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Advances in
Digital Scholarship
David De Roure
Research “on” the Web

• Web as an infrastructure for research
• Web as a source of data
• Web as a subject of research
• Web of scholarly discourse
...the imminent flood of
 scientific data expected
 from the next generation of
 experiments, simulations,
 sensors and satellites

      Tony Hey and Anne Trefethen
   Source: CERN, CERN-EX-0712023, http://cdsweb.cern.ch/record/1203203
BioEssays,, 26(1):99–105, January 2004




                                         http://research.microsoft.com/en-us/collaboration/fourthparadigm/
The Problem




                        
INT.   VERSE   VERSE BRIDG VERSE BRIDG VERSE O .
                          E           E       UT
Structural Analysis of Large Amounts of Music Information

    23,000 hours of   Digital Music
    recorded music
                       Collections      Music Information
                                        Retrieval Community



    Student-sourced               Community
      ground truth                 Software

                                Supercomputer


                      Linked Data
                      Repositories
http://www.bodleian.ox.ac.uk/bodley/library/special/projects/whats-the-score
PolicyGrid
                                      m                                  Current Nodes
                                  Rural communities
                                                                         Demonstrators
 DE Hubs                       DAMES d
                                                                         & Sustainability
                                    ds

 Harnessing advances in digital
                                       Social Inclusion
  technology and practice to
   achieve world-class social        highwire NeISS
                                      CQeSS Genesis
                                           s                             e-Social Science
research with maximum impact              m    MoSeS
                                                  m
                                   Obesity e-Lab ss
                                          HUB
                                       m       DReSS   Horizon
 DE DTCs                                       Creative Industries
                                                       Finance
                                                    mm
                                 d MiMeG Healthcare Genesis      Media
                                            OeSS GeoVUE
                                 mm eStat m              d               NCRM phase 3
                              Entertainment       m
                                          Web Science
                                      ncrmLifeGuide                      NCRM phase 2
                  www.digitalsocialresearch.net
New York   London     Paris             Moscow




               The Tweet-o-Meter
                              http://www.casa.ucl.ac.uk/tom/
A                          A




                                                   B
                             B                                                   F

                                          +    F


                                                             +           -
                             C
                                  -            E
                                                   C
                                                                             E




                                                                 D
                                      D




     Theories of                 Theories of               Theories of
     Self interest                Exchange                  Balance
            A
                                                                     A

 B                       F                             B                             F



 C
                +                                      C         - +                 E
                     E
                                                                     D

            D
                                                            Novice
                                                            Expert
  Theories of                    Theories of               Theories of
Collective Action                Homophily                 Cognition
Anatomy of an observatory
                   Install
     Query                        Subscribe
                  analytic




Data flows




             ongoing collection
1
    Web as lens


            2
3   Web as artefact
Framework for Responsible
Research and Innovation in ICT



 responsible-innovation.org.uk
SOCIAM
The Theory and Practice of
     Social Machines
The order of social machines
Real life is and must be full of all kinds of
social constraint – the very processes
from which society arises. Computers
can help if we use them to create
abstract social machines on the Web:
processes in which the people do the
creative work and the machine does the
administration… The stage is set for an
evolutionary growth of new social
engines.         Berners-Lee, Weaving the Web, 1999
An Example Social Machine
• The Kenyan election on the
  27th December 2007…
• wave of riots, killings and
  turmoil…
• African blogger Erik Hersman
  read a post by another blogger
  Ory Okolloh…
• Resulted in Ushahidi…
• “Nobody Knows Everything,
  but Everyone Knows
  Something.”
• Local observers to submit
  reports using the Web or SMS
  messages from mobile phones
The Zooniverse principles
1. Telling people about the      Versus…
   purpose of the research       • The Deficit model – the
   and about its context is a      layperson is irrational,
   good thing                      ignorant, and even
2. Treat participants as           intellectually vacuous
   collaborators not as          • Human-based computation
   subjects                        – a computer science
3. Do not waste people’s           technique in which a
   time                            computational process
4. All volunteers, and their       performs its function by
   contributions, are of equal     outsourcing certain steps to
   value to the project            humans
Some other machines?
Social Machines in Context
More machines


                Big Data       Social
                Big Compute    Machines

                Conventional   Social
                Computation    Networking

                        More people
www.einfrastructuresouth.ac.uk
explore.clarosnet.org
The users of a website, the website, and
the interactions between them, together
form our fundamental notion of a “machine”
 “Facebook for Scientists”        A probe into researcher
  ...but different to Facebook!     behaviour
 A repository of research         Open source (BSD) Ruby on
  methods                           Rails app
 A community social network of    REST and SPARQL interfaces,
  people and things                 supports Linked Data
 A Social Virtual Research        Influenced BioCatalogue,
  Environment                       MethodBox and SysMO-SEEK

 myExperiment currently has 307 groups, 2494 workflows, 643
 files and 250 packs - see wiki.myexperiment.org
method



 data
Research
 repeat     Record          repeat

Machine      paper          Machine

                          REPRODUCE




             paper
software                    software
Machine                     Machine
            Software
                          REPRODUCE OR REPEAT?



             paper
workflow                     workflow
               wf            software
software
Machine     Software         Machine

                       blogs.nature.com/eresearch/
http://force11.org/
The Executable Thesis


                        new data



                        executable
                          thesis
  PhD Student


                        new results
Discussion
• The underlying themes in this talk have been:
  – Web (co-constituted)
  – people (expert to lay)
  – computation (device to supercomputer)
  – automation / assistance
  – methods, reuse and value-add
• These reflect significant trends in our
  “knowledge infrastructure”, and significant
  opportunities for digital humanities
david.deroure@oerc.ox.ac.uk
www.oerc.ox.ac.uk/people/dder
blogs.nature.com/eresearch
@dder
Slide credits: Christine Borgman, Ichiro Fujinaga, Noshir Contractor, Marina
Jirotka, Nigel Shadbolt, Dave Robertson, Andrew Zisserman

http://www.slideshare.net/dder/advances-in-digital-scholarship
http://www.myexperiment.org/packs/313
Advances in Digital Scholarship

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Advances in Digital Scholarship

  • 2. Research “on” the Web • Web as an infrastructure for research • Web as a source of data • Web as a subject of research • Web of scholarly discourse
  • 3. ...the imminent flood of scientific data expected from the next generation of experiments, simulations, sensors and satellites Tony Hey and Anne Trefethen Source: CERN, CERN-EX-0712023, http://cdsweb.cern.ch/record/1203203
  • 4.
  • 5. BioEssays,, 26(1):99–105, January 2004 http://research.microsoft.com/en-us/collaboration/fourthparadigm/
  • 6. The Problem  INT. VERSE VERSE BRIDG VERSE BRIDG VERSE O . E E UT
  • 7. Structural Analysis of Large Amounts of Music Information 23,000 hours of Digital Music recorded music Collections Music Information Retrieval Community Student-sourced Community ground truth Software Supercomputer Linked Data Repositories
  • 9. PolicyGrid m Current Nodes Rural communities Demonstrators DE Hubs DAMES d & Sustainability ds Harnessing advances in digital Social Inclusion technology and practice to achieve world-class social highwire NeISS CQeSS Genesis s e-Social Science research with maximum impact m MoSeS m Obesity e-Lab ss HUB m DReSS Horizon DE DTCs Creative Industries Finance mm d MiMeG Healthcare Genesis Media OeSS GeoVUE mm eStat m d NCRM phase 3 Entertainment m Web Science ncrmLifeGuide NCRM phase 2 www.digitalsocialresearch.net
  • 10. New York London Paris Moscow The Tweet-o-Meter http://www.casa.ucl.ac.uk/tom/
  • 11. A A B B F + F + - C - E C E D D Theories of Theories of Theories of Self interest Exchange Balance A A B F B F C + C - + E E D D Novice Expert Theories of Theories of Theories of Collective Action Homophily Cognition
  • 12. Anatomy of an observatory Install Query Subscribe analytic Data flows ongoing collection
  • 13. 1 Web as lens 2 3 Web as artefact
  • 14. Framework for Responsible Research and Innovation in ICT responsible-innovation.org.uk
  • 15. SOCIAM The Theory and Practice of Social Machines
  • 16. The order of social machines Real life is and must be full of all kinds of social constraint – the very processes from which society arises. Computers can help if we use them to create abstract social machines on the Web: processes in which the people do the creative work and the machine does the administration… The stage is set for an evolutionary growth of new social engines. Berners-Lee, Weaving the Web, 1999
  • 17. An Example Social Machine • The Kenyan election on the 27th December 2007… • wave of riots, killings and turmoil… • African blogger Erik Hersman read a post by another blogger Ory Okolloh… • Resulted in Ushahidi… • “Nobody Knows Everything, but Everyone Knows Something.” • Local observers to submit reports using the Web or SMS messages from mobile phones
  • 18.
  • 19. The Zooniverse principles 1. Telling people about the Versus… purpose of the research • The Deficit model – the and about its context is a layperson is irrational, good thing ignorant, and even 2. Treat participants as intellectually vacuous collaborators not as • Human-based computation subjects – a computer science 3. Do not waste people’s technique in which a time computational process 4. All volunteers, and their performs its function by contributions, are of equal outsourcing certain steps to value to the project humans
  • 21. Social Machines in Context More machines Big Data Social Big Compute Machines Conventional Social Computation Networking More people
  • 24.
  • 25. The users of a website, the website, and the interactions between them, together form our fundamental notion of a “machine”
  • 26.  “Facebook for Scientists”  A probe into researcher ...but different to Facebook! behaviour  A repository of research  Open source (BSD) Ruby on methods Rails app  A community social network of  REST and SPARQL interfaces, people and things supports Linked Data  A Social Virtual Research  Influenced BioCatalogue, Environment MethodBox and SysMO-SEEK myExperiment currently has 307 groups, 2494 workflows, 643 files and 250 packs - see wiki.myexperiment.org
  • 28. Research repeat Record repeat Machine paper Machine REPRODUCE paper software software Machine Machine Software REPRODUCE OR REPEAT? paper workflow workflow wf software software Machine Software Machine blogs.nature.com/eresearch/
  • 30. The Executable Thesis new data executable thesis PhD Student new results
  • 31. Discussion • The underlying themes in this talk have been: – Web (co-constituted) – people (expert to lay) – computation (device to supercomputer) – automation / assistance – methods, reuse and value-add • These reflect significant trends in our “knowledge infrastructure”, and significant opportunities for digital humanities
  • 32. david.deroure@oerc.ox.ac.uk www.oerc.ox.ac.uk/people/dder blogs.nature.com/eresearch @dder Slide credits: Christine Borgman, Ichiro Fujinaga, Noshir Contractor, Marina Jirotka, Nigel Shadbolt, Dave Robertson, Andrew Zisserman http://www.slideshare.net/dder/advances-in-digital-scholarship http://www.myexperiment.org/packs/313

Editor's Notes

  1. CERN teams up with Leaders in Information Technology to build giant Data GridData accumulation rate: 10 Petabytes per year (equivalent to about 20 million CD-ROMs).http://public.web.cern.ch/press/pressreleases/Releases2001/PR11.01ECERNopenlab.html