This research proposal aims to develop genetic transformation protocols for Eurycoma longifolia using particle bombardment. The objectives are to transform E. longifolia with therapeutic protein genes, analyze transformants for gene insertion and expression, and facilitate production of therapeutic proteins in medicinal plants. The methodology involves optimizing callus induction, regeneration, and genetic transformation parameters. Preliminary results show E. longifolia and L. pumila have the best callus growth. Upon completing the optimization and verification steps, transgenic E. longifolia expressing the therapeutic protein gene will be produced.
Science and technology of manipulating and improving microbial strains, in order to enhance their metabolic capacities for biotechnological applications, are referred to as strain improvement.
Deals with various methods adapted for the Improvement in Microbial Cell Culture alongwith the procedure and instruments used to carry out the operation through illustrative diagrams
Mutagenesis; A conventional tool for strain improvement in industry Zohaib HUSSAIN
The strain improvement is the process of improvement and manipulation of microbial strains for the icreasment of metabolic level for industrial applications. The yield of microbial enzymes can be increased by using microbe specific medium for fermentation, improving the fermentation process and strain improvement for higher yield of product.
All these things lead to decrease in cost production. Microbe produce product according to its need therefore there is great need for overproduction. There is tremendous contribution of conventional Mutagenesis for strain improvement. Mutagenesis is important tool for the production of mutants which are capable to produce large product i.e. hyperactive.
Strain improvement technique (exam point of view)Sijo A
The development of industrial strains, that can tolerate cultural environment and produces the desired metabolite in large amount from wild type strain is called strain improvement.
The rate of production is controlled by genome of an organism.
Hence the rate of production can be increased by inducing necessory changes in genome of the organism. Hence it is also called genetic improvement of microbial strain.
To handle complex Traits like Yield, different stress we must do modification in DNA molecular breeding techniques help us to do such changes in DNA to archive the Goals.
Plant transformation permits the introduction of the gene of interest for producing novel transgenic plants. "When a gene from one species is moved or relocated to another species by using recombinant DNA technology are called genetically modified organisms. Genetic engineering is one way to modify the plants by selecting for desired traits. Genetically modified organisms have foreign genes derive from not only plant source but also from bacteria, viruses, fungi, insects and animals. Transformation is the introduction and addition of the desired gene in plant for the generation of transgenic plant. Plant transformation is a challenging process for scientists. DNA transfer by artificial methods like DNA transfer through physical method is micro-injection, biolistic or gene gun methods, electroporation, silica carbide, microinjection, lipofection, microinjection. DNA also transfers by chemical methods. In natural method like in biological method, Agrobacterium-mediated transfer, Rhizobium, virus-mediated and planta transformation. Plant transformation involves three phases target gene, Plant tissues, vector for successful transformation. Plant transformation offers a momentous means to gain desire character or trait of interest. Plant transformation technique benefit agriculturalists to grow more crops in less area of land. And give more yield at less cost consumption. Plant transformation technology is familiarizing many crops with our desired characters. This review explains the natural method of plant transformation and benefits of transgenic plant.
DNA construct instability in bacteria used for Agrobacterium mediated plant t...iosrjce
The use of plasmid in the production of genetically modified (GM) crops is highly essential in
research and in commercial production of GM plants. However plasmid instability constitutes a major problem
in the use of recombined microorganisms in the production of GM crops. In this study we evaluated the stability
of p8114 carrying a gene coding for a transcription factor (TFIIIA) driven by Cassava Vein Mosaic Virus
(CsVMV) promoter and an nptII selectable marker driven by 35S promoter in the T-DNA. The plasmid was
amplified in E.coliDH5α strain on Luria Broth (LB)agar supplemented with 100 µg/ml kanamycin. The colonies
were confirmed by Restriction Fragment Length Analysis (RFLA) and by DNA sequencing. The confirmed
colonies were stored as glycerol stock at -80
0C and as DNA extracts in TE buffer at 40C. Agrobacterium strains
LBA4404, EHA 105 and AGL1 were also transformed with DNA from the confirmed colonies. Plasmid stability
was evaluated after 3 months. Sixteen to hundred percent level of instability was observed in E.colicolonies
stored at -80
0C and 50% level of instability in plasmid transformed into Agrobacterium strain LBA4404.
Agrobacterium strain LBA4404 showed a higher level of stability 75% compared to EHA 105 (0%) and AGL1 (50%).
Science and technology of manipulating and improving microbial strains, in order to enhance their metabolic capacities for biotechnological applications, are referred to as strain improvement.
Deals with various methods adapted for the Improvement in Microbial Cell Culture alongwith the procedure and instruments used to carry out the operation through illustrative diagrams
Mutagenesis; A conventional tool for strain improvement in industry Zohaib HUSSAIN
The strain improvement is the process of improvement and manipulation of microbial strains for the icreasment of metabolic level for industrial applications. The yield of microbial enzymes can be increased by using microbe specific medium for fermentation, improving the fermentation process and strain improvement for higher yield of product.
All these things lead to decrease in cost production. Microbe produce product according to its need therefore there is great need for overproduction. There is tremendous contribution of conventional Mutagenesis for strain improvement. Mutagenesis is important tool for the production of mutants which are capable to produce large product i.e. hyperactive.
Strain improvement technique (exam point of view)Sijo A
The development of industrial strains, that can tolerate cultural environment and produces the desired metabolite in large amount from wild type strain is called strain improvement.
The rate of production is controlled by genome of an organism.
Hence the rate of production can be increased by inducing necessory changes in genome of the organism. Hence it is also called genetic improvement of microbial strain.
To handle complex Traits like Yield, different stress we must do modification in DNA molecular breeding techniques help us to do such changes in DNA to archive the Goals.
Plant transformation permits the introduction of the gene of interest for producing novel transgenic plants. "When a gene from one species is moved or relocated to another species by using recombinant DNA technology are called genetically modified organisms. Genetic engineering is one way to modify the plants by selecting for desired traits. Genetically modified organisms have foreign genes derive from not only plant source but also from bacteria, viruses, fungi, insects and animals. Transformation is the introduction and addition of the desired gene in plant for the generation of transgenic plant. Plant transformation is a challenging process for scientists. DNA transfer by artificial methods like DNA transfer through physical method is micro-injection, biolistic or gene gun methods, electroporation, silica carbide, microinjection, lipofection, microinjection. DNA also transfers by chemical methods. In natural method like in biological method, Agrobacterium-mediated transfer, Rhizobium, virus-mediated and planta transformation. Plant transformation involves three phases target gene, Plant tissues, vector for successful transformation. Plant transformation offers a momentous means to gain desire character or trait of interest. Plant transformation technique benefit agriculturalists to grow more crops in less area of land. And give more yield at less cost consumption. Plant transformation technology is familiarizing many crops with our desired characters. This review explains the natural method of plant transformation and benefits of transgenic plant.
DNA construct instability in bacteria used for Agrobacterium mediated plant t...iosrjce
The use of plasmid in the production of genetically modified (GM) crops is highly essential in
research and in commercial production of GM plants. However plasmid instability constitutes a major problem
in the use of recombined microorganisms in the production of GM crops. In this study we evaluated the stability
of p8114 carrying a gene coding for a transcription factor (TFIIIA) driven by Cassava Vein Mosaic Virus
(CsVMV) promoter and an nptII selectable marker driven by 35S promoter in the T-DNA. The plasmid was
amplified in E.coliDH5α strain on Luria Broth (LB)agar supplemented with 100 µg/ml kanamycin. The colonies
were confirmed by Restriction Fragment Length Analysis (RFLA) and by DNA sequencing. The confirmed
colonies were stored as glycerol stock at -80
0C and as DNA extracts in TE buffer at 40C. Agrobacterium strains
LBA4404, EHA 105 and AGL1 were also transformed with DNA from the confirmed colonies. Plasmid stability
was evaluated after 3 months. Sixteen to hundred percent level of instability was observed in E.colicolonies
stored at -80
0C and 50% level of instability in plasmid transformed into Agrobacterium strain LBA4404.
Agrobacterium strain LBA4404 showed a higher level of stability 75% compared to EHA 105 (0%) and AGL1 (50%).
25. comparative study of genetic variations as determined from marker systemsVishwanath Koti
Tomato (Solanum lycopersicum L.) is most important Solanacous vegetable grown worldwide for
its edible fruits. Various marker techniques have been successfully applied, either individually or in
combination to study the genetic diversity of this crop. A Study to assess the usefulness of different
markers system for analyzing the genetic diversity and relation between different varieties and to find out
correlation between marker systems revealed that all tested tomato cultivars could be differentiated from
each other based on either morphological/protein/RAPD markers individually, and can be applied for
grouping of cultivars, pedigree analysis and genetic diversity analysis. However, markers system used in
this study showed variations in understanding the genetic relation between studied varieties.
Efficient, quick and tissue culture independent system for crop plants improvement useful for those plants that lack tissue culture and regeneration system.
Two most common Agrobacterium mediated in-planta methods such as floral dip and vacuum infiltration have been successfully used by many researchers in both dicot and monocot plants.
Main advantages of in-planta transformation are to produce large number of transgenic plants and accumulation of high concentration of total soluble protein in short time.
High-value pleiotropic genes for developing multiple stress-tolerant biofort...PABOLU TEJASREE
Modern agriculture confronts multifaceted challenges, encompassing biotic and abiotic stresses alongside malnutrition. Biofortified crops emerge as a pivotal solution, augmenting nutritional quality during plant growth. By harnessing specific genes with pleiotropic effects for stress tolerance, these crops exhibit heightened yields, resilience against pests and diseases, and adaptability to environmental stressors. This innovation not only secures food safety and nutrition but also fosters the development of "high-value farms," ensuring sustainable escalation in global food productivity and stable food prices.
Conclusion: Integrating diverse transgenes and gene editing with omics approaches enhances stress tolerance and nutritional content in biofortified crops. This holistic strategy enables precise modifications to crop genomes and comprehensive insights into stress responses and nutrient metabolism, ensuring sustainable food production and nutrition security.
Indo-American Journal of Agricultural and Veterinary Sciences .It sounds like the journal you're referring to has a broad scope covering various aspects of Agricultural Sciences and Veterinary Medicine. The topics listed indicate a comprehensive range of fields within these discipline and submitting manuscripts to this journal can explore research and review articles of the journalism research.
The Indo-American Journal of Agricultural and Veterinary Sciences appears to be a scholarly journal focused on publishing research within the fields of agriculture and veterinary sciences of the journals public.
Detection of Genetic variation in tissue culture clones of date palm using IS...IJSRD
Date palm is a plant having high nutritional value and long life (yielding up to 100 years). Phoenix dactylifera requires 2-5 males for pollination of 100 females’ plant depending up on genetic and environment factors. Therefore paternity variation expected to very low according to PCR based techniques, Even though we have tried to find out genetic variation among tissue culture cloned plant. Tissue culture technique can be used for genetic improvement of date palm. The main purpose of this study was to evaluate the genetic variation in the tissue culture clones of date palm by using ISSR primers among mother and it’s two clones. The plant DNA was extracted and subjected to detection of genetic variation in two groups of date palm using ISSR primers. In this study ISSR primers produced monomorphic bands within group-1 and group-2. Genetic variation in tissue culture clones of date palm was not detecte by UBC primer series.
A high frequency microcloning protocol for subsequent cryopreservation in Kae...iosrphr_editor
The IOSR Journal of Pharmacy (IOSRPHR) is an open access online & offline peer reviewed international journal, which publishes innovative research papers, reviews, mini-reviews, short communications and notes dealing with Pharmaceutical Sciences( Pharmaceutical Technology, Pharmaceutics, Biopharmaceutics, Pharmacokinetics, Pharmaceutical/Medicinal Chemistry, Computational Chemistry and Molecular Drug Design, Pharmacognosy & Phytochemistry, Pharmacology, Pharmaceutical Analysis, Pharmacy Practice, Clinical and Hospital Pharmacy, Cell Biology, Genomics and Proteomics, Pharmacogenomics, Bioinformatics and Biotechnology of Pharmaceutical Interest........more details on Aim & Scope).
Allen and Arnon medium produces higher cyanobacteria concentration compared to BG-11 medium. (Berberoglu et al., 2008)
Macroalgae culture requires higher concentration of vitamins than microalgae cultures.
Microalgae cultured on different medium shows no morphological differences.
Artificial and enriched medium have higher concentration than marine environment.
Ammonium concentration higher than 25 µM is toxic to some species.
Medium composition may affect cellular composition specifically lutein and fatty acid (eicosapentaenoic acid) (Seto et al., 1984; Miron et al., 2008)
Effect of oxygen concentration on the growth of Nannochloropsis sp. at low li...Vijendren Krishnan
CO2, nitrogen and phosphate content have been known to influence growth and lipid production
Oxygen may cause deleterious effect to microalgae especially in tubular PBR.
Photorespiration & Photo-inhibition may decrease the microalgae growth
Changes in carbon uptake mechanisms in two green microalgae by reduced seawat...Vijendren Krishnan
Increase in atmospheric CO2 from 280 ppm in pre-industrial time to 386 ppm in present.
Expected to rise to 700 ppm by end of century
Drop of pH by 0.1, at the ocean surface. Predicted to drop 0.3-0.5 by end of century
Current seawater pH 8.0-8.3, HCO3- predominant form of inorganic carbon at 2 mM.
CO2 constitutes less than 1% (20 µM) of total DIC.
Stichococcus cylindricus Butcher et Umbauk and S. minor Naegeli grown at 20oC in ASW buffered with 50 mM MES at pH 5 and 6; 50 mM HEPES at pH 7, 7.5 and 8.2.
Continuous illumination 50 µmol photon m-2s-1
Aeration 28L/h (0.47 L/min)
OD measured every 1-3 d at 730 nm
Salinity study conducted by varying NaCl (25, 50, 100, 200, & 470mM) * Seawater salinity = 599 mM (35 g/L)
Evaluation of the potential of 10 microalgal strains for biodiesel productionVijendren Krishnan
In this study, the potential of 10 algae species for biodiesel production were evaluated by determining their fatty acid profiles, biodiesel properties besides growth rate, biomass concentration and lipid productivity. Among seven strains with high growth and lipid accumulation properties, excluding Kirchneriella lunaris and Lyngbya kuetzingii, five species Selenastrum capricornutum, Chlorella vulgaris, Scenedesmus obliqnus, Phaeodactylum tricornutum and Isochrysis sphacrica were finally selected for biodiesel production due to their possessing higher lipid productivity and favorable biodiesel properties. The best strain was P. tricornutum, with lipid content of 61.43 ± 0.95%, lipid productivity of 26.75 mg L1 d1, the favorable fatty acid profiles of C16–C18 (74.50%), C14:0 (11.68%) and C16:1 (22.34%) as well as suitable biodiesel properties of higher cetane number (55.10), lower iodine number (99.2 gI2/100 g) and relatively low cloud point (4.47 C).
The high content of polyunsaturated fatty acids in Nannochloropsis limnetica ...Vijendren Krishnan
In the eustigmatophycean Nannochloropsis limnetica the content of polyunsaturated fatty acids (PUFA) is extremely high in comparison to different planktonic green algal taxa in freshwater ecosystems. The sums of n-6 and n-3 fatty acids in N. limnetica were ten-fold higher than in the other picoplankton Choricystis minor and Pseudodictyosphaerium jurisii, and higher than in the nanoplanktonic green algae Chlorella vulgaris, Monoraphidium neglectum and Scenedesmus obtusiusculus. The content of fatty acids in N. limnetica was highly variable under different culture conditions. The highest concentrations of PUFA in N. limnetica were found in non-aerated suspension cultures, with a high content of phosphate (40 mg/L K2HPO4) in the culture medium: linoleic acid 22.19 mg/g DW, arachidonic acid 10.52 mg/g DW, and eicosapentaenoic acid 55.56 mg/g DW. N. limnetica represent a high-quality food resource in freshwater food chains. Furthermore, cultures of this eustigmatophycean alga have a high potential for use in biotechnology and aquaculture.
Cancer cell metabolism: special Reference to Lactate PathwayAADYARAJPANDEY1
Normal Cell Metabolism:
Cellular respiration describes the series of steps that cells use to break down sugar and other chemicals to get the energy we need to function.
Energy is stored in the bonds of glucose and when glucose is broken down, much of that energy is released.
Cell utilize energy in the form of ATP.
The first step of respiration is called glycolysis. In a series of steps, glycolysis breaks glucose into two smaller molecules - a chemical called pyruvate. A small amount of ATP is formed during this process.
Most healthy cells continue the breakdown in a second process, called the Kreb's cycle. The Kreb's cycle allows cells to “burn” the pyruvates made in glycolysis to get more ATP.
The last step in the breakdown of glucose is called oxidative phosphorylation (Ox-Phos).
It takes place in specialized cell structures called mitochondria. This process produces a large amount of ATP. Importantly, cells need oxygen to complete oxidative phosphorylation.
If a cell completes only glycolysis, only 2 molecules of ATP are made per glucose. However, if the cell completes the entire respiration process (glycolysis - Kreb's - oxidative phosphorylation), about 36 molecules of ATP are created, giving it much more energy to use.
IN CANCER CELL:
Unlike healthy cells that "burn" the entire molecule of sugar to capture a large amount of energy as ATP, cancer cells are wasteful.
Cancer cells only partially break down sugar molecules. They overuse the first step of respiration, glycolysis. They frequently do not complete the second step, oxidative phosphorylation.
This results in only 2 molecules of ATP per each glucose molecule instead of the 36 or so ATPs healthy cells gain. As a result, cancer cells need to use a lot more sugar molecules to get enough energy to survive.
Unlike healthy cells that "burn" the entire molecule of sugar to capture a large amount of energy as ATP, cancer cells are wasteful.
Cancer cells only partially break down sugar molecules. They overuse the first step of respiration, glycolysis. They frequently do not complete the second step, oxidative phosphorylation.
This results in only 2 molecules of ATP per each glucose molecule instead of the 36 or so ATPs healthy cells gain. As a result, cancer cells need to use a lot more sugar molecules to get enough energy to survive.
introduction to WARBERG PHENOMENA:
WARBURG EFFECT Usually, cancer cells are highly glycolytic (glucose addiction) and take up more glucose than do normal cells from outside.
Otto Heinrich Warburg (; 8 October 1883 – 1 August 1970) In 1931 was awarded the Nobel Prize in Physiology for his "discovery of the nature and mode of action of the respiratory enzyme.
WARNBURG EFFECT : cancer cells under aerobic (well-oxygenated) conditions to metabolize glucose to lactate (aerobic glycolysis) is known as the Warburg effect. Warburg made the observation that tumor slices consume glucose and secrete lactate at a higher rate than normal tissues.
Earliest Galaxies in the JADES Origins Field: Luminosity Function and Cosmic ...Sérgio Sacani
We characterize the earliest galaxy population in the JADES Origins Field (JOF), the deepest
imaging field observed with JWST. We make use of the ancillary Hubble optical images (5 filters
spanning 0.4−0.9µm) and novel JWST images with 14 filters spanning 0.8−5µm, including 7 mediumband filters, and reaching total exposure times of up to 46 hours per filter. We combine all our data
at > 2.3µm to construct an ultradeep image, reaching as deep as ≈ 31.4 AB mag in the stack and
30.3-31.0 AB mag (5σ, r = 0.1” circular aperture) in individual filters. We measure photometric
redshifts and use robust selection criteria to identify a sample of eight galaxy candidates at redshifts
z = 11.5 − 15. These objects show compact half-light radii of R1/2 ∼ 50 − 200pc, stellar masses of
M⋆ ∼ 107−108M⊙, and star-formation rates of SFR ∼ 0.1−1 M⊙ yr−1
. Our search finds no candidates
at 15 < z < 20, placing upper limits at these redshifts. We develop a forward modeling approach to
infer the properties of the evolving luminosity function without binning in redshift or luminosity that
marginalizes over the photometric redshift uncertainty of our candidate galaxies and incorporates the
impact of non-detections. We find a z = 12 luminosity function in good agreement with prior results,
and that the luminosity function normalization and UV luminosity density decline by a factor of ∼ 2.5
from z = 12 to z = 14. We discuss the possible implications of our results in the context of theoretical
models for evolution of the dark matter halo mass function.
Observation of Io’s Resurfacing via Plume Deposition Using Ground-based Adapt...Sérgio Sacani
Since volcanic activity was first discovered on Io from Voyager images in 1979, changes
on Io’s surface have been monitored from both spacecraft and ground-based telescopes.
Here, we present the highest spatial resolution images of Io ever obtained from a groundbased telescope. These images, acquired by the SHARK-VIS instrument on the Large
Binocular Telescope, show evidence of a major resurfacing event on Io’s trailing hemisphere. When compared to the most recent spacecraft images, the SHARK-VIS images
show that a plume deposit from a powerful eruption at Pillan Patera has covered part
of the long-lived Pele plume deposit. Although this type of resurfacing event may be common on Io, few have been detected due to the rarity of spacecraft visits and the previously low spatial resolution available from Earth-based telescopes. The SHARK-VIS instrument ushers in a new era of high resolution imaging of Io’s surface using adaptive
optics at visible wavelengths.
This presentation explores a brief idea about the structural and functional attributes of nucleotides, the structure and function of genetic materials along with the impact of UV rays and pH upon them.
Richard's entangled aventures in wonderlandRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
Seminar of U.V. Spectroscopy by SAMIR PANDASAMIR PANDA
Spectroscopy is a branch of science dealing the study of interaction of electromagnetic radiation with matter.
Ultraviolet-visible spectroscopy refers to absorption spectroscopy or reflect spectroscopy in the UV-VIS spectral region.
Ultraviolet-visible spectroscopy is an analytical method that can measure the amount of light received by the analyte.
Introduction:
RNA interference (RNAi) or Post-Transcriptional Gene Silencing (PTGS) is an important biological process for modulating eukaryotic gene expression.
It is highly conserved process of posttranscriptional gene silencing by which double stranded RNA (dsRNA) causes sequence-specific degradation of mRNA sequences.
dsRNA-induced gene silencing (RNAi) is reported in a wide range of eukaryotes ranging from worms, insects, mammals and plants.
This process mediates resistance to both endogenous parasitic and exogenous pathogenic nucleic acids, and regulates the expression of protein-coding genes.
What are small ncRNAs?
micro RNA (miRNA)
short interfering RNA (siRNA)
Properties of small non-coding RNA:
Involved in silencing mRNA transcripts.
Called “small” because they are usually only about 21-24 nucleotides long.
Synthesized by first cutting up longer precursor sequences (like the 61nt one that Lee discovered).
Silence an mRNA by base pairing with some sequence on the mRNA.
Discovery of siRNA?
The first small RNA:
In 1993 Rosalind Lee (Victor Ambros lab) was studying a non- coding gene in C. elegans, lin-4, that was involved in silencing of another gene, lin-14, at the appropriate time in the
development of the worm C. elegans.
Two small transcripts of lin-4 (22nt and 61nt) were found to be complementary to a sequence in the 3' UTR of lin-14.
Because lin-4 encoded no protein, she deduced that it must be these transcripts that are causing the silencing by RNA-RNA interactions.
Types of RNAi ( non coding RNA)
MiRNA
Length (23-25 nt)
Trans acting
Binds with target MRNA in mismatch
Translation inhibition
Si RNA
Length 21 nt.
Cis acting
Bind with target Mrna in perfect complementary sequence
Piwi-RNA
Length ; 25 to 36 nt.
Expressed in Germ Cells
Regulates trnasposomes activity
MECHANISM OF RNAI:
First the double-stranded RNA teams up with a protein complex named Dicer, which cuts the long RNA into short pieces.
Then another protein complex called RISC (RNA-induced silencing complex) discards one of the two RNA strands.
The RISC-docked, single-stranded RNA then pairs with the homologous mRNA and destroys it.
THE RISC COMPLEX:
RISC is large(>500kD) RNA multi- protein Binding complex which triggers MRNA degradation in response to MRNA
Unwinding of double stranded Si RNA by ATP independent Helicase
Active component of RISC is Ago proteins( ENDONUCLEASE) which cleave target MRNA.
DICER: endonuclease (RNase Family III)
Argonaute: Central Component of the RNA-Induced Silencing Complex (RISC)
One strand of the dsRNA produced by Dicer is retained in the RISC complex in association with Argonaute
ARGONAUTE PROTEIN :
1.PAZ(PIWI/Argonaute/ Zwille)- Recognition of target MRNA
2.PIWI (p-element induced wimpy Testis)- breaks Phosphodiester bond of mRNA.)RNAse H activity.
MiRNA:
The Double-stranded RNAs are naturally produced in eukaryotic cells during development, and they have a key role in regulating gene expression .
Nutraceutical market, scope and growth: Herbal drug technologyLokesh Patil
As consumer awareness of health and wellness rises, the nutraceutical market—which includes goods like functional meals, drinks, and dietary supplements that provide health advantages beyond basic nutrition—is growing significantly. As healthcare expenses rise, the population ages, and people want natural and preventative health solutions more and more, this industry is increasing quickly. Further driving market expansion are product formulation innovations and the use of cutting-edge technology for customized nutrition. With its worldwide reach, the nutraceutical industry is expected to keep growing and provide significant chances for research and investment in a number of categories, including vitamins, minerals, probiotics, and herbal supplements.
THE IMPORTANCE OF MARTIAN ATMOSPHERE SAMPLE RETURN.Sérgio Sacani
The return of a sample of near-surface atmosphere from Mars would facilitate answers to several first-order science questions surrounding the formation and evolution of the planet. One of the important aspects of terrestrial planet formation in general is the role that primary atmospheres played in influencing the chemistry and structure of the planets and their antecedents. Studies of the martian atmosphere can be used to investigate the role of a primary atmosphere in its history. Atmosphere samples would also inform our understanding of the near-surface chemistry of the planet, and ultimately the prospects for life. High-precision isotopic analyses of constituent gases are needed to address these questions, requiring that the analyses are made on returned samples rather than in situ.
3. Introduction
• Genetic transformation in medicinal plant
is a new emerging field for Malaysian
scientist to venture.
• Genetic transformation has led to
production of therapeutic proteins from
plant sources.
• Biopharming Using organism to
produce therapeutic proteins.
3
4. Wide range of valuable proteins such as
vaccines, blood substitutes, enzymes and
hormone can be expressed in plants
Introducing gene in plant using particle
bombardment has become very convincing
and promising.
4
5. Eurycoma longifolia
Kingdom : Plantae
Division : Magnoliophyta
Class : Magnoliopsida
Order : Sapindales
Family : Simaroubaceae
Genus : Eurycoma
Species : E. longifolia
Known to pose anti malaria, anti ulcer, anti
tumor and anti parasitic properties.
Also known for its aphrodisiac properties.
5
(Kuo et al., 2003)
8. 1 cell = 50 – 10000 plastids
1 plastids = ~100 genomes
1 cell = ~5000 – 10000 protein genes
1 plant can produce >250mg of protein
Safflower
Tobacco
Sunflower seed
8
9. Advantages of using plant as
biofactory
Reduced cost compared to current method
Cost effective – sunlight and water is required
for growth.
Medium time scale (months)
Unlimited scale up potential
9
Sunflower
10. Much faster than transgenic animals
Post-translational modification(s)
Safe, no risk of pathogen contamination
Edible crops Oral vaccine
Robust and reliable – high level
of production
10
Corn
(Rigano et al., 2009)
11. Problem Statement
Production of therapeutic protein in
animals, and bacteria are inconvenient
and expensive.
No established protocol for genetic
transformation of E. longifolia
11
12. OBJECTIVES
To develop genetic transformation
protocol for E. longifolia using particle
bombardment system.
To analyze transformants for insertion
and expression of transgenes.
To facilitate the introduction of gene
related to therapeutic protein production
in medicinal plant.
12
14. Screening of Plants
Labisia pumila Kacip fatimah Var alata
Eurycoma longifolia Tongkat ali
Gynura procumbens Sambung nyawa
Centella asiatica Pegaga
Oryza sativa Rice MR219 (M4)
( Control plant)
14
15. The choice of plants for screening are
based on high antioxidative properties
which have been done in our lab.
Same size explant will be cut and
cultured on Murashige and Skoog media
containing different concentration of 2,4-
dichlorophenoxyacetic acid (0 - 25µM).
Cultured explant will be observed every
alternate days.
15
16. Callus selection will be done according to
fast responding, ease of multiplying and
morphology.
L. pumila E. longifolia
16
17. Optimization of culture
media Effect of different concentration of
2,4-D on callus initiation
Explants will be cultured on MS media
with different concentration of 2,4-D;
0 - 25µM.
Callus growth measurement
Fresh weight and dry weight of callus will
be measured each week continuously for 6
weeks.
17
18. Effect of various type of auxin
Suitable auxin for callus growth will be
assessed among 2,4-D, pic, dic and naa by
measuring the fresh and dry weight of
callus in culture respectively.
Effect from combination of auxin
and kinetin
Best auxin from previous experiment will
be used with combination of different
concentration of kinetin; 0- 2.0mg/L. Fresh
and dry weight will be analyzed as for the
parameters.
18
19. Effect from combination of auxin
and cytokinin.
Most suitable auxin with different type of
cytokinin such as zeatin,
benzylaminopurine, and thidiazuron will be
analysed using fresh and dry weight of
callus.
19
20. Optimization of regeneration
media
Pretreatment for callus
Callus will be cultured on MS media with
10µM 2,4-D and sub-cultured to 5µM 2,4-D
then 0µM 2,4-D after 3 weeks respectively.
20
(Dennis et al., 2002)
21. Effect of different concentration of
kinetin
Callus cultured on different concentration of
kinetin; 0 – 2mg/L.
Number of shoots and number of days taken
for shoot initiation will be evaluated as
parameter.
Effect of different type of cytokinin
Best concentration of kin from previous
experiment will be used to evaluate the
performance of callus on BAP, TDZ and zeatin.
21
22. Optimization for gene
transfer
(Heiser et al., 1992)
Optimized parameters will be used to
transfer the therapeutic protein producing
gene into the plant callus.
Parameter Measurement
He Pressure 650,900,1100,1300psi
Target distance 6,9,12cm
Microparticle size 0.6, 1.0, 1.6µM
22
Table 1: Parameters for gene transfer optimization
23. Optimization of gene transfer will be
carried out using GFP and GUS reporter
marker.
He Pressure
Target distance
GFP
GUS
23
Particle Bombardment system
(PDS1000/He)
24. Verification of gene
expression Green fluorescent protein (GFP) and
beta-glucuronidase (GUS)
Pcambia 1304 vector with GFP and GUS
will be used for optimization purpose.
GFP as reporter marker will be observed
under fluorescent microscope equipped
with GFP filter set.
Histochemical GUS staining will be
carried out to visualize blue spots of GUS
using stereo microscope.
(Sreeramanan et al., 2006)
24
25. Reverse Transcriptase polymerase
chain reaction (RT-PCR)
PCR analysis is used to confirm the
integration of the introduced protein
producing gene in the transformed plant.
Molecular weight marker will be used to
ensure the integrated plasmid.
PCR will be carried out using DNA thermal
cycler 480 device.
(Sreeramanan et al., 2006)
25
26. Southern Blot
Southern blot analysis will also be used to
verify the integration and expression of the
introduced gene.
26Figure 1: Southern blotting process
27. Preliminary Result
0
5
10
15
20
25
30
35
40
45
50
0µM 5µM 10µM 15µM 20µM 25µM
L.pumila
E. longifolia
C. asiatica
G. procumbens
O. sativa
Concentration of 2,4 D
Days
27
Figure 2: Study of callus performance.
Results are stated as mean ± sd. N=3
28. Expected Result
By end of this research, transgenic
plant which can express the gene
transferred will be produced and
beneficial for application in humans.
28
29. Gantt chart
2008 2009 2010
Activity Q3 Q4 Q1 Q2 Q3 Q4 Q1 Q2 Q3
Literature review √ √ √ √
Screening of plants √ √
Optimization of
culture media
√ √ √
Optimization of
regeneration media
√ √
Optimization of gene
transfer
√ √
Verification of gene
expression
√ √
Thesis writing √ √
29
30. References
Dennis, T.T., Maseena, E.A., 2006. Callus induction and plant
regeneration in Cardiospermum halicacabum Linn. An important
medicinal plant. Scientia horticulturae. 108: 332-336
Heiser, W., 1992. Optimization of biolistic transformation using the
helium-driven PDS-1000/He system. Bulletin 1688, Bio-Rad
Laboratories, Hercules CA.
Kuo. P.C., Damu. A.G., Lee. K.H., and Wu. T.S., 2004. Cytotoxic and
antimalarial constituents from the roots of Eurycoma longifolia.
Bioorganic and medicinal chemistry. 12: 537-544.
Rigano, M.M., Carmela, M., Anna, G., Alessandro, V., and Teodoro c.,
2009. Plants as biofactories for the production of subunit vaccines against
bio-security related bacteria and viruses. Journal of Vaccine. 01.120
Sreeramanan, S., Maziah, M., Rosli, N.M., Sariah, M., Xavier,R., 2006.
Particle bombardment-mediated co-transformed of chitinase and β-1,3
glucanase genes in banana. Journal of Biotechnology. 5(2): 203-216.
30