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Cyclin Dependent
Kinases
What are CDK’s?
• Cyclin-dependent kinases (CDKs) are protein kinases involved
in critical cellular processes.
• They are important in the regulation and control of cell cycle.
• They are also involved in regulating transcription, mRNA
processing, and the differentiation of nerve cells.
• They are always present in the cells in their inactive form , but
the binding of a cyclin activates it, making it a functional
enzyme and allowing it to modify target proteins.
• CDK’s are the enzymes that phosphorylates specific target
proteins and the attached phosphate group acts like a switch,
making the target protein more or less active.
Checkpoints of cell cycle:
Cyclin and CDK complexes
present in different phases :
Working mechanism:
cyclinE,A
CDK2
P- p27kip1
• Tumor suppressor protein retinoblastoma (Rb) protein holding
transcription factor E2F.
• cyclin_-CDK complex phosphorylate the Rb protein and leads
the release of E2F.
• E2F can then activate transcription of the cyclin E gene. Cyclin
E binds CDK2, and this complex fully phosphorylates Rb,
completing its inactivation. Cyclin E also phosphorylates
p27Kip1, an inhibitor of Cyclin D. Phosphorylation of p27Kip1
tags it for degradation. Degradation of this protein promotes
expression of cyclin A.
• During S phase, Cyclin A ensures that DNA replication only
occurs ONCE per cell cycle by preventing assembly of
excessive replication complexes.
• The Cyclin A-CDK2 complex also regulates DNA replication by
phosphorylating certain DNA replication machinery
components.
• When the cell transition occur to M phase cyclin A gets
replaced with cyclin B.
• Cyclin B is a mitotic cyclin which binds to CDK1 to form the
maturation promoting factor, or mitosis promoting factor . The
concentration of MPF rises until mitosis, until its concentration
falls abruptly due to degradation of Cyclin B. High
concentrations of Cyclin B are necessary for cells to enter M
phase, and low concentrations are needed to exit M phase.
• When DNA damage is their cyclin cdk inhibitors gets activated
i.e. Tumor suppressor proteins like p53,p21,p27kip1 etc.
• P53 activates p21 and binds all cyclin cdk complexes and
activity of Rb proteins get restored and E2F is inactivated .
• Transcription gets halt and cell gets time for the repair of DNA
damage.
References :
• https://youtu.be/VLJF8Pf8spw
• https://youtu.be/nEMMKzYQf9A
• Nelson and Cox Lehninger principles of biochemistry 6th
edition (chapter no.12)
• https://www.khanacademy.org/science/ap-biology/cell-
communication-and-cell-cycle/regulation-of-cell-cycle/a/cell-
cycle-regulators
Thank you!

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Cyclin dependent kinases

  • 2. What are CDK’s? • Cyclin-dependent kinases (CDKs) are protein kinases involved in critical cellular processes. • They are important in the regulation and control of cell cycle. • They are also involved in regulating transcription, mRNA processing, and the differentiation of nerve cells. • They are always present in the cells in their inactive form , but the binding of a cyclin activates it, making it a functional enzyme and allowing it to modify target proteins. • CDK’s are the enzymes that phosphorylates specific target proteins and the attached phosphate group acts like a switch, making the target protein more or less active.
  • 4. Cyclin and CDK complexes present in different phases :
  • 6.
  • 7.
  • 9. • Tumor suppressor protein retinoblastoma (Rb) protein holding transcription factor E2F. • cyclin_-CDK complex phosphorylate the Rb protein and leads the release of E2F. • E2F can then activate transcription of the cyclin E gene. Cyclin E binds CDK2, and this complex fully phosphorylates Rb, completing its inactivation. Cyclin E also phosphorylates p27Kip1, an inhibitor of Cyclin D. Phosphorylation of p27Kip1 tags it for degradation. Degradation of this protein promotes expression of cyclin A. • During S phase, Cyclin A ensures that DNA replication only occurs ONCE per cell cycle by preventing assembly of excessive replication complexes.
  • 10. • The Cyclin A-CDK2 complex also regulates DNA replication by phosphorylating certain DNA replication machinery components. • When the cell transition occur to M phase cyclin A gets replaced with cyclin B. • Cyclin B is a mitotic cyclin which binds to CDK1 to form the maturation promoting factor, or mitosis promoting factor . The concentration of MPF rises until mitosis, until its concentration falls abruptly due to degradation of Cyclin B. High concentrations of Cyclin B are necessary for cells to enter M phase, and low concentrations are needed to exit M phase.
  • 11. • When DNA damage is their cyclin cdk inhibitors gets activated i.e. Tumor suppressor proteins like p53,p21,p27kip1 etc. • P53 activates p21 and binds all cyclin cdk complexes and activity of Rb proteins get restored and E2F is inactivated . • Transcription gets halt and cell gets time for the repair of DNA damage.
  • 12.
  • 13.
  • 14. References : • https://youtu.be/VLJF8Pf8spw • https://youtu.be/nEMMKzYQf9A • Nelson and Cox Lehninger principles of biochemistry 6th edition (chapter no.12) • https://www.khanacademy.org/science/ap-biology/cell- communication-and-cell-cycle/regulation-of-cell-cycle/a/cell- cycle-regulators