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Chapter 4: Chemical Composition of Cells

Carbohydrate

1. Consists of carbon, hydrogen and oxygen in the ratio CnH2nOn.
2. Functions:
    a) Provide energy during respiration
    b) Stored food in animals’ liver ( glycogen ) and in plants’ cell ( starch )
    c) Build cell wall in plant cells
    d) External skeleton of insects
3. Carbohydrate can be divided into 3 types:
    a) Monosaccharide                   c) Polysaccharide
    b) Disaccharide
4. Monosaccharide
    a) Simplest form of carbohydrate
    b) Some examples are glucose (most common monosaccharide), fructose (found in
       fruits) and galactose (found in milk).
    c) Monosaccharides are reducing sugar which turns light blue of Benedict’s solution to
       red-brick precipitate upon heating.
5. Disaccharide
    a) Monosaccharide + Monosaccharide  Disaccharide + water
    b) The process of producing disaccharide is condensation
    c) Some of the disaccharides are maltose (malt sugar), sucrose (cane sugar) and lactose
       (milk sugar).
    d) Glucose + Glucose  Maltose + Water
       Glucose + Fructose  Sucrose + Water
       Glucose + Galactose  Lactose + Water
    e) Maltose is used for brewing beer while sucrose is used as sweetener in beverage and
       cooking. Lactose is present in mammal’s milk, including human.
    f) Only sucrose is non-reducing sugar.
6. Polysaccharide
    a) Many glucose undergo condensation to form polysaccharide.
    b) Polysaccharides are insoluble in water, do not crystallize and do not taste sweet.
    c) 3 types of polysaccharides are starch, glycogen and cellulose.


1                                                                           © Gabriel Chua, 2013
d) Starch is the main energy storage in plants and can be found in wheat, rice, potato
       and bread.
    e) Glycogen is the main energy storage in animals and yeast. They are stored in liver and
       muscle.
    f) Cellulose makes up the cell wall of plant cells, which provide support for plants.
    g) Polysaccharide can be broken down via hydrolysis process.

Protein

1. Consists of carbon, hydrogen, oxygen and nitrogen. Some may have sulphur and
    phosphorus.
2. The building block of protein is amino acid.
3. Amino acids are joined by peptide bond to form protein via condensation process.
    Amino acid + Amino acid            Dipeptide + Water
4. Many amino acids bind together to form polypeptides.
5. Breaking of polypeptide is known as hydrolysis.
6. Amino acids can be grouped into 2 types:
    a) Essential amino acids (can’t be synthesized by body cells. Obtained from food.)
    b) Non-essential amino acids (can be synthesized by body cells)
7. Structure of protein can be classified into 4 levels:
    a) Primary structure (arranged in sequence forming long linear chain of polypeptide)
    b) Secondary structure (coiled to form alpha-helix or beta-pleated sheet)
    c) Tertiary structure (folded in various way to form globular protein)
    d) Quaternary structure (folded polypeptide chains joined together forming a large
       complex protein molecule)




       Primary structure      Secondary              Tertiary structure Quaternary
                              structure              (hormone, enzyme) structure
                                                                        (haemoglobin in
                                                                        red blood cell)
                              Beta-pleated         Alpha-helix




2                                                                         © Gabriel Chua, 2013
8. Importance of protein:
    a) Growth of new cells and replace dead cells
    b) Synthesis of enzymes, antibodies and some hormones
    c) Form keratin (skin) and collagen (bone)
    d) Synthesis of haemoglobin ( quaternary structure)

Lipids

1. Consists of carbon, hydrogen and oxygen.
2. Building blocks are fatty acids and glycerol.
3. Triglycerides (a type of lipid) are made up of 1 glycerol and 3 fatty acids.
4. Triglycerides is formed when glycerol bind with fatty acids via condensation process.
    Triglycerides can be broken down by hydrolysis

                                           condensation
             1 glycerol + 3 fatty acids                      triglycerides + water
                                             hydrolysis

5. Fats and oils are triglycerides. Fats and oils can be divided into saturated and unsaturated
    fat.
               Aspect                     Saturated fats               Unsaturated fats
    Presence of double bond
    at fatty acid                 No double bond at fatty        Have at least 1 double bond
                                          acids                         at fatty acids

    Reaction with additional
                             No reaction with hydrogen
    hydrogen bonds (give                                         Can react with hydrogen as
                             as has maximum number of
    reason for your answer)                                        there are double bond
                                      hydrogen
    Cholesterol level                    Higher                             Lower
    State at room temperature             Solid                             Liquid
    Example                       Animal fat (fatty meat),
                                                                   Vegetable oil, margarine
                                          butter

6. Importance of lipids:
    a) Source of energy (twice of carbohydrate)
    b) Heat insulator (keep organisms warm)
    c) Protect major organs




3                                                                         © Gabriel Chua, 2013
Nucleic acids

1. Basic unit structure is nucleotides which consists of pentose sugar, nitrogenous base and
    phosphate group.




2. Two types of nucleic acid:
    a) DNA (deoxyribonucleic acid) which consists of 2 strands of polynucleotides, twisted
       into alpha-helix structure.
    b) RNA (ribonucleic acid) which consists of 1 strand of polynucleotide.




3. Importance of nucleic acids in cells:
    a) Carry genetic information in all cells (DNA)
    b) Regulate in protein synthesis (RNA)
    c) Determine the traits inherited from parents (DNA)

Water

1. Importance of water:
    a) As a solvent to dissolve substances such as gases (O2 & CO2) for respiration
    b) As a medium for biochemical reaction
    c) Maintain body temperature
    d) As transport medium as blood plasma (90%) carries many biological molecules

4                                                                        © Gabriel Chua, 2013
e) Provide moisture such as in respiratory tract to allow diffusion of gas
    f) Provide support such as in plants, especially when the cells are turgid

Enzymes

1. Enzymes are organic catalyst that increases the rate of biochemical reactions.
2. Enzyme + Substrate  Enzyme-substrate complex  Enzyme + Product
3. Works by the Lock and Key Hypothesis




         Enzyme + Substrate           Enzyme-substrate            Enzyme + Product
                                      complex

4. Characteristics:
    a) Speed up biochemical reactions
    b) Not changed / altered or destroyed after reaction
    c) Needed in very small amount
    d) Reaction is specific
    e) Reversible reaction
    f) Work with narrow range of temperature (350C – 400C) and sensitive to pH.
5. Enzyme synthesis is the same as protein synthesis because enzyme is a type of protein

                   DNA in nucleus carries information for protein synthesis


         Information in DNA is transcribed into mRNA which carries information to
                                        ribosome


               The information is translated and protein is formed in ribosome

6. Enzymes can be divided into two types, ie. intracellular enzymes (use within the cell) and
    extracellular enzymes (to be secreted outside the cell).




5                                                                         © Gabriel Chua, 2013
7. For extracellular enzymes, after the enzyme protein is synthesized as shown in (5), it
    follows a series of steps:

                    Proteins enter rough ER and packed as transport vesicle


             Transport vesicle carries protein into Golgi apparatus where protein is
                                      modified into enzymes


              Enzymes are packed into secretory vesicle and transported to plasma
                                          membrane


            Secretory vesicle is fuses with plasma membrane and enzyme is released




I personally think that this flow chart is quite a good one. I only managed to sketch a
simple one in one of your relief class. So, here it is the complete one. You may copy it into
the notes I gave you.




6                                                                         © Gabriel Chua, 2013
Rough ER



    Nucleus
                                                                Secretory
                                                                vesicle
                                              Ribosome




                                    Transport
                        Protein     vesicle
                                                                            Golgi
                                                                            apparatus




8. Factors that affect enzyme activities are temperature, pH, substrate concentration and
    enzyme concentration.

     Temperature                                pH




    Substrate                                   Enzyme
    concentration                               concentration




7                                                                    © Gabriel Chua, 2013
Uses of enzymes

Applications         Enzymes used
Detergent              Enzyme protease, amylase and lipase to remove food and other
                       stains from clothes

Leather products       Enzyme protease to remove animal hair from their skin.

Wine production        Enzyme zymase

Tenderise meat         Enzyme protease



I will not go into detail for this part. You can refer to your reference book, text book or
even internet for the usage of many different types of enzymes.




8                                                                     © Gabriel Chua, 2013

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Chapter 4 with answer

  • 1. Chapter 4: Chemical Composition of Cells Carbohydrate 1. Consists of carbon, hydrogen and oxygen in the ratio CnH2nOn. 2. Functions: a) Provide energy during respiration b) Stored food in animals’ liver ( glycogen ) and in plants’ cell ( starch ) c) Build cell wall in plant cells d) External skeleton of insects 3. Carbohydrate can be divided into 3 types: a) Monosaccharide c) Polysaccharide b) Disaccharide 4. Monosaccharide a) Simplest form of carbohydrate b) Some examples are glucose (most common monosaccharide), fructose (found in fruits) and galactose (found in milk). c) Monosaccharides are reducing sugar which turns light blue of Benedict’s solution to red-brick precipitate upon heating. 5. Disaccharide a) Monosaccharide + Monosaccharide  Disaccharide + water b) The process of producing disaccharide is condensation c) Some of the disaccharides are maltose (malt sugar), sucrose (cane sugar) and lactose (milk sugar). d) Glucose + Glucose  Maltose + Water Glucose + Fructose  Sucrose + Water Glucose + Galactose  Lactose + Water e) Maltose is used for brewing beer while sucrose is used as sweetener in beverage and cooking. Lactose is present in mammal’s milk, including human. f) Only sucrose is non-reducing sugar. 6. Polysaccharide a) Many glucose undergo condensation to form polysaccharide. b) Polysaccharides are insoluble in water, do not crystallize and do not taste sweet. c) 3 types of polysaccharides are starch, glycogen and cellulose. 1 © Gabriel Chua, 2013
  • 2. d) Starch is the main energy storage in plants and can be found in wheat, rice, potato and bread. e) Glycogen is the main energy storage in animals and yeast. They are stored in liver and muscle. f) Cellulose makes up the cell wall of plant cells, which provide support for plants. g) Polysaccharide can be broken down via hydrolysis process. Protein 1. Consists of carbon, hydrogen, oxygen and nitrogen. Some may have sulphur and phosphorus. 2. The building block of protein is amino acid. 3. Amino acids are joined by peptide bond to form protein via condensation process. Amino acid + Amino acid Dipeptide + Water 4. Many amino acids bind together to form polypeptides. 5. Breaking of polypeptide is known as hydrolysis. 6. Amino acids can be grouped into 2 types: a) Essential amino acids (can’t be synthesized by body cells. Obtained from food.) b) Non-essential amino acids (can be synthesized by body cells) 7. Structure of protein can be classified into 4 levels: a) Primary structure (arranged in sequence forming long linear chain of polypeptide) b) Secondary structure (coiled to form alpha-helix or beta-pleated sheet) c) Tertiary structure (folded in various way to form globular protein) d) Quaternary structure (folded polypeptide chains joined together forming a large complex protein molecule) Primary structure Secondary Tertiary structure Quaternary structure (hormone, enzyme) structure (haemoglobin in red blood cell) Beta-pleated Alpha-helix 2 © Gabriel Chua, 2013
  • 3. 8. Importance of protein: a) Growth of new cells and replace dead cells b) Synthesis of enzymes, antibodies and some hormones c) Form keratin (skin) and collagen (bone) d) Synthesis of haemoglobin ( quaternary structure) Lipids 1. Consists of carbon, hydrogen and oxygen. 2. Building blocks are fatty acids and glycerol. 3. Triglycerides (a type of lipid) are made up of 1 glycerol and 3 fatty acids. 4. Triglycerides is formed when glycerol bind with fatty acids via condensation process. Triglycerides can be broken down by hydrolysis condensation 1 glycerol + 3 fatty acids triglycerides + water hydrolysis 5. Fats and oils are triglycerides. Fats and oils can be divided into saturated and unsaturated fat. Aspect Saturated fats Unsaturated fats Presence of double bond at fatty acid No double bond at fatty Have at least 1 double bond acids at fatty acids Reaction with additional No reaction with hydrogen hydrogen bonds (give Can react with hydrogen as as has maximum number of reason for your answer) there are double bond hydrogen Cholesterol level Higher Lower State at room temperature Solid Liquid Example Animal fat (fatty meat), Vegetable oil, margarine butter 6. Importance of lipids: a) Source of energy (twice of carbohydrate) b) Heat insulator (keep organisms warm) c) Protect major organs 3 © Gabriel Chua, 2013
  • 4. Nucleic acids 1. Basic unit structure is nucleotides which consists of pentose sugar, nitrogenous base and phosphate group. 2. Two types of nucleic acid: a) DNA (deoxyribonucleic acid) which consists of 2 strands of polynucleotides, twisted into alpha-helix structure. b) RNA (ribonucleic acid) which consists of 1 strand of polynucleotide. 3. Importance of nucleic acids in cells: a) Carry genetic information in all cells (DNA) b) Regulate in protein synthesis (RNA) c) Determine the traits inherited from parents (DNA) Water 1. Importance of water: a) As a solvent to dissolve substances such as gases (O2 & CO2) for respiration b) As a medium for biochemical reaction c) Maintain body temperature d) As transport medium as blood plasma (90%) carries many biological molecules 4 © Gabriel Chua, 2013
  • 5. e) Provide moisture such as in respiratory tract to allow diffusion of gas f) Provide support such as in plants, especially when the cells are turgid Enzymes 1. Enzymes are organic catalyst that increases the rate of biochemical reactions. 2. Enzyme + Substrate  Enzyme-substrate complex  Enzyme + Product 3. Works by the Lock and Key Hypothesis Enzyme + Substrate Enzyme-substrate Enzyme + Product complex 4. Characteristics: a) Speed up biochemical reactions b) Not changed / altered or destroyed after reaction c) Needed in very small amount d) Reaction is specific e) Reversible reaction f) Work with narrow range of temperature (350C – 400C) and sensitive to pH. 5. Enzyme synthesis is the same as protein synthesis because enzyme is a type of protein DNA in nucleus carries information for protein synthesis Information in DNA is transcribed into mRNA which carries information to ribosome The information is translated and protein is formed in ribosome 6. Enzymes can be divided into two types, ie. intracellular enzymes (use within the cell) and extracellular enzymes (to be secreted outside the cell). 5 © Gabriel Chua, 2013
  • 6. 7. For extracellular enzymes, after the enzyme protein is synthesized as shown in (5), it follows a series of steps: Proteins enter rough ER and packed as transport vesicle Transport vesicle carries protein into Golgi apparatus where protein is modified into enzymes Enzymes are packed into secretory vesicle and transported to plasma membrane Secretory vesicle is fuses with plasma membrane and enzyme is released I personally think that this flow chart is quite a good one. I only managed to sketch a simple one in one of your relief class. So, here it is the complete one. You may copy it into the notes I gave you. 6 © Gabriel Chua, 2013
  • 7. Rough ER Nucleus Secretory vesicle Ribosome Transport Protein vesicle Golgi apparatus 8. Factors that affect enzyme activities are temperature, pH, substrate concentration and enzyme concentration. Temperature pH Substrate Enzyme concentration concentration 7 © Gabriel Chua, 2013
  • 8. Uses of enzymes Applications Enzymes used Detergent Enzyme protease, amylase and lipase to remove food and other stains from clothes Leather products Enzyme protease to remove animal hair from their skin. Wine production Enzyme zymase Tenderise meat Enzyme protease I will not go into detail for this part. You can refer to your reference book, text book or even internet for the usage of many different types of enzymes. 8 © Gabriel Chua, 2013