor, MAMA PCR, ctxB
This article is aimed at a brief introduction to phage display technology for production of single-domain Abs (dAbs), popularly also called ‘nanobodies’, and then to discuss their diagnostic applications.
Clinical Metagenomics for Rapid Detection of Enteric Pathogens and Characteri...QIAGEN
High-throughput sequencing, combined with high-resolution metagenomic analysis, provides a powerful diagnostic tool for clinical management of enteric disease. Forty-five patient samples of known and unknown disease etiology and 20 samples from health individuals were subjected to next-generation sequencing. Subsequent metagenomic analysis identified all microorganisms (bacteria, viruses, fungi and parasites) in the samples, including the expected pathogens in the samples of known etiology. Multiple pathogens were detected in the individual samples, providing evidence for polymicrobial infection. Patients were clearly differentiated from healthy individuals based on microorganism abundance and diversity. The speed, accuracy and actionable features of CosmosID bioinformatics and curated GenBook® databases, implemented in the QIAGEN Microbial Genomics Pro Suite, and the functional analysis, leveraging the QIAGEN functional metagenomics workflow, provide a powerful tool contributing to the revolution in clinical diagnostics, prophylactics and therapeutics that is now in progress globally.
This poster was presented at the 2015 Georgia Bio Conference in Atlanta, GA.
Abstract:
Alarming trends in the spread of antibiotic resistance among top pathogens, including Staphylococcus aureus, have pushed mankind toward what has been coined as the “post-antibiotic era.” Therefore, an indirect attack on bacteria through interfering with their means of communication, quorum sensing, is proposed. An underappreciated source for modern anti-infectives is natural products from terrestrial plants. A rich history of medical traditions developed under the influence of diverse cultures in the Mediterranean and many of these are still practiced by local people. Investigation of botanical folk medicines used in the treatment of skin and soft tissue infections identified Castanea sativa (European Chestnut) for its potential antibacterial activity.
This work demonstrates the quorum sensing inhibitory activity of oleanene and ursene derivatives from a C. sativa leaf extract against all S. aureus accessory gene regulator (agr) alleles. Multiple layers of evidence for agr blocking activity (IC50 1.56-25 µg mL-1) are reported: toxin outputs, reporter assays, hemolytic activity, cytotoxicity studies, and an in vivo abscess model. The C. sativa extract is neither cytotoxic to human keratinocytes, nor murine skin; it neither inhibits S. aureus growth, nor skin commensal growth. Serial passaging experiments with the extract did not result in the development of resistance. In conclusion, the disruption of quorum sensing in the absence of growth inhibition demonstrated by this natural product derived non-biocidal inhibitor of virulence shows potential for future antibiotic therapies.
Detection and Subtype Identification of Blastocystis Isolates from Wastewater...gon0603
Presented during the 6th Asian-Pacific Organization for Cell Biology (APOCB) International Congress, EDSA Shangri-La, Manila, Philippines, 25 to 28 February 2011
It is becoming increasingly evident that bidirectional signalling exists between the gastrointestinal tract and human brain, often involving the gut microbiota.Insights into this gut-brain crosstalk have revealed a complex communication system that not only ensures the proper maintenance of gastrointestinal homeostasis, but is likely to have multiple effects on motivation, and higher cognitive functions & age related afflictions.
Dhirendra Kumar1, Preety Sinha2, Naresh Chand Sharma3*
1Research Scholar, PG Department of Zoology, A. N. College, Patna, India
2Professor, PG Department of Zoology, A. N. College, Patna, India
3Consultant Bacteriologist, Laboratory Department, Maharishi Valmiki Infectious Diseases Hospital, Delhi, India
*Address for Correspondence: Dr. Naresh Chand Sharma, Consultant Bacteriologist, Laboratory Department,
Maharishi Valmiki Infectious Diseases Hospital, Kingsway Campus, Delhi, India
Received: 17 Sept 2016/Revised: 28 Sept 2016/Accepted: 19 Oct 2016
ABSTRACT- The acute diarrheal disease cholera is caused by Vibrio cholerae, a major public health problem in Asia,
Africa and Latin America. V. cholerae has more than 200 known serotypes but not all the strains are pathogenic. In recent
years, it has been seen that the emergence of new variants of V. cholerae O1 have carried characteristics of both classical
and El Tor biotypes and these variants of V. cholerae O1 are called as ‘atypical El Tor’. These strains might have evolved
from El Tor variants that acquired certain characteristics from classical genome. 30 V. cholerae O1 isolates (Table 1) were
revived from stock cultures maintained at Laboratory Department in Maharishi Valmiki Infectious Diseases Hospital
(MVIDH), Delhi during 2012-2014. Mismatch amplification mutation assay was used for classifying the strains into
prototype El Tor, hybrid, or El Tor variant biotype based on their ctxB gene. All isolates were biochemically identified as
V. cholerae biotype El Tor and serologically O1 Ogawa. All isolates were amplified with classical specific primers.
Cholera continues to be endemic in large number of states in the eastern, western, northern and southern parts of India and
there were 38 cholera outbreak reports published in India during 2007 to 2013. These Indian outbreaks have been
associated with new El Tor variant.
Key-words- V. cholerae O1, El Tor, MAMA PCR, ctxB
This article is aimed at a brief introduction to phage display technology for production of single-domain Abs (dAbs), popularly also called ‘nanobodies’, and then to discuss their diagnostic applications.
Clinical Metagenomics for Rapid Detection of Enteric Pathogens and Characteri...QIAGEN
High-throughput sequencing, combined with high-resolution metagenomic analysis, provides a powerful diagnostic tool for clinical management of enteric disease. Forty-five patient samples of known and unknown disease etiology and 20 samples from health individuals were subjected to next-generation sequencing. Subsequent metagenomic analysis identified all microorganisms (bacteria, viruses, fungi and parasites) in the samples, including the expected pathogens in the samples of known etiology. Multiple pathogens were detected in the individual samples, providing evidence for polymicrobial infection. Patients were clearly differentiated from healthy individuals based on microorganism abundance and diversity. The speed, accuracy and actionable features of CosmosID bioinformatics and curated GenBook® databases, implemented in the QIAGEN Microbial Genomics Pro Suite, and the functional analysis, leveraging the QIAGEN functional metagenomics workflow, provide a powerful tool contributing to the revolution in clinical diagnostics, prophylactics and therapeutics that is now in progress globally.
This poster was presented at the 2015 Georgia Bio Conference in Atlanta, GA.
Abstract:
Alarming trends in the spread of antibiotic resistance among top pathogens, including Staphylococcus aureus, have pushed mankind toward what has been coined as the “post-antibiotic era.” Therefore, an indirect attack on bacteria through interfering with their means of communication, quorum sensing, is proposed. An underappreciated source for modern anti-infectives is natural products from terrestrial plants. A rich history of medical traditions developed under the influence of diverse cultures in the Mediterranean and many of these are still practiced by local people. Investigation of botanical folk medicines used in the treatment of skin and soft tissue infections identified Castanea sativa (European Chestnut) for its potential antibacterial activity.
This work demonstrates the quorum sensing inhibitory activity of oleanene and ursene derivatives from a C. sativa leaf extract against all S. aureus accessory gene regulator (agr) alleles. Multiple layers of evidence for agr blocking activity (IC50 1.56-25 µg mL-1) are reported: toxin outputs, reporter assays, hemolytic activity, cytotoxicity studies, and an in vivo abscess model. The C. sativa extract is neither cytotoxic to human keratinocytes, nor murine skin; it neither inhibits S. aureus growth, nor skin commensal growth. Serial passaging experiments with the extract did not result in the development of resistance. In conclusion, the disruption of quorum sensing in the absence of growth inhibition demonstrated by this natural product derived non-biocidal inhibitor of virulence shows potential for future antibiotic therapies.
Detection and Subtype Identification of Blastocystis Isolates from Wastewater...gon0603
Presented during the 6th Asian-Pacific Organization for Cell Biology (APOCB) International Congress, EDSA Shangri-La, Manila, Philippines, 25 to 28 February 2011
It is becoming increasingly evident that bidirectional signalling exists between the gastrointestinal tract and human brain, often involving the gut microbiota.Insights into this gut-brain crosstalk have revealed a complex communication system that not only ensures the proper maintenance of gastrointestinal homeostasis, but is likely to have multiple effects on motivation, and higher cognitive functions & age related afflictions.
A cell line is a product of immortal cells that are used for biological research.
Cells used for cell lines are immortal, that happens if a cell is cancerous.
The cells can perpetuate division indefinitely which is unlike regular cells which can only divide approximately 50 times.
Human cell lines
MCF-7 breast cancer
HL 60 Leukemia
HEK-293 Human embryonic kidney
HeLa Henrietta lacks
Primate cell lines
Vero African green monkey kidney epithelial cells
Cos-7 African green monkey kidney cells
And others such as CHO from hamster, sf9 & sf21 from insect cells.
MANAGEMENT OF ATRIOVENTRICULAR CONDUCTION BLOCK.pdfJim Jacob Roy
Cardiac conduction defects can occur due to various causes.
Atrioventricular conduction blocks ( AV blocks ) are classified into 3 types.
This document describes the acute management of AV block.
NVBDCP.pptx Nation vector borne disease control programSapna Thakur
NVBDCP was launched in 2003-2004 . Vector-Borne Disease: Disease that results from an infection transmitted to humans and other animals by blood-feeding arthropods, such as mosquitoes, ticks, and fleas. Examples of vector-borne diseases include Dengue fever, West Nile Virus, Lyme disease, and malaria.
These simplified slides by Dr. Sidra Arshad present an overview of the non-respiratory functions of the respiratory tract.
Learning objectives:
1. Enlist the non-respiratory functions of the respiratory tract
2. Briefly explain how these functions are carried out
3. Discuss the significance of dead space
4. Differentiate between minute ventilation and alveolar ventilation
5. Describe the cough and sneeze reflexes
Study Resources:
1. Chapter 39, Guyton and Hall Textbook of Medical Physiology, 14th edition
2. Chapter 34, Ganong’s Review of Medical Physiology, 26th edition
3. Chapter 17, Human Physiology by Lauralee Sherwood, 9th edition
4. Non-respiratory functions of the lungs https://academic.oup.com/bjaed/article/13/3/98/278874
Flu Vaccine Alert in Bangalore Karnatakaaddon Scans
As flu season approaches, health officials in Bangalore, Karnataka, are urging residents to get their flu vaccinations. The seasonal flu, while common, can lead to severe health complications, particularly for vulnerable populations such as young children, the elderly, and those with underlying health conditions.
Dr. Vidisha Kumari, a leading epidemiologist in Bangalore, emphasizes the importance of getting vaccinated. "The flu vaccine is our best defense against the influenza virus. It not only protects individuals but also helps prevent the spread of the virus in our communities," he says.
This year, the flu season is expected to coincide with a potential increase in other respiratory illnesses. The Karnataka Health Department has launched an awareness campaign highlighting the significance of flu vaccinations. They have set up multiple vaccination centers across Bangalore, making it convenient for residents to receive their shots.
To encourage widespread vaccination, the government is also collaborating with local schools, workplaces, and community centers to facilitate vaccination drives. Special attention is being given to ensuring that the vaccine is accessible to all, including marginalized communities who may have limited access to healthcare.
Residents are reminded that the flu vaccine is safe and effective. Common side effects are mild and may include soreness at the injection site, mild fever, or muscle aches. These side effects are generally short-lived and far less severe than the flu itself.
Healthcare providers are also stressing the importance of continuing COVID-19 precautions. Wearing masks, practicing good hand hygiene, and maintaining social distancing are still crucial, especially in crowded places.
Protect yourself and your loved ones by getting vaccinated. Together, we can help keep Bangalore healthy and safe this flu season. For more information on vaccination centers and schedules, residents can visit the Karnataka Health Department’s official website or follow their social media pages.
Stay informed, stay safe, and get your flu shot today!
Ethanol (CH3CH2OH), or beverage alcohol, is a two-carbon alcohol
that is rapidly distributed in the body and brain. Ethanol alters many
neurochemical systems and has rewarding and addictive properties. It
is the oldest recreational drug and likely contributes to more morbidity,
mortality, and public health costs than all illicit drugs combined. The
5th edition of the Diagnostic and Statistical Manual of Mental Disorders
(DSM-5) integrates alcohol abuse and alcohol dependence into a single
disorder called alcohol use disorder (AUD), with mild, moderate,
and severe subclassifications (American Psychiatric Association, 2013).
In the DSM-5, all types of substance abuse and dependence have been
combined into a single substance use disorder (SUD) on a continuum
from mild to severe. A diagnosis of AUD requires that at least two of
the 11 DSM-5 behaviors be present within a 12-month period (mild
AUD: 2–3 criteria; moderate AUD: 4–5 criteria; severe AUD: 6–11 criteria).
The four main behavioral effects of AUD are impaired control over
drinking, negative social consequences, risky use, and altered physiological
effects (tolerance, withdrawal). This chapter presents an overview
of the prevalence and harmful consequences of AUD in the U.S.,
the systemic nature of the disease, neurocircuitry and stages of AUD,
comorbidities, fetal alcohol spectrum disorders, genetic risk factors, and
pharmacotherapies for AUD.
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TEST BANK for Operations Management, 14th Edition by William J. Stevenson, Verified Chapters 1 - 19, Complete Newest Version.pdf
TEST BANK for Operations Management, 14th Edition by William J. Stevenson, Verified Chapters 1 - 19, Complete Newest Version.pdf
- Video recording of this lecture in English language: https://youtu.be/lK81BzxMqdo
- Video recording of this lecture in Arabic language: https://youtu.be/Ve4P0COk9OI
- Link to download the book free: https://nephrotube.blogspot.com/p/nephrotube-nephrology-books.html
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Title: Sense of Taste
Presenter: Dr. Faiza, Assistant Professor of Physiology
Qualifications:
MBBS (Best Graduate, AIMC Lahore)
FCPS Physiology
ICMT, CHPE, DHPE (STMU)
MPH (GC University, Faisalabad)
MBA (Virtual University of Pakistan)
Learning Objectives:
Describe the structure and function of taste buds.
Describe the relationship between the taste threshold and taste index of common substances.
Explain the chemical basis and signal transduction of taste perception for each type of primary taste sensation.
Recognize different abnormalities of taste perception and their causes.
Key Topics:
Significance of Taste Sensation:
Differentiation between pleasant and harmful food
Influence on behavior
Selection of food based on metabolic needs
Receptors of Taste:
Taste buds on the tongue
Influence of sense of smell, texture of food, and pain stimulation (e.g., by pepper)
Primary and Secondary Taste Sensations:
Primary taste sensations: Sweet, Sour, Salty, Bitter, Umami
Chemical basis and signal transduction mechanisms for each taste
Taste Threshold and Index:
Taste threshold values for Sweet (sucrose), Salty (NaCl), Sour (HCl), and Bitter (Quinine)
Taste index relationship: Inversely proportional to taste threshold
Taste Blindness:
Inability to taste certain substances, particularly thiourea compounds
Example: Phenylthiocarbamide
Structure and Function of Taste Buds:
Composition: Epithelial cells, Sustentacular/Supporting cells, Taste cells, Basal cells
Features: Taste pores, Taste hairs/microvilli, and Taste nerve fibers
Location of Taste Buds:
Found in papillae of the tongue (Fungiform, Circumvallate, Foliate)
Also present on the palate, tonsillar pillars, epiglottis, and proximal esophagus
Mechanism of Taste Stimulation:
Interaction of taste substances with receptors on microvilli
Signal transduction pathways for Umami, Sweet, Bitter, Sour, and Salty tastes
Taste Sensitivity and Adaptation:
Decrease in sensitivity with age
Rapid adaptation of taste sensation
Role of Saliva in Taste:
Dissolution of tastants to reach receptors
Washing away the stimulus
Taste Preferences and Aversions:
Mechanisms behind taste preference and aversion
Influence of receptors and neural pathways
Impact of Sensory Nerve Damage:
Degeneration of taste buds if the sensory nerve fiber is cut
Abnormalities of Taste Detection:
Conditions: Ageusia, Hypogeusia, Dysgeusia (parageusia)
Causes: Nerve damage, neurological disorders, infections, poor oral hygiene, adverse drug effects, deficiencies, aging, tobacco use, altered neurotransmitter levels
Neurotransmitters and Taste Threshold:
Effects of serotonin (5-HT) and norepinephrine (NE) on taste sensitivity
Supertasters:
25% of the population with heightened sensitivity to taste, especially bitterness
Increased number of fungiform papillae
2. Passion. Innovation. Life
Host Cell Protein (HCP)
OBJECTIVE
1. What are HCPs
2. Why are they so important
3. How to detect and remove these from our Drug substance/ solution
4. Regulatory requirements to check the limits of HCP
3. Passion. Innovation. Life
Host Cell Protein (HCP)
INTRODUCTION
Process related protein impurities during the manufacturing of biologics.
Endogenous proteins.
(Already exist as components of living cells).
Unique to respective host.
(Specific to the cell line or the host used for example E.coli and CHO cell line).
Closely associated with the host expression system itself.
[For example, E. coli has 4,300 genes (Blattner et al., 1997), whereas mammalian cells such as Chinese Hamster Ovary (CHO) and a commonly used
mouse myeloma cell line (NS0) have about 30,000 genes (Gibbs et al., 2004; Waterston et al., 2002)].
Depend upon the manner in which the biologic of interest is expressed.
[For example, recombinant proteins produced in E. coli may be expressed directly in the cytoplasm or secreted into the periplasm (these can be
engineered to be deposited as inclusion bodies), whereas in mammalian cells it may be secreted into the culture medium].
4. Passion. Innovation. Life
Host Cell Protein (HCP)
WHY DO WE NEED TO DETECT THE HCPS?
HCPs carry potential clinical safety risks in addition to those that might be related to the intended recombinant
protein itself.
[These risks are difficult to evaluate since pre-clinical models (both animal & human) are rarely informative].
These are unwanted.
[The foreign or ‘‘non-self’’ nature of HCP derived from non-human expression systems suggests that almost any individual HCP has the potential to
elicit an immune response in humans, (Janeway et al., 2005)].
Note: Those proteins that are common b/w the species wont be an issue.
Immunogenic effect.
(HCPs contamination can result in adverse toxic or immunological reactions).
To much of it can effect our health.
(The degree of immunogenicity on a long-term basis is practically impossible to determine and thus might be a relatively severe threat to the patient’s
health).
Proteolytic enzymes from the host may effect our product.
5. Passion. Innovation. Life
Host Cell Protein (HCP)
HOW ANTIBODIES ARE GENRATED?
1. Rabbits or goats are most commonly used for generation of these antibodies (anti-HCP Ab).
2. It usually takes several immunizations to reach a maximum immunological response; the process could take 60–90 days
to complete depending on the frequency of immunization.
3. When the titer reaches the maximum, Western blot will be used to test the coverage of HCPs from these antibodies.
4. These will be pooled to develop the ELISAAssay.
6. Passion. Innovation. Life
Host Cell Protein (HCP)
SUPPLIMENTARY TEST TO CHECK HOW GOOD IS OUR ANTIBODY OR THE REAGENT
Western Blotting
1. Western blot is an antibody-dependent detection method (Speicher, 2008).
2. In this method, HCPs are first separated in a polyacrylamide 1 or 2D gel and transferred to a PVDF or
nitrocellulose membrane.
(The primary antibodies raised against HCPs, will be incubated on this membrane).
3. These primary antibodies form complexes with the HCPs on the membrane.
4. These HCP-antibody complex could be detected by labeling the primary antibody with an enzyme like
Horseradish Peroxidase (HRP) (Speicher, 2008) and successive reaction with a substrate that emits certain color
(Blue- TMB Substrate).
12. Passion. Innovation. Life
Host Cell Protein (HCP)
LIMITATIONS
1. During the production process several factors, including:
The genes of the host cell,
The way of product expression, and
The purification steps
Influence the HCP composition and abundance. Therefore, it is difficult to capture each and every type of
HCPs.
2. Several studies report that HCPs often are co-purified along with the product itself by interacting with the
recombinant protein.
3. It is difficult or impossible to design non-clinical or in vitro experiments to demonstrate which HCPs and at
what level may confer risk to humans.
13. Passion. Innovation. Life
Host Cell Protein (HCP)
KIT USED AT ENZENE
• Immunoenzymatic Assay from Cygnus Technologies (Part of Maravai Lifesciences)
For both the measurement of CHO (Catalogue no. F550) and E.coli (Catalogue no. F410) Host Cell
Proteins.
14. Passion. Innovation. Life
Host Cell Protein (HCP)
REGULATORY REQUIREMENT
Range of HCPs in biologic products reviewed by FDA is 1–100 ppm (also mentioned in the ICH Guidelines).
The limits of HCP varies with the route of administration:
1. Subcutaneous (Subcut) (under the skin)
2. Intramuscular (IM) (directly into muscle)
3. Intravenous (IV) (administered into a vein)
4. Intravitreal (medicine into the eye)
15. Passion. Innovation. Life
Host Cell Protein (HCP)
14. REFERENCES
• Host Cell Proteins in Biologics Development: Identification, Quantitation and Risk Assessment (Wang
Wang et al., 2009)