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APHIS and Biotechnology
APHIS’ authority for the regulation of
biotechnology is derived from
the Plant Protection Act of 2000.
If you are interested in APHIS’ biotechnology program initiatives
and current activities, please join our stakeholder registry to
receive automatic updates and other useful information. Register
at https://web01.aphis.usda.gov/BRS/BRSWeb.nsf.

For More Information
To find out more, please visit APHIS’ biotechnology Web site at
www.aphis.usda.gov/biotechnology/brs_main.shtml. If you have
additional questions about permitting or regulatory activities,
please call BRS at (301) 851-3886.

The U.S. Department of Agriculture (USDA) prohibits discrimination in all its programs
and activities on the basis of race, color, national origin, age, disability, and where
applicable, sex, marital status, familial status, parental status, religion, sexual orientation, genetic information, political beliefs, reprisal, or because all or part of an individual’s income is derived from any public assistance program. (Not all prohibited bases
apply to all programs.) Persons with disabilities who require alternative means for
communication of program information (Braille, large print, audiotape, etc.) should
contact USDA’s TARGET Center at (202) 720-2600 (voice and TDD). To file a complaint
of discrimination, write to USDA, Director, Office of Civil Rights, 1400 Independence
Avenue, S.W., Washington, D.C. 20250-9410, or call (800) 795-3272 (voice) or (202) 7206382 (TDD). USDA is an equal opportunity provider and employer.
This publication supersedes Program Aid No. 1841, “Biotechnology Regulatory
Services: Ensuring Safety in the Development of Genetically Engineered Organisms,”
which was published in October 2005.
Issued September 2012

United States Department of Agriculture
Animal and Plant Health Inspection Service
Program Aid No. 2120

APHIS and
Biotechnology
Protecting Plant Health Through
Rigorous Regulation of Genetically
Engineered Organisms
We Protect Plant Health

T

hrough our science-based regulatory
framework, the Animal and Plant Health

Inspection Service (APHIS) protects against risks to
U.S. plant health by providing for the safe importation, interstate movement, and environmental
release/field testing of certain genetically engineered

APHIS’ BIOTECHNOLOGY MISSION

(GE) organisms. APHIS is part of the U.S.
Department of Agriculture (USDA) and has

To protect and enhance America’s agricultural

regulated GE organisms since 1987.

and natural resources using a dynamic,
science-based regulatory framework to ensure
the safe importation, interstate movement,
and environmental release of genetically
engineered organisms.

APHIS regularly inspects GE field tests to monitor compliance with confinement
conditions. Here, an APHIS employee inspects GE cotton.

2

APHIS personnel inspecting GE corn at a field test site.

3
We’re Part of the Coordinated Framework
Established as a formal policy in 1986, the Coordinated
Framework for the Regulation of Biotechnology
describes the Federal system for evaluating products
developed using modern biotechnology. The three main
Federal agencies responsible for regulating the safe use of
genetically engineered organisms are APHIS, the U.S.
Environmental Protection Agency (EPA), and the U.S.
Department of Health and Human Services’ Food and
Drug Administration (FDA).
FDA has primary responsibility for ensuring the safety
of human food and animal feed, as well as proper
labeling and safety of all plant-derived foods and feeds.
EPA regulates pesticides, including plants with plantincorporated protectants (pesticides intended to be
produced and used in a living plant), to ensure public
safety. That agency also regulates pesticide residue on
food and animal feed. APHIS, through its Biotechnology
Regulatory Services (BRS) program, regulates the introduction of certain GE organisms that may pose a risk to
plant health.

We’re Science-Based
APHIS uses science as the foundation for sound decisions on policy, rulemaking, and regulatory approvals.
Experts in scientific fields (e.g., plant pathology, botany,
entomology, virology, ecology, environmental science,
molecular biology, and biochemistry) assess plant pest
risk and analyze environmental effects while considering
the most current peer-reviewed scientific findings. APHIS
bases its decisions and actions on the best science available.

4

Current peer-reviewed scientific data is analyzed as part of the regulatory review process.

5
We’re Transparent
APHIS makes it a priority to be transparent in all of our
procedures, decisions, and activities. On our Web site,
we publish relevant environmental and regulatory documents for the GE crops we regulate. We announce regulatory actions and the availability of related documents
in the Federal Register. The public may provide comments regarding proposed actions online at
www.regulations.gov, through conventional mail, and at
various public meetings. The APHIS biotechnology Web
site (www.aphis.usda.gov/biotechnology/brs_main.shtml)
offers access to a wide range of information, including
official documents, guidance for GE developers, application status, news, and upcoming events.

The APHIS Biotechnology Regulatory System
Developers seeking to field test, move interstate, or
import a GE organism must first submit detailed information to APHIS for review and receive regulatory

Six eligibility criteria for notification:
1. The GE plant is not listed as a Federal noxious
weed and is not considered a weed in the area of
introduction.
2. The genetic material must be “stably integrated”
into the plant genome.
3. The newly introduced gene’s function must be
known and not result in plant disease.
4. The newly introduced gene’s function must not
cause production of a plant pest, cause the plant to
produce substances that are toxic to nontarget
organisms, or be genetically engineered for the
purpose of producing compounds intended for
pharmaceutical or industrial use.
5. The newly introduced gene must not cause the
creation of a new plant virus.
6. The plant must not have been modified to contain
genes from animal or human pathogens.

approval. During its review, APHIS assesses the information for potential plant health risks before the introduction can be approved. Depending on the characteristics of the GE organism, a developer either files a
notification letter or applies for a permit.

The Notification Process
GE plants that meet six specific criteria (see sidebar above)
undergo an administratively streamlined alternative to
the permit process, known as “notification.”
As part of the notification process, applicants must provide information on the nature of the plant and introduced genes, descriptions of genetic modifications, size
of the introduction, and origin and destination for
movement or the location of a field test. Upon approval,
notifications are valid for 1 year from the date of issue.
If a plant does not meet the eligibility criteria for notification, the applicant must follow the permitting process.

APHIS personnel working in the ePermits system, used to electronically process permits
and notifications of regulated GE crops.

6

7
The Permit Process
The permit process applies to GE plants that do not
meet all six criteria for notification and to GE organisms
other than plants (e.g., insects, microbes) that fall under
APHIS regulation. This process involves a more comprehensive review than notification does. In addition to the
data required in the notification process, field-test permit
applicants must provide a detailed description of how
they will perform the test. This description must include
specific measures to reduce the risk of harm to other
plants, so the organisms being tested remain confined
and do not persist after completion of the field test.
Depending on the characteristics of the GE organism,
APHIS may impose additional measures and supplemental permit conditions. Permits may be valid for 1 year or
more from the date of issue.
APHIS also works closely with State departments of
agriculture and federally recognized tribes to ensure
that they are aware of field tests taking place within
their jurisdictions and have an opportunity to apply
any further safeguards at the State or tribal level.

Compliance With Regulations
APHIS officials perform inspections tailored to the specific requirements of the notification or permit. In addition, APHIS provides continuous education and outreach
to the regulated community, including the Biotechnology
Quality Management System (BQMS) Program. This
program provides participants with specific tools and
guidance to implement a BQMS tailored to their own
needs, facilitating more effective compliance with
APHIS regulations.
APHIS compliance specialists and inspectors perform
targeted inspections and audits to thoroughly evaluate
suspected or reported compliance infractions. The Plant
Protection Act of 2000 allows substantial penalties for
serious infractions, including fines of up to $500,000
and the possibility of criminal prosecution. APHIS works
closely with State departments of agriculture and other
Federal agencies, including the FDA and the EPA, to
ensure compliance with regulations.

8

APHIS requires that organizations conducting GE field trials keep detailed records
on all GE seed. Here, the seeds are counted, weighed, and logged.

9
Petition for Determining Nonregulated Status
Under the Plant Protection Act and title 7, section 340.6
of the Code of Federal Regulations (CFR), if developers
(applicants) can demonstrate that a GE organism is not a
plant pest, they can submit a petition (request) to APHIS
for a determination of nonregulated status; this status
means that the GE organism is no longer subject to regulatory oversight under 7 CFR part 340. The petitioner
must provide data, often gathered through confined field
tests regulated by APHIS, to help inform the agency’s
decision. APHIS analyzes data from the petitioner,
researches current scientific findings, and prepares a plant
pest risk assessment (PPRA) in accordance with the Act.
APHIS also prepares documentation required by the
National Environmental Policy Act of 1969 (NEPA);
under NEPA, all Federal agencies must take a close look
at the potential environmental impacts of their proposed
actions prior to making decisions. Therefore, at the same
time as it develops a PPRA, APHIS prepares either an
environmental assessment (EA) or an environmental
impact statement (EIS) to analyze potential environmental impacts the GE plant may have. Once complete,
APHIS makes the document available to the public
for comment. Overall, the petition process allows
for two, and in some cases three, opportunities for
public comment.
After receiving and considering all comments, APHIS
determines nonregulated status if it concludes that the
GE organism does not pose a plant pest risk. The GE
organism is then no longer subject to the regulations and
may be freely moved and planted without permits or
other regulatory oversight by APHIS. Most developers
will seek to obtain nonregulated status for their organism, along with completing applicable reviews at other
agencies, as a practical step toward commercialization.

10

APHIS personnel inspecting a combine harvester used in a GE corn field test.

11

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Aphis & biotechnology

  • 1. APHIS and Biotechnology APHIS’ authority for the regulation of biotechnology is derived from the Plant Protection Act of 2000. If you are interested in APHIS’ biotechnology program initiatives and current activities, please join our stakeholder registry to receive automatic updates and other useful information. Register at https://web01.aphis.usda.gov/BRS/BRSWeb.nsf. For More Information To find out more, please visit APHIS’ biotechnology Web site at www.aphis.usda.gov/biotechnology/brs_main.shtml. If you have additional questions about permitting or regulatory activities, please call BRS at (301) 851-3886. The U.S. Department of Agriculture (USDA) prohibits discrimination in all its programs and activities on the basis of race, color, national origin, age, disability, and where applicable, sex, marital status, familial status, parental status, religion, sexual orientation, genetic information, political beliefs, reprisal, or because all or part of an individual’s income is derived from any public assistance program. (Not all prohibited bases apply to all programs.) Persons with disabilities who require alternative means for communication of program information (Braille, large print, audiotape, etc.) should contact USDA’s TARGET Center at (202) 720-2600 (voice and TDD). To file a complaint of discrimination, write to USDA, Director, Office of Civil Rights, 1400 Independence Avenue, S.W., Washington, D.C. 20250-9410, or call (800) 795-3272 (voice) or (202) 7206382 (TDD). USDA is an equal opportunity provider and employer. This publication supersedes Program Aid No. 1841, “Biotechnology Regulatory Services: Ensuring Safety in the Development of Genetically Engineered Organisms,” which was published in October 2005. Issued September 2012 United States Department of Agriculture Animal and Plant Health Inspection Service Program Aid No. 2120 APHIS and Biotechnology Protecting Plant Health Through Rigorous Regulation of Genetically Engineered Organisms
  • 2. We Protect Plant Health T hrough our science-based regulatory framework, the Animal and Plant Health Inspection Service (APHIS) protects against risks to U.S. plant health by providing for the safe importation, interstate movement, and environmental release/field testing of certain genetically engineered APHIS’ BIOTECHNOLOGY MISSION (GE) organisms. APHIS is part of the U.S. Department of Agriculture (USDA) and has To protect and enhance America’s agricultural regulated GE organisms since 1987. and natural resources using a dynamic, science-based regulatory framework to ensure the safe importation, interstate movement, and environmental release of genetically engineered organisms. APHIS regularly inspects GE field tests to monitor compliance with confinement conditions. Here, an APHIS employee inspects GE cotton. 2 APHIS personnel inspecting GE corn at a field test site. 3
  • 3. We’re Part of the Coordinated Framework Established as a formal policy in 1986, the Coordinated Framework for the Regulation of Biotechnology describes the Federal system for evaluating products developed using modern biotechnology. The three main Federal agencies responsible for regulating the safe use of genetically engineered organisms are APHIS, the U.S. Environmental Protection Agency (EPA), and the U.S. Department of Health and Human Services’ Food and Drug Administration (FDA). FDA has primary responsibility for ensuring the safety of human food and animal feed, as well as proper labeling and safety of all plant-derived foods and feeds. EPA regulates pesticides, including plants with plantincorporated protectants (pesticides intended to be produced and used in a living plant), to ensure public safety. That agency also regulates pesticide residue on food and animal feed. APHIS, through its Biotechnology Regulatory Services (BRS) program, regulates the introduction of certain GE organisms that may pose a risk to plant health. We’re Science-Based APHIS uses science as the foundation for sound decisions on policy, rulemaking, and regulatory approvals. Experts in scientific fields (e.g., plant pathology, botany, entomology, virology, ecology, environmental science, molecular biology, and biochemistry) assess plant pest risk and analyze environmental effects while considering the most current peer-reviewed scientific findings. APHIS bases its decisions and actions on the best science available. 4 Current peer-reviewed scientific data is analyzed as part of the regulatory review process. 5
  • 4. We’re Transparent APHIS makes it a priority to be transparent in all of our procedures, decisions, and activities. On our Web site, we publish relevant environmental and regulatory documents for the GE crops we regulate. We announce regulatory actions and the availability of related documents in the Federal Register. The public may provide comments regarding proposed actions online at www.regulations.gov, through conventional mail, and at various public meetings. The APHIS biotechnology Web site (www.aphis.usda.gov/biotechnology/brs_main.shtml) offers access to a wide range of information, including official documents, guidance for GE developers, application status, news, and upcoming events. The APHIS Biotechnology Regulatory System Developers seeking to field test, move interstate, or import a GE organism must first submit detailed information to APHIS for review and receive regulatory Six eligibility criteria for notification: 1. The GE plant is not listed as a Federal noxious weed and is not considered a weed in the area of introduction. 2. The genetic material must be “stably integrated” into the plant genome. 3. The newly introduced gene’s function must be known and not result in plant disease. 4. The newly introduced gene’s function must not cause production of a plant pest, cause the plant to produce substances that are toxic to nontarget organisms, or be genetically engineered for the purpose of producing compounds intended for pharmaceutical or industrial use. 5. The newly introduced gene must not cause the creation of a new plant virus. 6. The plant must not have been modified to contain genes from animal or human pathogens. approval. During its review, APHIS assesses the information for potential plant health risks before the introduction can be approved. Depending on the characteristics of the GE organism, a developer either files a notification letter or applies for a permit. The Notification Process GE plants that meet six specific criteria (see sidebar above) undergo an administratively streamlined alternative to the permit process, known as “notification.” As part of the notification process, applicants must provide information on the nature of the plant and introduced genes, descriptions of genetic modifications, size of the introduction, and origin and destination for movement or the location of a field test. Upon approval, notifications are valid for 1 year from the date of issue. If a plant does not meet the eligibility criteria for notification, the applicant must follow the permitting process. APHIS personnel working in the ePermits system, used to electronically process permits and notifications of regulated GE crops. 6 7
  • 5. The Permit Process The permit process applies to GE plants that do not meet all six criteria for notification and to GE organisms other than plants (e.g., insects, microbes) that fall under APHIS regulation. This process involves a more comprehensive review than notification does. In addition to the data required in the notification process, field-test permit applicants must provide a detailed description of how they will perform the test. This description must include specific measures to reduce the risk of harm to other plants, so the organisms being tested remain confined and do not persist after completion of the field test. Depending on the characteristics of the GE organism, APHIS may impose additional measures and supplemental permit conditions. Permits may be valid for 1 year or more from the date of issue. APHIS also works closely with State departments of agriculture and federally recognized tribes to ensure that they are aware of field tests taking place within their jurisdictions and have an opportunity to apply any further safeguards at the State or tribal level. Compliance With Regulations APHIS officials perform inspections tailored to the specific requirements of the notification or permit. In addition, APHIS provides continuous education and outreach to the regulated community, including the Biotechnology Quality Management System (BQMS) Program. This program provides participants with specific tools and guidance to implement a BQMS tailored to their own needs, facilitating more effective compliance with APHIS regulations. APHIS compliance specialists and inspectors perform targeted inspections and audits to thoroughly evaluate suspected or reported compliance infractions. The Plant Protection Act of 2000 allows substantial penalties for serious infractions, including fines of up to $500,000 and the possibility of criminal prosecution. APHIS works closely with State departments of agriculture and other Federal agencies, including the FDA and the EPA, to ensure compliance with regulations. 8 APHIS requires that organizations conducting GE field trials keep detailed records on all GE seed. Here, the seeds are counted, weighed, and logged. 9
  • 6. Petition for Determining Nonregulated Status Under the Plant Protection Act and title 7, section 340.6 of the Code of Federal Regulations (CFR), if developers (applicants) can demonstrate that a GE organism is not a plant pest, they can submit a petition (request) to APHIS for a determination of nonregulated status; this status means that the GE organism is no longer subject to regulatory oversight under 7 CFR part 340. The petitioner must provide data, often gathered through confined field tests regulated by APHIS, to help inform the agency’s decision. APHIS analyzes data from the petitioner, researches current scientific findings, and prepares a plant pest risk assessment (PPRA) in accordance with the Act. APHIS also prepares documentation required by the National Environmental Policy Act of 1969 (NEPA); under NEPA, all Federal agencies must take a close look at the potential environmental impacts of their proposed actions prior to making decisions. Therefore, at the same time as it develops a PPRA, APHIS prepares either an environmental assessment (EA) or an environmental impact statement (EIS) to analyze potential environmental impacts the GE plant may have. Once complete, APHIS makes the document available to the public for comment. Overall, the petition process allows for two, and in some cases three, opportunities for public comment. After receiving and considering all comments, APHIS determines nonregulated status if it concludes that the GE organism does not pose a plant pest risk. The GE organism is then no longer subject to the regulations and may be freely moved and planted without permits or other regulatory oversight by APHIS. Most developers will seek to obtain nonregulated status for their organism, along with completing applicable reviews at other agencies, as a practical step toward commercialization. 10 APHIS personnel inspecting a combine harvester used in a GE corn field test. 11