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International Journal of Trend in
International Open Access Journal
ISSN No: 2456
@ IJTSRD | Available Online @ www.ijtsrd.com
Matthew N. O. Sadiku
1
Roy G. Perry College of Engineering, Prairie View A&M University, Prairie View, Texas
2
Lone Star College
ABSTRACT
Biocomputing is an interdisciplinary research area
which combines biology, computer science, and
engineering. It is the process of building computers
that use biological materials. It uses systems of
biologically derived molecules, such as
DNA, to perform computational calculations. This
paper provides a brief introduction to biocomputing.
Keyword: biocomputing, molecular computing, DNA
computing
INTRODUCTION
Biocomputing, known also as molecular computing or
DNA computing, is a fascinating development at the
interface of computer science and molecular biology.
It is the application of information technology and
computer science to biological problems.
Biocomputing is the use of computers which function
like living organisms or contain biological
components. Biocomputers use systems of
biologically derived molecules such as
deoxyribonucleic acid) and proteins
computation. They are computers made of proteins,
genes, and cells; they can perform mathematical
operations. Proteins are the fundamental building
blocks of life. Cells are made up of proteins. The cell
is understood as a computational system; its program
resides in DNA.
Biological computing can provide a huge parallelism
for handling problems in the real world. DNA
computers have the capability of high performance
computing [1]. The biological computers are mostly
used for medical applications. Scientists have been
able to create genetic biocircuits that can perform all
basic Boolean logic gates: AND, OR, NOT, NAND,
NOR, XOR, and XNOR. The functional block
International Journal of Trend in Scientific Research and Development (IJTSRD)
International Open Access Journal | www.ijtsrd.com
ISSN No: 2456 - 6470 | Volume - 2 | Issue – 6 | Sep
www.ijtsrd.com | Volume – 2 | Issue – 6 | Sep-Oct 2018
Biocomputing
Matthew N. O. Sadiku1
, Nana K. Ampah2
, Sarhan M. Musa
1
Professor, 2
Adjunct Faculty
Roy G. Perry College of Engineering, Prairie View A&M University, Prairie View, Texas
Lone Star College Kingwood, Houston, Texas
Biocomputing is an interdisciplinary research area
which combines biology, computer science, and
engineering. It is the process of building computers
that use biological materials. It uses systems of
biologically derived molecules, such as proteins and
DNA, to perform computational calculations. This
paper provides a brief introduction to biocomputing.
biocomputing, molecular computing, DNA
Biocomputing, known also as molecular computing or
is a fascinating development at the
interface of computer science and molecular biology.
It is the application of information technology and
computer science to biological problems.
Biocomputing is the use of computers which function
like living organisms or contain biological
use systems of
biologically derived molecules such as DNA (or
proteins to perform
uters made of proteins,
genes, and cells; they can perform mathematical
Proteins are the fundamental building
blocks of life. Cells are made up of proteins. The cell
is understood as a computational system; its program
al computing can provide a huge parallelism
for handling problems in the real world. DNA
computers have the capability of high performance
computing [1]. The biological computers are mostly
used for medical applications. Scientists have been
e genetic biocircuits that can perform all
basic Boolean logic gates: AND, OR, NOT, NAND,
NOR, XOR, and XNOR. The functional block
diagram of the biocomputing system is shown in
Figure 1 [2].
BENEFITS AND CHALLENGES
We use biocomputer for its multi
effective, little waste, high artificial intelligence (AI),
self-recovery, and massive memory. DNA Computers
can perform massively parallel computation and are
highly energy efficient systems [3]. Biocomputing
can open up a whole different r
Currently, a biocomputer requires hours to return an
output. For this reason, biocomputers may never
match their digital counterparts in terms of speed.
However, significant advances in biology are likely
to be made in the coming years
have impact on biocomputing. The possibility of CPU
being replaced by biological molecules remains in the
far future.
The challenge for biologists nowadays lies in the de
codification of the complex data they have to handle
in order to achieve a better understanding of how our
genes shape and how our genome evolved [4].
Scientists that are involved in the biocomputing must
take care of legal, moral, and ethical regulations.
CONCLUSION
While we live in the age of computers, biocomput
is slowly gaining importance. The new field of
biocomputing has emerged through the
interdisciplinary efforts of engineers and scientists. As
engineers and scientists do research on biocomputing,
the new discoveries will revolutionize the medical
field. Thus, the future for biocomputing is bright. It
will lay the foundations for a new era of computing
[5]. Additional information about biocomputing can
be obtained in [6].
Research and Development (IJTSRD)
www.ijtsrd.com
6 | Sep – Oct 2018
Oct 2018 Page: 1250
Sarhan M. Musa1
Roy G. Perry College of Engineering, Prairie View A&M University, Prairie View, Texas
diagram of the biocomputing system is shown in
BENEFITS AND CHALLENGES
We use biocomputer for its multi-processor, cost
effective, little waste, high artificial intelligence (AI),
recovery, and massive memory. DNA Computers
can perform massively parallel computation and are
highly energy efficient systems [3]. Biocomputing
can open up a whole different realm of computing.
Currently, a biocomputer requires hours to return an
output. For this reason, biocomputers may never
match their digital counterparts in terms of speed.
However, significant advances in biology are likely
to be made in the coming years and the advances will
have impact on biocomputing. The possibility of CPU
being replaced by biological molecules remains in the
The challenge for biologists nowadays lies in the de-
codification of the complex data they have to handle
to achieve a better understanding of how our
genes shape and how our genome evolved [4].
Scientists that are involved in the biocomputing must
take care of legal, moral, and ethical regulations.
While we live in the age of computers, biocomputing
is slowly gaining importance. The new field of
biocomputing has emerged through the
interdisciplinary efforts of engineers and scientists. As
engineers and scientists do research on biocomputing,
the new discoveries will revolutionize the medical
. Thus, the future for biocomputing is bright. It
will lay the foundations for a new era of computing
[5]. Additional information about biocomputing can
International Journal of Trend in Scientific Research and Development (IJTSRD) ISSN: 2456
@ IJTSRD | Available Online @ www.ijtsrd.com
REFERENCES
1. M. Guo, M. Ho, and W. L. Chang, “Fast parallel
molecular solution to the dominating
on massively parallel bio-computing,”
Computing, vol. 30, 2004, pp. 1109-
2. V. H. Kumar and P. S. Ramaiah, “Configuration
of FPGA for computerized s
processing for bio-computing systems,”
International Journal of Computer Science Issues
vol. 8, issue 5, no 3, September 2011, pp. 246
255.
3. M. S. Ahuja and S. Sharma, “Biological
computing: A new paradigm in computing,”
Proceedings of the 3rd
Conference on Recent
Innovations in Science, Technology, Management
Figure1. Functional block diagram of bio
International Journal of Trend in Scientific Research and Development (IJTSRD) ISSN: 2456
www.ijtsrd.com | Volume – 2 | Issue – 6 | Sep-Oct 2018
M. Guo, M. Ho, and W. L. Chang, “Fast parallel
molecular solution to the dominating-set problem
computing,” Parallel
-1125.
V. H. Kumar and P. S. Ramaiah, “Configuration
of FPGA for computerized speech/sound
computing systems,”
International Journal of Computer Science Issues,
vol. 8, issue 5, no 3, September 2011, pp. 246-
M. S. Ahuja and S. Sharma, “Biological
computing: A new paradigm in computing,”
Conference on Recent
Innovations in Science, Technology, Management
and Environment, New Delhi, India, December
2016, pp. 162-166.
4. D. Herath, C. Lakmali, and R. Ragel,
“Accelerating string matching for bio
applications on multi-core CPUs,”
the IEEE 7th International Conference on
Industrial and Information Systems
2012
5. S. L. Garfinke, “Biological computing,”
Technology Review, May/June 2000, pp. 71
6. A. J. Ijspeert, M. Murata, and N. Wakamiya
(eds.), Biologically Inspired Approaches to
Advanced Information Technology
Germany: Springer, 2004.
Functional block diagram of bio-computing [2]
International Journal of Trend in Scientific Research and Development (IJTSRD) ISSN: 2456-6470
Oct 2018 Page: 1251
, New Delhi, India, December
D. Herath, C. Lakmali, and R. Ragel,
“Accelerating string matching for bio-computing
core CPUs,” Proceedings of
the IEEE 7th International Conference on
Industrial and Information Systems, September
Garfinke, “Biological computing,”
May/June 2000, pp. 71-77.
A. J. Ijspeert, M. Murata, and N. Wakamiya
Inspired Approaches to
Advanced Information Technology. Berlin,

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Biocomputing

  • 1. International Journal of Trend in International Open Access Journal ISSN No: 2456 @ IJTSRD | Available Online @ www.ijtsrd.com Matthew N. O. Sadiku 1 Roy G. Perry College of Engineering, Prairie View A&M University, Prairie View, Texas 2 Lone Star College ABSTRACT Biocomputing is an interdisciplinary research area which combines biology, computer science, and engineering. It is the process of building computers that use biological materials. It uses systems of biologically derived molecules, such as DNA, to perform computational calculations. This paper provides a brief introduction to biocomputing. Keyword: biocomputing, molecular computing, DNA computing INTRODUCTION Biocomputing, known also as molecular computing or DNA computing, is a fascinating development at the interface of computer science and molecular biology. It is the application of information technology and computer science to biological problems. Biocomputing is the use of computers which function like living organisms or contain biological components. Biocomputers use systems of biologically derived molecules such as deoxyribonucleic acid) and proteins computation. They are computers made of proteins, genes, and cells; they can perform mathematical operations. Proteins are the fundamental building blocks of life. Cells are made up of proteins. The cell is understood as a computational system; its program resides in DNA. Biological computing can provide a huge parallelism for handling problems in the real world. DNA computers have the capability of high performance computing [1]. The biological computers are mostly used for medical applications. Scientists have been able to create genetic biocircuits that can perform all basic Boolean logic gates: AND, OR, NOT, NAND, NOR, XOR, and XNOR. The functional block International Journal of Trend in Scientific Research and Development (IJTSRD) International Open Access Journal | www.ijtsrd.com ISSN No: 2456 - 6470 | Volume - 2 | Issue – 6 | Sep www.ijtsrd.com | Volume – 2 | Issue – 6 | Sep-Oct 2018 Biocomputing Matthew N. O. Sadiku1 , Nana K. Ampah2 , Sarhan M. Musa 1 Professor, 2 Adjunct Faculty Roy G. Perry College of Engineering, Prairie View A&M University, Prairie View, Texas Lone Star College Kingwood, Houston, Texas Biocomputing is an interdisciplinary research area which combines biology, computer science, and engineering. It is the process of building computers that use biological materials. It uses systems of biologically derived molecules, such as proteins and DNA, to perform computational calculations. This paper provides a brief introduction to biocomputing. biocomputing, molecular computing, DNA Biocomputing, known also as molecular computing or is a fascinating development at the interface of computer science and molecular biology. It is the application of information technology and computer science to biological problems. Biocomputing is the use of computers which function like living organisms or contain biological use systems of biologically derived molecules such as DNA (or proteins to perform uters made of proteins, genes, and cells; they can perform mathematical Proteins are the fundamental building blocks of life. Cells are made up of proteins. The cell is understood as a computational system; its program al computing can provide a huge parallelism for handling problems in the real world. DNA computers have the capability of high performance computing [1]. The biological computers are mostly used for medical applications. Scientists have been e genetic biocircuits that can perform all basic Boolean logic gates: AND, OR, NOT, NAND, NOR, XOR, and XNOR. The functional block diagram of the biocomputing system is shown in Figure 1 [2]. BENEFITS AND CHALLENGES We use biocomputer for its multi effective, little waste, high artificial intelligence (AI), self-recovery, and massive memory. DNA Computers can perform massively parallel computation and are highly energy efficient systems [3]. Biocomputing can open up a whole different r Currently, a biocomputer requires hours to return an output. For this reason, biocomputers may never match their digital counterparts in terms of speed. However, significant advances in biology are likely to be made in the coming years have impact on biocomputing. The possibility of CPU being replaced by biological molecules remains in the far future. The challenge for biologists nowadays lies in the de codification of the complex data they have to handle in order to achieve a better understanding of how our genes shape and how our genome evolved [4]. Scientists that are involved in the biocomputing must take care of legal, moral, and ethical regulations. CONCLUSION While we live in the age of computers, biocomput is slowly gaining importance. The new field of biocomputing has emerged through the interdisciplinary efforts of engineers and scientists. As engineers and scientists do research on biocomputing, the new discoveries will revolutionize the medical field. Thus, the future for biocomputing is bright. It will lay the foundations for a new era of computing [5]. Additional information about biocomputing can be obtained in [6]. Research and Development (IJTSRD) www.ijtsrd.com 6 | Sep – Oct 2018 Oct 2018 Page: 1250 Sarhan M. Musa1 Roy G. Perry College of Engineering, Prairie View A&M University, Prairie View, Texas diagram of the biocomputing system is shown in BENEFITS AND CHALLENGES We use biocomputer for its multi-processor, cost effective, little waste, high artificial intelligence (AI), recovery, and massive memory. DNA Computers can perform massively parallel computation and are highly energy efficient systems [3]. Biocomputing can open up a whole different realm of computing. Currently, a biocomputer requires hours to return an output. For this reason, biocomputers may never match their digital counterparts in terms of speed. However, significant advances in biology are likely to be made in the coming years and the advances will have impact on biocomputing. The possibility of CPU being replaced by biological molecules remains in the The challenge for biologists nowadays lies in the de- codification of the complex data they have to handle to achieve a better understanding of how our genes shape and how our genome evolved [4]. Scientists that are involved in the biocomputing must take care of legal, moral, and ethical regulations. While we live in the age of computers, biocomputing is slowly gaining importance. The new field of biocomputing has emerged through the interdisciplinary efforts of engineers and scientists. As engineers and scientists do research on biocomputing, the new discoveries will revolutionize the medical . Thus, the future for biocomputing is bright. It will lay the foundations for a new era of computing [5]. Additional information about biocomputing can
  • 2. International Journal of Trend in Scientific Research and Development (IJTSRD) ISSN: 2456 @ IJTSRD | Available Online @ www.ijtsrd.com REFERENCES 1. M. Guo, M. Ho, and W. L. Chang, “Fast parallel molecular solution to the dominating on massively parallel bio-computing,” Computing, vol. 30, 2004, pp. 1109- 2. V. H. Kumar and P. S. Ramaiah, “Configuration of FPGA for computerized s processing for bio-computing systems,” International Journal of Computer Science Issues vol. 8, issue 5, no 3, September 2011, pp. 246 255. 3. M. S. Ahuja and S. Sharma, “Biological computing: A new paradigm in computing,” Proceedings of the 3rd Conference on Recent Innovations in Science, Technology, Management Figure1. Functional block diagram of bio International Journal of Trend in Scientific Research and Development (IJTSRD) ISSN: 2456 www.ijtsrd.com | Volume – 2 | Issue – 6 | Sep-Oct 2018 M. Guo, M. Ho, and W. L. Chang, “Fast parallel molecular solution to the dominating-set problem computing,” Parallel -1125. V. H. Kumar and P. S. Ramaiah, “Configuration of FPGA for computerized speech/sound computing systems,” International Journal of Computer Science Issues, vol. 8, issue 5, no 3, September 2011, pp. 246- M. S. Ahuja and S. Sharma, “Biological computing: A new paradigm in computing,” Conference on Recent Innovations in Science, Technology, Management and Environment, New Delhi, India, December 2016, pp. 162-166. 4. D. Herath, C. Lakmali, and R. Ragel, “Accelerating string matching for bio applications on multi-core CPUs,” the IEEE 7th International Conference on Industrial and Information Systems 2012 5. S. L. Garfinke, “Biological computing,” Technology Review, May/June 2000, pp. 71 6. A. J. Ijspeert, M. Murata, and N. Wakamiya (eds.), Biologically Inspired Approaches to Advanced Information Technology Germany: Springer, 2004. Functional block diagram of bio-computing [2] International Journal of Trend in Scientific Research and Development (IJTSRD) ISSN: 2456-6470 Oct 2018 Page: 1251 , New Delhi, India, December D. Herath, C. Lakmali, and R. Ragel, “Accelerating string matching for bio-computing core CPUs,” Proceedings of the IEEE 7th International Conference on Industrial and Information Systems, September Garfinke, “Biological computing,” May/June 2000, pp. 71-77. A. J. Ijspeert, M. Murata, and N. Wakamiya Inspired Approaches to Advanced Information Technology. Berlin,