Intracellular Phase Transitions
From Organelle Function to Disease
Cliff Brangwynne
Princeton University
Soft Living
Matter Group
Alzforum Webinar, October 30, 2015
Germ (P) granules
Processing bodies
Nucleoli
RNA/Protein (RNP) Bodies
Membrane-less organelles
Spector, Parker, Strome, Misteli, Lamond et.al.
3
Pathological Protein Aggregation
Text
Alzheimers
Mad cow disease
Amyotrophic Lateral Sclerosis (ALS)
2 per 100,000
1 in 9 Americans over 65
quite rare (170 deaths worldwide in 10 years)
Elbaum, CPB et.al. PNAS 2015
Zhang, CPB, Gladfelter, et.al. Mol.Cell. 2015
Berry, Weber, Haataja, CPB et.al. PNAS 2015
Weber and CPB, Curr. Biol. 2015
Berry, CPB et.al. PNAS 2015
Disordered Proteins (IDP/LCS)
CPB, Hyman, et.al. Science 2009
Lee, CPB, et.al. Phys.Rev.Lett 2013
P Granules
Liquid-liquid phase transitions appear to be a
ubiquitous mechanism for intracellular organization
Nucleoli
Synthetic Bodies
Nott, Forman-Kay, Baldwin et.al.
Molecular Cell 2015Li, Rosen et.al. Nature 2012
Multi-valent Proteins DDX4 Nuclear Bodies
CPB et.al. PNAS 2011
Feric and CPB Nature Cell Bio. 2013
Physiological Liquids and Pathological Solids
Zhang, CPB, Gladfelter et.al. Molecular Cell, 2015
Whi3
Patel, Lee, Hyman, Alberti Cell 2015
FUS
Molliex, Mittag,
Taylor et.al. Cell 2015
Lin, Protter, Rosen, Parker
Molecular Cell, 2015
hnRNPA1
Weber & CPB Cell 2012
RNA Impacts Droplet Assembly and Properties
Laf-1
Elbaum-Garfinkle, Kim, Szczepaniak,
Eckmann, Myong, CPB PNAS 2015
Nucleoli
Nucleoli in HeLa cells
Intergenic
spacer
18s 5.8s 26s
ITS1 ITS2nascent
rRNA
transcript
Tandem rDNA gene repeats
Nucleolus
Intergenic
spacer
Internal Transcribed Spacers
Ribosomal subunits
Zhang, CPB, Gladfelter et.al., Mol. Cell 2015 Berry, Weber, Vaidya, Haataja, CPB, PNAS 2015
Whi-3
DNA RNA Protein
Phase Transitions and the
Flow of Genetic Information
www.softlivingmatter.comSoft Living
Matter Group
Funding
Collaborators
Brangwynne Lab
Students & Postdocs
Shani Elbaum
Nilesh Vaidya
Sravanti Uppaluri
Steven Wei
Yongdae Shin
Carlos Chen
Lian Zhu
Nicole Taylor
Marina Feric
Aleena Patel
Laura Gray
Mikko Haataja (Princeton)
Joel Berry (Princeton)
Howard Stone (Princeton)
Amy Gladfelter (Dartmouth)
Richard Kriwacki (St. Jude)
Rohit Pappu (WUSTL)
Christian Eckmann (Halle)
Sua Myong (UIUC)
Huaiying Zhang
Steph Weber

Cliff Brangwynne

  • 1.
    Intracellular Phase Transitions FromOrganelle Function to Disease Cliff Brangwynne Princeton University Soft Living Matter Group Alzforum Webinar, October 30, 2015
  • 2.
    Germ (P) granules Processingbodies Nucleoli RNA/Protein (RNP) Bodies Membrane-less organelles Spector, Parker, Strome, Misteli, Lamond et.al.
  • 3.
    3 Pathological Protein Aggregation Text Alzheimers Madcow disease Amyotrophic Lateral Sclerosis (ALS) 2 per 100,000 1 in 9 Americans over 65 quite rare (170 deaths worldwide in 10 years)
  • 4.
    Elbaum, CPB et.al.PNAS 2015 Zhang, CPB, Gladfelter, et.al. Mol.Cell. 2015 Berry, Weber, Haataja, CPB et.al. PNAS 2015 Weber and CPB, Curr. Biol. 2015 Berry, CPB et.al. PNAS 2015 Disordered Proteins (IDP/LCS) CPB, Hyman, et.al. Science 2009 Lee, CPB, et.al. Phys.Rev.Lett 2013 P Granules Liquid-liquid phase transitions appear to be a ubiquitous mechanism for intracellular organization Nucleoli Synthetic Bodies Nott, Forman-Kay, Baldwin et.al. Molecular Cell 2015Li, Rosen et.al. Nature 2012 Multi-valent Proteins DDX4 Nuclear Bodies CPB et.al. PNAS 2011 Feric and CPB Nature Cell Bio. 2013
  • 5.
    Physiological Liquids andPathological Solids Zhang, CPB, Gladfelter et.al. Molecular Cell, 2015 Whi3 Patel, Lee, Hyman, Alberti Cell 2015 FUS Molliex, Mittag, Taylor et.al. Cell 2015 Lin, Protter, Rosen, Parker Molecular Cell, 2015 hnRNPA1 Weber & CPB Cell 2012
  • 6.
    RNA Impacts DropletAssembly and Properties Laf-1 Elbaum-Garfinkle, Kim, Szczepaniak, Eckmann, Myong, CPB PNAS 2015 Nucleoli Nucleoli in HeLa cells Intergenic spacer 18s 5.8s 26s ITS1 ITS2nascent rRNA transcript Tandem rDNA gene repeats Nucleolus Intergenic spacer Internal Transcribed Spacers Ribosomal subunits Zhang, CPB, Gladfelter et.al., Mol. Cell 2015 Berry, Weber, Vaidya, Haataja, CPB, PNAS 2015 Whi-3
  • 7.
    DNA RNA Protein PhaseTransitions and the Flow of Genetic Information
  • 8.
    www.softlivingmatter.comSoft Living Matter Group Funding Collaborators BrangwynneLab Students & Postdocs Shani Elbaum Nilesh Vaidya Sravanti Uppaluri Steven Wei Yongdae Shin Carlos Chen Lian Zhu Nicole Taylor Marina Feric Aleena Patel Laura Gray Mikko Haataja (Princeton) Joel Berry (Princeton) Howard Stone (Princeton) Amy Gladfelter (Dartmouth) Richard Kriwacki (St. Jude) Rohit Pappu (WUSTL) Christian Eckmann (Halle) Sua Myong (UIUC) Huaiying Zhang Steph Weber