This paper describes a novel flow switch for paper microfluidics based on selective wetting of folded paper actuator strips. The actuator is made entirely of chromatography paper and contains uniquely sized folds. By dropping a small volume of liquid on the crest or trough of a fold, the actuator tip is raised or lowered, allowing it to engage or break fluidic connections between channels. This achieves fast switching within two seconds using only 4 microliters of liquid. Six switch configurations are implemented including single-pole single-throw and single-pole double-throw. An autonomous colorimetric assay is built to detect three analytes in artificial saliva using six parallel actuators activated by two delay strips.
We developed an open microfluidic system to dispense and manipulate discrete droplets on planar plastic sheets. Here, a superhydrophobic material is spray-coated on commercially-available plastic sheets followed by the printing of hydrophilic symbols using an inkjet printer. The patterned plastic sheets are taped to a two-axis tilting platform, powered by stepper motors, that provides mechanical agitation for droplet transport. We demonstrate the following droplet operations: transport of droplets of different sizes, parallel transport of multiple droplets, merging and mixing of multiple droplets, dispensing of smaller droplets from a large droplet or a fluid reservoir, and one-directional transport of droplets. As a proof-of-concept, a colorimetric assay is implemented to measure the glucose concentration in sheep serum. Compared to silicon-based digital microfluidic devices, we believe that the presented system is appealing for various biological experiments because of the ease of altering design layouts of hydrophilic symbols, relatively faster turnaround time in printing plastic sheets, larger area to accommodate more tests, and lower operational costs by using off-the-shelf products.
Launching digital biology, 12 May 2015, Bremenbioflux
Intro. It is not a secret that in biology laboratories hours of manual work are considered a compulsory part of the experiment. During a day of work, lab researchers have to pipette the right amounts of fluids in tubes, carry them from one machine to another, program and handle each machine individually, label and document carefully each step and then convert the results to data and analyse it. For a simple routine experiment, each of the mentioned tasks is performed at least 10 times/day. Past decade, a big effort has been done to produce machines (e.g., pipetting robots) that would automate some of the tasks in the lab. However, these machines were developed under the industrial mindset to maximize the throughput of a single task. Thus, these machines are of large size, task-specific, difficult to use (they usually come with dedicated drivers and software) and most importantly, extremely expensive. A solution is the use of digital microfluidics to enable the advance from automated biology to digital biology. In my vision, a digital lab should be:
• fully integrated, running all the tasks on the same machine
• easy to use, with a web-based software for biological design of new experiments and hardware control
• general-purpose, allowing easy reconfiguration and design of new experiments
• cheap, offering open-source and do-it-yourself assembly kits
Talk. In the talk, I will present an overview of the road to digital biology, covering all the main aspects, from computer-aided design to hardware production and biological applications.
Hands on. Also, prepare for some real engineering action :). I will execute live a biochemical application (enzymatic reaction of β-galactosidase with Xgal) on my homemade digital biochip. We will then discuss the current challenges in the development process and everyone will get a chance to play with the device. And of course, I will happily consider any engineering advice or idea you have :).
We present a micro fluidic device that allows rapid and defined delivery of discrete and homogeneous reagents or samples to allow kinetic studies of surface-tethered biomolecules. We developed an Electro Osmotic Flow (EOF) based device consisting of an asymmetric Y-junction with an incorporated fast, pressure driven valve, two embedded measurement electrodes and reservoirs. The EOF is used to circumvent kinetic limitations on reagent transport to the surface of these tethered biomolecules due to the slow diffusion across parabolic concentration gradients in conventional pressure-driven flow devices. Using Fluorescein isothiocyanate (FITC) as the pH sensitive surface-immobilized biomolecules, we show that the reagent solution can be repeatedly exchanged within milliseconds, and that by using a synchronized triggering scheme we can monitor the reaction of our sensor biomolecules to the change of the environment on a time scale of 10ms.
We developed an open microfluidic system to dispense and manipulate discrete droplets on planar plastic sheets. Here, a superhydrophobic material is spray-coated on commercially-available plastic sheets followed by the printing of hydrophilic symbols using an inkjet printer. The patterned plastic sheets are taped to a two-axis tilting platform, powered by stepper motors, that provides mechanical agitation for droplet transport. We demonstrate the following droplet operations: transport of droplets of different sizes, parallel transport of multiple droplets, merging and mixing of multiple droplets, dispensing of smaller droplets from a large droplet or a fluid reservoir, and one-directional transport of droplets. As a proof-of-concept, a colorimetric assay is implemented to measure the glucose concentration in sheep serum. Compared to silicon-based digital microfluidic devices, we believe that the presented system is appealing for various biological experiments because of the ease of altering design layouts of hydrophilic symbols, relatively faster turnaround time in printing plastic sheets, larger area to accommodate more tests, and lower operational costs by using off-the-shelf products.
Launching digital biology, 12 May 2015, Bremenbioflux
Intro. It is not a secret that in biology laboratories hours of manual work are considered a compulsory part of the experiment. During a day of work, lab researchers have to pipette the right amounts of fluids in tubes, carry them from one machine to another, program and handle each machine individually, label and document carefully each step and then convert the results to data and analyse it. For a simple routine experiment, each of the mentioned tasks is performed at least 10 times/day. Past decade, a big effort has been done to produce machines (e.g., pipetting robots) that would automate some of the tasks in the lab. However, these machines were developed under the industrial mindset to maximize the throughput of a single task. Thus, these machines are of large size, task-specific, difficult to use (they usually come with dedicated drivers and software) and most importantly, extremely expensive. A solution is the use of digital microfluidics to enable the advance from automated biology to digital biology. In my vision, a digital lab should be:
• fully integrated, running all the tasks on the same machine
• easy to use, with a web-based software for biological design of new experiments and hardware control
• general-purpose, allowing easy reconfiguration and design of new experiments
• cheap, offering open-source and do-it-yourself assembly kits
Talk. In the talk, I will present an overview of the road to digital biology, covering all the main aspects, from computer-aided design to hardware production and biological applications.
Hands on. Also, prepare for some real engineering action :). I will execute live a biochemical application (enzymatic reaction of β-galactosidase with Xgal) on my homemade digital biochip. We will then discuss the current challenges in the development process and everyone will get a chance to play with the device. And of course, I will happily consider any engineering advice or idea you have :).
We present a micro fluidic device that allows rapid and defined delivery of discrete and homogeneous reagents or samples to allow kinetic studies of surface-tethered biomolecules. We developed an Electro Osmotic Flow (EOF) based device consisting of an asymmetric Y-junction with an incorporated fast, pressure driven valve, two embedded measurement electrodes and reservoirs. The EOF is used to circumvent kinetic limitations on reagent transport to the surface of these tethered biomolecules due to the slow diffusion across parabolic concentration gradients in conventional pressure-driven flow devices. Using Fluorescein isothiocyanate (FITC) as the pH sensitive surface-immobilized biomolecules, we show that the reagent solution can be repeatedly exchanged within milliseconds, and that by using a synchronized triggering scheme we can monitor the reaction of our sensor biomolecules to the change of the environment on a time scale of 10ms.
New Technique for Measuring and Controlling the Permeability of Polymeric Mem...Editor IJCATR
Membranes have wide uses in industry and medicine applications. Polymer membranes are important materials because of their high chemical resistance, but they are of weak mechanical resistance against high pressures. Therefore, it was essential to modify a permeability measuring technique free from high pressure application. The current work represented a modification for the permeability measuring technique of membranes, where ionic salt was added with known concentration to water as common solvent and the electrolyte current was measured behind the membrane. The electrolysis current was correlated to the flow rate of water across a polyvinyl alcohol (PVA) membrane. Some other problems were raised such that polarization on electrodes and changes in electrolyte contents during the long time of the slow process. Pulsed potential on electrodes resolved these problems and other associated problems like rush in current and the double layer capacitance effect. An empirical equation was suggested to evaluate the permeability of polymer membranes by this modified method. Easy and accurate measurement of permeability helped authors to change the permeability of PVA membranes by adding copper nano particles in membrane to reduce its permeability, and adding silicone dioxide micro particles to the PVA membranes to increase its permeability. Authors suggested a mechanism for these permeability changes. Scanning electron microscope images for the filled PVA membranes supported the suggested mechanism.
New Technique for Measuring and Controlling the Permeability of Polymeric Mem...Editor IJCATR
Membranes have wide uses in industry and medicine applications. Polymer membranes are important materials
because of their high chemical resistance, but they are of weak mechanical resistance against high pressures. Therefore, it was
essential to modify a permeability measuring technique free from high pressure application. The current work represented a
modification for the permeability measuring technique of membranes, where ionic salt was added with known concentration
to water as common solvent and the electrolyte current was measured behind the membrane. The electrolysis current was
correlated to the flow rate of water across a polyvinyl alcohol (PVA) membrane. Some other problems were raised such that
polarization on electrodes and changes in electrolyte contents during the long time of the slow process. Pulsed potential on
electrodes resolved these problems and other associated problems like rush in current and the double layer capacitance effect.
An empirical equation was suggested to evaluate the permeability of polymer membranes by this modified method. Easy and
accurate measurement of permeability helped authors to change the permeability of PVA membranes by adding copper nano
particles in membrane to reduce its permeability, and adding silicone dioxide micro particles to the PVA membranes to
increase its permeability. Authors suggested a mechanism for these permeability changes. Scanning electron microscope
images for the filled PVA membranes supported the suggested mechanism
On Modeling Water Transport in Polymer Electrolyte Membrane Fuel Cell_Crimson...Crimson_Biostatistics
On Modeling Water Transport in Polymer Electrolyte Membrane Fuel Cell by Ahmed Kaffel* in OABB
There is a great need to predict liquid water saturation in porous layers such as gas diffusion layers (GDL) and micro porous layers (MPL) of polymer electrolyte membrane fuel cells (PEMFCs) as this is a key parameter in flooding occurrence which is a limiting factor of PEM fuel cell performance. Several models have been developed in order to study water distribution and migration in micro porous layers. These models require heavy computational efforts and doubt in their applicability to the gas diffusion layer (GDL). Recently Qin & Hassanizadeh [1] developed a new approach based on the reduced continua model for modeling multiphase flow through a stack of thin porous layers.
For more open access journals in Crimson Publishers please click on link: https://crimsonpublishers.com/
For more articles in open access Biostatistics journals please click on link: https://crimsonpublishers.com/oabb/
System for the determination of the real evapotranspiration of a vegetated su...Toscana Open Research
The invention proposes an intelligent apparatus to be used in open fields or greenhouses for expert irrigation management, ensuring efficient use of the water resource.
International Journal of Engineering Research and Applications (IJERA) is an open access online peer reviewed international journal that publishes research and review articles in the fields of Computer Science, Neural Networks, Electrical Engineering, Software Engineering, Information Technology, Mechanical Engineering, Chemical Engineering, Plastic Engineering, Food Technology, Textile Engineering, Nano Technology & science, Power Electronics, Electronics & Communication Engineering, Computational mathematics, Image processing, Civil Engineering, Structural Engineering, Environmental Engineering, VLSI Testing & Low Power VLSI Design etc.
In this review, we focus on the hardware and software technologies used for the purpose of gastrointestinal tract monitoring in a safe and comfortable manner. We review the FDA guidelines for ingestible wireless telemetric medical devices, and the features incorporated in capsule systems such as microrobotics, closed-loop feedback, physiological sensing, nerve stimulation, sampling and delivery, panoramic imaging and rapid reading software. Both experimental and commercialized capsule systems with their sensors, devices, and circuits are discussed. Furthermore, the advances in biocompatible materials and batteries, edible electronics and alternative energy sources for ingestible capsule systems are presented. The clinical studies are reviewed to examine the safety and effectiveness of capsule procedures and the current challenges and outlook are summarized.
Dylan Miley*, Leonardo Bertoncello Machado*, Calvin Condo, Albert E. Jergens, Kyoung-Jin Yoon, Santosh Pandey, “Video Capsule Endoscopy and Ingestible Electronics: Emerging Trends in Sensors, Circuits, Materials, Telemetry, Optics, and Rapid Reading Software“, Advanced Devices & Instrumentation, (Science Partner Journal), Volume 2021, Article ID 9854040, 2021. https://spj.science.org/doi/10.34133/2021/9854040?permanently=true
https://doi.org/10.34133/2021/9854040
Antimicrobial resistance studies in low-cost microfluidic chipsIowa State University
By utilizing a low-cost engineering tool, we have created a microfluidic platform to study bacteria at the single cell level, allowing us to unlock insights into microbial physiology and genetics that would otherwise not be possible. The platform is composed of 3D devices made of adhesive tapes, an agarose membrane as the resting substrate, a temperature-controlled environmental chamber, and an autofocusing module. With this technology, we have been able to observe Escherichia coli morphological changes during ampicillin exposure and measure the minimum inhibitory concentration of the antibiotic. Additionally, we have been able to use CRISPR interference (CRISPRi) to evaluate gene regulation in a concentration gradient. Overall, our microfluidic platform provides a powerful, low-cost tool to uncover new genetic determinants of antibiotic susceptibility and assess the long-term effectiveness of antibiotics in bacterial cultures.
Adhesive Tape Microfluidics with an Autofocusing Module That Incorporates CRISPR Interference: Applications to Long-Term Bacterial Antibiotic Studies, Taejoon Kong, Nicholas Backes, Upender Kalwa, Christopher Legner, Gregory J. Phillips, and Santosh Pandey, ACS Sensors 2019 4 (10), 2638-2645
https://doi.org/10.1021/acssensors.9b01031
https://pubs.acs.org/doi/full/10.1021/acssensors.9b01031
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New Technique for Measuring and Controlling the Permeability of Polymeric Mem...Editor IJCATR
Membranes have wide uses in industry and medicine applications. Polymer membranes are important materials because of their high chemical resistance, but they are of weak mechanical resistance against high pressures. Therefore, it was essential to modify a permeability measuring technique free from high pressure application. The current work represented a modification for the permeability measuring technique of membranes, where ionic salt was added with known concentration to water as common solvent and the electrolyte current was measured behind the membrane. The electrolysis current was correlated to the flow rate of water across a polyvinyl alcohol (PVA) membrane. Some other problems were raised such that polarization on electrodes and changes in electrolyte contents during the long time of the slow process. Pulsed potential on electrodes resolved these problems and other associated problems like rush in current and the double layer capacitance effect. An empirical equation was suggested to evaluate the permeability of polymer membranes by this modified method. Easy and accurate measurement of permeability helped authors to change the permeability of PVA membranes by adding copper nano particles in membrane to reduce its permeability, and adding silicone dioxide micro particles to the PVA membranes to increase its permeability. Authors suggested a mechanism for these permeability changes. Scanning electron microscope images for the filled PVA membranes supported the suggested mechanism.
New Technique for Measuring and Controlling the Permeability of Polymeric Mem...Editor IJCATR
Membranes have wide uses in industry and medicine applications. Polymer membranes are important materials
because of their high chemical resistance, but they are of weak mechanical resistance against high pressures. Therefore, it was
essential to modify a permeability measuring technique free from high pressure application. The current work represented a
modification for the permeability measuring technique of membranes, where ionic salt was added with known concentration
to water as common solvent and the electrolyte current was measured behind the membrane. The electrolysis current was
correlated to the flow rate of water across a polyvinyl alcohol (PVA) membrane. Some other problems were raised such that
polarization on electrodes and changes in electrolyte contents during the long time of the slow process. Pulsed potential on
electrodes resolved these problems and other associated problems like rush in current and the double layer capacitance effect.
An empirical equation was suggested to evaluate the permeability of polymer membranes by this modified method. Easy and
accurate measurement of permeability helped authors to change the permeability of PVA membranes by adding copper nano
particles in membrane to reduce its permeability, and adding silicone dioxide micro particles to the PVA membranes to
increase its permeability. Authors suggested a mechanism for these permeability changes. Scanning electron microscope
images for the filled PVA membranes supported the suggested mechanism
On Modeling Water Transport in Polymer Electrolyte Membrane Fuel Cell_Crimson...Crimson_Biostatistics
On Modeling Water Transport in Polymer Electrolyte Membrane Fuel Cell by Ahmed Kaffel* in OABB
There is a great need to predict liquid water saturation in porous layers such as gas diffusion layers (GDL) and micro porous layers (MPL) of polymer electrolyte membrane fuel cells (PEMFCs) as this is a key parameter in flooding occurrence which is a limiting factor of PEM fuel cell performance. Several models have been developed in order to study water distribution and migration in micro porous layers. These models require heavy computational efforts and doubt in their applicability to the gas diffusion layer (GDL). Recently Qin & Hassanizadeh [1] developed a new approach based on the reduced continua model for modeling multiphase flow through a stack of thin porous layers.
For more open access journals in Crimson Publishers please click on link: https://crimsonpublishers.com/
For more articles in open access Biostatistics journals please click on link: https://crimsonpublishers.com/oabb/
System for the determination of the real evapotranspiration of a vegetated su...Toscana Open Research
The invention proposes an intelligent apparatus to be used in open fields or greenhouses for expert irrigation management, ensuring efficient use of the water resource.
International Journal of Engineering Research and Applications (IJERA) is an open access online peer reviewed international journal that publishes research and review articles in the fields of Computer Science, Neural Networks, Electrical Engineering, Software Engineering, Information Technology, Mechanical Engineering, Chemical Engineering, Plastic Engineering, Food Technology, Textile Engineering, Nano Technology & science, Power Electronics, Electronics & Communication Engineering, Computational mathematics, Image processing, Civil Engineering, Structural Engineering, Environmental Engineering, VLSI Testing & Low Power VLSI Design etc.
In this review, we focus on the hardware and software technologies used for the purpose of gastrointestinal tract monitoring in a safe and comfortable manner. We review the FDA guidelines for ingestible wireless telemetric medical devices, and the features incorporated in capsule systems such as microrobotics, closed-loop feedback, physiological sensing, nerve stimulation, sampling and delivery, panoramic imaging and rapid reading software. Both experimental and commercialized capsule systems with their sensors, devices, and circuits are discussed. Furthermore, the advances in biocompatible materials and batteries, edible electronics and alternative energy sources for ingestible capsule systems are presented. The clinical studies are reviewed to examine the safety and effectiveness of capsule procedures and the current challenges and outlook are summarized.
Dylan Miley*, Leonardo Bertoncello Machado*, Calvin Condo, Albert E. Jergens, Kyoung-Jin Yoon, Santosh Pandey, “Video Capsule Endoscopy and Ingestible Electronics: Emerging Trends in Sensors, Circuits, Materials, Telemetry, Optics, and Rapid Reading Software“, Advanced Devices & Instrumentation, (Science Partner Journal), Volume 2021, Article ID 9854040, 2021. https://spj.science.org/doi/10.34133/2021/9854040?permanently=true
https://doi.org/10.34133/2021/9854040
Antimicrobial resistance studies in low-cost microfluidic chipsIowa State University
By utilizing a low-cost engineering tool, we have created a microfluidic platform to study bacteria at the single cell level, allowing us to unlock insights into microbial physiology and genetics that would otherwise not be possible. The platform is composed of 3D devices made of adhesive tapes, an agarose membrane as the resting substrate, a temperature-controlled environmental chamber, and an autofocusing module. With this technology, we have been able to observe Escherichia coli morphological changes during ampicillin exposure and measure the minimum inhibitory concentration of the antibiotic. Additionally, we have been able to use CRISPR interference (CRISPRi) to evaluate gene regulation in a concentration gradient. Overall, our microfluidic platform provides a powerful, low-cost tool to uncover new genetic determinants of antibiotic susceptibility and assess the long-term effectiveness of antibiotics in bacterial cultures.
Adhesive Tape Microfluidics with an Autofocusing Module That Incorporates CRISPR Interference: Applications to Long-Term Bacterial Antibiotic Studies, Taejoon Kong, Nicholas Backes, Upender Kalwa, Christopher Legner, Gregory J. Phillips, and Santosh Pandey, ACS Sensors 2019 4 (10), 2638-2645
https://doi.org/10.1021/acssensors.9b01031
https://pubs.acs.org/doi/full/10.1021/acssensors.9b01031
Flexible chip for long-term antimicrobial resistance experimentsIowa State University
By creating a low-cost, three-dimensional microfluidic platform, we have improved our ability to study bacterial cells at the single cell level. This technology allows for prolonged culturing of bacteria in a controlled environment, as well as high resolution observation and imaging of cells. We have used this platform to examine morphological changes in Escherichia coli exposed to ampicillin and to quantify the minimum inhibitory concentration of the antibiotic. Additionally, we demonstrated the potential for precise gene regulation using CRISPR interference (CRISPRi) in a concentration gradient. Ultimately, this engineering tool should be useful for uncovering new genetic factors that influence antibiotic susceptibility and evaluating the long-term effectiveness of antibiotics.
Adhesive Tape Microfluidics with an Autofocusing Module That Incorporates CRISPR Interference: Applications to Long-Term Bacterial Antibiotic Studies, Taejoon Kong, Nicholas Backes, Upender Kalwa, Christopher Legner, Gregory J. Phillips, and Santosh Pandey, ACS Sensors 2019 4 (10), 2638-2645
https://doi.org/10.1021/acssensors.9b01031
https://pubs.acs.org/doi/full/10.1021/acssensors.9b01031
In this paper, we explore the use of microfluidic paper-based analytical devices (PADs) to study the behavior of Caenorhabditis elegans. We show how these devices can be fabricated on paper and plastic substrates, as well as how to load, visualize, and transfer single and multiple nematodes. We also demonstrate the use of anthelmintic drug, levamisole, to perform chemical testing on C. elegans. Furthermore, we provide a custom program that is able to recognize individual worms on the PADs in real-time and extract their locomotion parameters. This combination of PADs and the nematode tracking program creates a low-cost, easy-to-fabricate imaging and screening assay that is superior to standard agarose plates or polymeric microfluidic devices for non-microfluidic, nematode laboratories.
Zach Njus, Taejoon Kong, Upender Kalwa, Christopher Legner, Matthew Weinstein, Shawn Flanigan, Jenifer Saldanha, and Santosh Pandey, "Flexible and disposable paper- and plastic-based gel micropads for nematode handling, imaging, and chemical testing", APL Bioengineering 1, 016102 (2017)
https://doi.org/10.1063/1.5005829
https://aip.scitation.org/doi/10.1063/1.5005829
The resistance of parasites to existing drugs and the availability of better technology platforms has driven the discovery of new drugs. Microfluidic devices have been used to facilitate faster screening of compounds, controlled sampling/sorting of whole animals, and automated behavioral pattern recognition. In most cases, drug effects on small creatures (e.g., Caenorhabditis elegans) are measuredelegant by a single parameter such as worm velocity or stroke frequency. We present a multi-parameter extraction method to characterize modes of paralysis in C. elegans over a longer duration. This was done using a microfluidic device featuring real-time imaging, exposing worms to four anthelmintic drugs at EC75, where 75% of the worm population is affected. We monitored the worms' behavior with metrics such as curls per second, types of paralyzation, mode frequency, and number/duration of active/immobilization periods. Differences were observed in how the worms paralyzed in the various drug environments at equivalent concentrations. This study highlights the importance of assessing drug effects on small animals with multiple parameters, measured at regular intervals over a prolonged period, to accurately detect resistance and adaptability in chemical environments.
Roy Lycke, Archana Parashar, and Santosh Pandey, "Microfluidics-enabled method to identify modes of Caenorhabditis elegans paralysis in four anthelmintics", Biomicrofluidics 7, 064103 (2013).
https://doi.org/10.1063/1.4829777
https://aip.scitation.org/doi/10.1063/1.4829777
Melanoma is a particularly dangerous type of skin cancer and is hard to treat in its later stages. Therefore, early detection is key in reducing mortality rates. In order to assist dermatologists in doing this, computer-aided systems have been designed for desktop computers. However, there is a desire for the development of mobile, at-home diagnostics for melanoma risk assessment. Here, we introduce a smartphone application that captures images and extracts ABCD features to classify skin lesions as either malignant or benign. The algorithms used are adaptive to make the process light and user-friendly, as well as reliable in diagnosis. Images can be taken with the phone's camera or imported from public datasets. The entire process of taking the image, performing preprocessing, segmentation and classification is completed on an Android smartphone in a short time. Our application is evaluated on a dataset of 200 images, and achieved either comparable or better performance metrics than other methods. Additionally, it is easy-to-download and easy-to-navigate for the user, which is important for the widespread use of such diagnostics.
Kalwa, U.; Legner, C.; Kong, T.; Pandey, S. Skin Cancer Diagnostics with an All-Inclusive Smartphone Application. Symmetry 2019, 11, 790. https://doi.org/10.3390/sym11060790
https://www.mdpi.com/2073-8994/11/6/790
A CMOS biosensor with a folded floating-gate is created to detect charged biochemical molecules. It contains a FET, a control-gate and a sensing area. The floating-gate spans the whole device, allowing the sensing area to be placed on top of the FET, resulting in a decrease of the device's total area. The device is sensitive to the polarity and quantity of charged poly amino acids and could be used for electronic recognition of temporal and spatial migration of charges, such as in biological phenomena.
B. Chen, A. Parashar and S. Pandey, "Folded Floating-Gate CMOS Biosensor for the Detection of Charged Biochemical Molecules," IEEE Sensors Journal, vol. 11, no. 11, pp. 2906-2910, Nov. 2011, doi: 10.1109/JSEN.2011.2149514.
https://ieeexplore.ieee.org/document/5762313
We attempt to offer an innovative solution to the issues of long response times, large volumes of actuation fluid, and external control circuitry that have been associated with past approaches in creating switches in paper microfluidics. Our method consists of a device created from chromatography paper and featuring folds which, when selectively wetted with an actuation fluid, will either raise or lower the actuator's tip and thus engage or break the desired fluidic connections. As a result, response time is drastically reduced (2 seconds) and the volume of actuation fluid consumed is extremely small (4 microliters). We have tested this approach with six switch configurations, ranging from single-pole single-throw (normally OFF and normally ON) to single-pole double-throw (with single and double break). We further demonstrate its potential with a colorimetric assay involving six actuators in parallel, which can detect the presence of three analytes (glucose, protein, and nitrite) in artificial saliva. Finally, this work brings in the concept of origami to paper microfluidics, combining multiple-fold geometries for programmable switching of fluidic connections.
"A fast, reconfigurable flow switch for paper
microfluidics based on selective wetting of folded
paper actuator strips",
Lab on Chip, 2017, 17, 3621
The transmembrane proteins known as ion channels play a role in controlling and preserving the ionic concentrations across the cell membrane. Modeling the flux of ions in and out of these channels on an atomic level is essential for understanding several neurological diseases and related pharmaceutical discoveries. Recent experimental research has provided information on the channel's physical structure which can be used to create realistic ion transport models. Different trajectories exist for the ions entering the channel, each having its own probability of occurrence. Variables that measure these trajectories are the translocation and return probabilities, average lifetime, and spectral density of the ion number fluctuations. Theoretical analysis of ion transport has been restricted to low-resolution continuum diffusion-based or kinetic-based models which do not consider important factors that have an effect on ionic conduction. This paper extends previous models by an electro-diffusion model which takes into account the effects of electric fields, energy barriers, and rate-limited association/dissociation of ions with surface charges present inside the channel. Derived from the analytical model are the survival probability and spectral density.
:Analytical Modeling of the Ion Number Fluctuations in Biological Ion Channels"
Journal of Nanoscience and Nanotechnology; Vol. 12, 2489–2495, 2012
Ion Channel Fluctuations in Transmemembrane Proteins within Cell MembranesIowa State University
The transmembrane proteins known as ion channels play a role in controlling and preserving the ionic concentrations across the cell membrane. Modeling the flux of ions in and out of these channels on an atomic level is essential for understanding several neurological diseases and related pharmaceutical discoveries. Recent experimental research has provided information on the channel's physical structure which can be used to create realistic ion transport models. Different trajectories exist for the ions entering the channel, each having its own probability of occurrence. Variables that measure these trajectories are the translocation and return probabilities, average lifetime, and spectral density of the ion number fluctuations. Theoretical analysis of ion transport has been restricted to low-resolution continuum diffusion-based or kinetic-based models which do not consider important factors that have an effect on ionic conduction. This paper extends previous models by an electro-diffusion model which takes into account the effects of electric fields, energy barriers, and rate-limited association/dissociation of ions with surface charges present inside the channel. Derived from the analytical model are the survival probability and spectral density.
This paper presents a remote monitoring tool for the objective measurement of behavioral indicators that can help in assessing the health and welfare of pigs in precision swine production. The multiparameter electronic sensor board can measure posture, gait, vocalization, and external temperature, and has been characterized through laboratory measurements and animal tests. Machine learning algorithms and decision support tools can be implemented to detect animal lameness, lethargy, pain, injury, and distress. The adoption of this technology could lead to more efficient management of farm animals, better targeting of sick animals, lower medical costs, and fewer antibiotics being used. Challenges and a road map for technology adoption are discussed, along with suggestions for future improvements.
Animals 2021, 11(9), 2665; https://doi.org/10.3390/ani11092665
We propose a remote monitoring device for measuring behavioral indicators like posture, gait, vocalization, and external temperature which can help in evaluating the health and welfare of pigs. The multiparameter electronic sensor board was tested in a laboratory and on animals. Machine learning algorithms and decision support tools can be used to detect lameness, lethargy, pain, injury, and distress. The roadmap for technology adoption, potential benefits, and further challenges are discussed. This technology could help in efficient management of farm animals, providing targeted attention to sick animals, saving medical costs, and reducing the use of antibiotics.
"Behavioral Monitoring Tool for Pig Farmers: Ear Tag Sensors,
Machine Intelligence, and Technology Adoption Roadmap",
Animals 2021, 11, 2665.
https://doi.org/10.3390/ani11092665
In this study, two sets of experiments were conducted in order to investigate the impact of static magnetic fields on the growth and ethanol production of Saccharomyces cerevisiae. The first experiment ran for 25 hours with a 2% dextrose loading rate, while the second ran for 30 hours with a 6% dextrose loading rate. The magnetic fields used were homogeneous and non-homogeneous, with strengths of 100 mT and 200 mT, respectively. The results showed that the homogenous magnetic field had no significant effect on cell growth, whilst the non-homogeneous field yielded an increase of approximately 8% in peak ethanol concentration compared to the control.
Deutmeyer, A. , Raman, R. , Murphy, P. and Pandey, S. (2011) Effect of magnetic field on the fermentation kinetics of Saccharomyces cerevisiae. Advances in Bioscience and Biotechnology, 2, 207-213.
doi: 10.4236/abb.2011.24031.
https://www.scirp.org/journal/paperinformation.aspx?paperid=6857
Magnetic field to improve fermentation kinetics for ethanol production Iowa State University
Two experiments were conducted to analyze the influence that magnetic fields have on cell growth and ethanol production during fermentation. The first experiment was conducted for 25 hours at a 2% dextrose loading rate with a homogeneous and non-homogeneous static magnetic field of 100 mT and 200 mT, respectively. The second experiment was conducted for 30 hours at a 6% dextrose loading rate with a non-homogeneous static magnetic field of 200 mT. The results indicated that homogeneous magnetic fields did not have a significant effect on the yeast cell growth. However, the non-homogeneous static magnetic field resulted in about 8% more peak ethanol concentration than the control for the 2% dextrose loading rate.
To evaluate the severity of SCN infections in the field, population densities of nematode eggs must be calculated. A method utilizing OptiPrep as a density gradient medium has been shown to provide more effective separation and recovery of extracted eggs compared to sucrose centrifugation. Furthermore, computerized processes have been established to facilitate the discernment and enumeration of eggs from processed samples. A high-resolution scanner was employed to capture static images of eggs and debris on filter papers, and a deep learning network was trained to distinguish and count the eggs from the debris. Additionally, a lensless imaging setup was established using standard components, and the egg samples were allowed to pass through a microfluidic flow chip created from double-sided adhesive tape. Holographic videos were then recorded of the eggs and debris as they moved through, which were reconstructed and processed by a custom software program to obtain the egg counts. The software programs' efficacy for egg counting was validated using soil samples obtained from two farms, and the results were compared to those obtained through manual counting.
Kalwa U, Legner C, Wlezien E, Tylka G, Pandey S (2019) New methods of removing debris and high-throughput counting of cyst nematode eggs extracted from field soil. PLOS ONE 14(10): e0223386.
https://doi.org/10.1371/journal.pone.0223386
https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0223386
To evaluate the level of infestation of the soybean cyst nematode (SCN), Heterodera glycines, in the field, egg population densities are determined from soil samples. Sucrose centrifugation is a common technique for separating debris from the extracted SCN eggs. We have developed a procedure, however, that employs OptiPrep as a density gradient medium, with improved extraction and recovery of the eggs compared to the sucrose centrifugation technique. Also, we have built computerized methods to automate the identification and counting of the nematode eggs from the processed samples. One approach uses a high-resolution scanner to capture static images of the eggs and debris on filter papers and a deep learning network is trained to detect and count the eggs. The second approach utilizes a lensless imaging setup with off-the-shelf components and the egg samples flow through a microfluidic flowchip. Holographic videos are taken of the passing eggs and debris, which are then reconstructed and processed by a custom software program to calculate egg counts. To evaluate the performance of the software programs, SCN-infested soils were collected from two farms and the results were compared with manual counts.
Kalwa U, Legner C, Wlezien E, Tylka G, Pandey S (2019), New methods of removing debris and high-throughput counting of cyst nematode eggs extracted from field soil. PLOS ONE 14(10): e0223386.
https://doi.org/10.1371/journal.pone.0223386
https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0223386
Effect of Static Magnetic Field on Parasitic Worms in MicroChipsIowa State University
This study uses the model organism, C. elegans, to investigate its sensitivity and response to static magnetic fields. Wild-type C. elegans are put into microfluidic channels and exposed to permanent magnets for five cycles of thirty-second time intervals at field strengths ranging from 5 milli Tesla to 120 milli Tesla. Recorded and analyzed with custom software, the results of the worm's movement - the average velocity, turning and curling percentage - were compared to control experiments. Surprisingly, the results did not show any significant difference, indicating that C. elegans may not be able to sense static magnetic fields at the range of field strengths tested.
Njus, Z. , Feldmann, D. , Brien, R. , Kong, T. , Kalwa, U. and Pandey, S. (2015) Characterizing the Effect of Static Magnetic Fields on C. elegans Using Microfluidics. Advances in Bioscience and Biotechnology, 6, 583-591.
doi: 10.4236/abb.2015.69061.
https://www.scirp.org/journal/paperinformation.aspx?paperid=59434
The integration of physical and chemical sensing mechanisms found in nature has been harnessed to enable the development of wearable devices that can track the biochemical and physiological signals of the human body. Numerous consumer electronics have been developed to measure activity, posture, heart rate, respiration rate, and blood oxygen level. Sweat sampling provides a source of biomarkers that is accessible in a continuous, on-the-go, and non-invasive way, allowing for unique developments in wearable sweat sensing. This review focuses on recent trends in material science, device development, sensing mechanisms, power generation, and data management related to these devices. Additionally, exemplary wearable sweat sensors and commercialization efforts in this area are discussed, with an emphasis on the multifunctional sensing platforms that integrate data from both physical and biochemical sweat sensors.
Recent developments in wearable physical sensors have enabled the development of a number of consumer electronics products which measure parameters related to activity, posture, heart rate, respiration rate, and blood oxygen level. However, progress in the development of wearable chemical sensors has been slower due to the inherent challenges in retrieving and processing bodily fluids. Sweat is a valuable source of biomarkers which can be accessed continuously, on-the-go, and non-invasively. This review provides an overview of recent trends in the area of wearable sweat sensing, looking at topics such as material science, device development, sensing mechanisms, power generation, and data management. Examples of wearable sweat sensors published in recent years, as well as commercialization efforts in this field are also presented. The review highlights the trends in multifunctional sensing platforms which incorporate flexible electronics to integrate data from both physical and biochemical sensors.
This paper explores how the adaptability of Caenorhabditis elegans locomotion behavior can be assessed through a movement-based assay. This assay is set up with a series of sinusoidal microchannels, featuring a fixed wavelength and modulating amplitude. These channels are comparable to the body diameter of the organism, and worms are allowed to travel from the input port to the output port. In regions that closely fit the worms' natural undulations, progress is quick and steady. As the channel amplitude changes along the device, the worm struggles to generate propulsive force, slows down, and eventually is unable to move forward. An array of locomotion parameters (average forward velocity, number and duration of pauses, range of contact angle, and cut-off region) are generated from the recorded videos to measure how the worm moves in the modulated sinusoidal channels. The device is tested on wild-type (N2) and two mutant (lev-8 and unc-38) C. elegans. We suggest that this passive, movement-based assay can be used to differentiate between nematodes with distinct locomotion phenotypes.
"Amplitude-modulated sinusoidal microchannels
for observing adaptability in C. elegans locomotion",
Biomicrofluidics 5, 024112 (2011)
https://doi.org/10.1063/1.3604391
Overview of the fundamental roles in Hydropower generation and the components involved in wider Electrical Engineering.
This paper presents the design and construction of hydroelectric dams from the hydrologist’s survey of the valley before construction, all aspects and involved disciplines, fluid dynamics, structural engineering, generation and mains frequency regulation to the very transmission of power through the network in the United Kingdom.
Author: Robbie Edward Sayers
Collaborators and co editors: Charlie Sims and Connor Healey.
(C) 2024 Robbie E. Sayers
Democratizing Fuzzing at Scale by Abhishek Aryaabh.arya
Presented at NUS: Fuzzing and Software Security Summer School 2024
This keynote talks about the democratization of fuzzing at scale, highlighting the collaboration between open source communities, academia, and industry to advance the field of fuzzing. It delves into the history of fuzzing, the development of scalable fuzzing platforms, and the empowerment of community-driven research. The talk will further discuss recent advancements leveraging AI/ML and offer insights into the future evolution of the fuzzing landscape.
Water scarcity is the lack of fresh water resources to meet the standard water demand. There are two type of water scarcity. One is physical. The other is economic water scarcity.
Final project report on grocery store management system..pdfKamal Acharya
In today’s fast-changing business environment, it’s extremely important to be able to respond to client needs in the most effective and timely manner. If your customers wish to see your business online and have instant access to your products or services.
Online Grocery Store is an e-commerce website, which retails various grocery products. This project allows viewing various products available enables registered users to purchase desired products instantly using Paytm, UPI payment processor (Instant Pay) and also can place order by using Cash on Delivery (Pay Later) option. This project provides an easy access to Administrators and Managers to view orders placed using Pay Later and Instant Pay options.
In order to develop an e-commerce website, a number of Technologies must be studied and understood. These include multi-tiered architecture, server and client-side scripting techniques, implementation technologies, programming language (such as PHP, HTML, CSS, JavaScript) and MySQL relational databases. This is a project with the objective to develop a basic website where a consumer is provided with a shopping cart website and also to know about the technologies used to develop such a website.
This document will discuss each of the underlying technologies to create and implement an e- commerce website.
Forklift Classes Overview by Intella PartsIntella Parts
Discover the different forklift classes and their specific applications. Learn how to choose the right forklift for your needs to ensure safety, efficiency, and compliance in your operations.
For more technical information, visit our website https://intellaparts.com
Saudi Arabia stands as a titan in the global energy landscape, renowned for its abundant oil and gas resources. It's the largest exporter of petroleum and holds some of the world's most significant reserves. Let's delve into the top 10 oil and gas projects shaping Saudi Arabia's energy future in 2024.
Sachpazis:Terzaghi Bearing Capacity Estimation in simple terms with Calculati...Dr.Costas Sachpazis
Terzaghi's soil bearing capacity theory, developed by Karl Terzaghi, is a fundamental principle in geotechnical engineering used to determine the bearing capacity of shallow foundations. This theory provides a method to calculate the ultimate bearing capacity of soil, which is the maximum load per unit area that the soil can support without undergoing shear failure. The Calculation HTML Code included.
Cosmetic shop management system project report.pdfKamal Acharya
Buying new cosmetic products is difficult. It can even be scary for those who have sensitive skin and are prone to skin trouble. The information needed to alleviate this problem is on the back of each product, but it's thought to interpret those ingredient lists unless you have a background in chemistry.
Instead of buying and hoping for the best, we can use data science to help us predict which products may be good fits for us. It includes various function programs to do the above mentioned tasks.
Data file handling has been effectively used in the program.
The automated cosmetic shop management system should deal with the automation of general workflow and administration process of the shop. The main processes of the system focus on customer's request where the system is able to search the most appropriate products and deliver it to the customers. It should help the employees to quickly identify the list of cosmetic product that have reached the minimum quantity and also keep a track of expired date for each cosmetic product. It should help the employees to find the rack number in which the product is placed.It is also Faster and more efficient way.
TECHNICAL TRAINING MANUAL GENERAL FAMILIARIZATION COURSEDuvanRamosGarzon1
AIRCRAFT GENERAL
The Single Aisle is the most advanced family aircraft in service today, with fly-by-wire flight controls.
The A318, A319, A320 and A321 are twin-engine subsonic medium range aircraft.
The family offers a choice of engines