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Bio. 230 --- Classification,
Taxonomy, Nomenclature
Taxonomy / Systematics / Classify
What are Taxonomy* and Systematics*?
What is a Phylogenetic Survey?
What is Phylogeny*?
What is Ontogeny*?
Basic Classification Hierarchy*
- DOMAIN
- KINGDOM
- DIVISION or PHYLUM
- CLASS
- ORDER
- FAMILY
- GENUS
- SPECIES
(many levels can have sublevels: e.g. subfamily)
Basic Classification Hierarchy
- DOMAIN (Eukarya)
- KINGDOM (Animalia)
- DIVISION or PHYLUM (Chordata)
- SUBPHYLUM (Vertebrata)
- CLASS (Mammalia)
- ORDER (Primate)
- FAMILY (Hominidae)
- GENUS (Homo)
- SPECIES (Homo sapiens)
(many levels can have sublevels: e.g. subfamily)
Taxon / Taxa
What is a TAXON* (pl. taxa)?????
NO ABSOLUTE way to determine if
something should be a genus, a
family or a phylum
Still there is much agreement as to
what goes in a group such as GREEN
ALGAE or FLOWERING PLANTS or
BACTERIA
Position in the Hierarchy
There is no ABSOLUTE rank in a hierarchy!
(No ABSOLUTE way to determine
position in a hierarchy)
Despite this most authorities are in
general agreement how to organize
species into higher taxa
An example (using families)
Solanaceae Sphecidae
How might “experts” differ in the
above examples?
The Species
The only taxon that has ‘biological
reality’
Human Beings (a species)
What is our scientific name?
Species: Homo sapiens Linnaeus
Genus: Homo
Specific Epithet: sapiens
Genus + Specific Epithet = Species
Author Citation: Linnaeus
Classify / Classification (I)
GOAL: a natural* classification
A Classification*: information storage
and retrieval system
What type of information to use?
Everything and anything
 (morphology, anatomy, distribution,
cytology, genetics, DNA homologies,
behaviors, etc.)
Classify / Classification (II)
Why do we look down on classification
activities and disciplines (taxonomy and
systematics)?
Why do classification schemes keep on
changing?
Why are taxonomy and systematics
more important than ever?
Nomenclature
Naming things
Why a system of Nomenclature*?
Why scientific names? Why not just
use common names?
Binomial System
Why latinized names?
Very specific rules --- Why is this important?
Rules (name endings, etc.) currently differ
for plants vs. animals --- Why?
Classification Hierarchy Revisited
- ALL LIVING THINGS (= Storage Building)
- DOMAIN (= a floor in the building)
- KINGDOM (= large storage room)
- DIVISION or PHYLUM (= file cabinet)
- CLASS (= drawer)
- ORDER (= large file folder)
- FAMILY (= smaller folder in
the large folder)
- GENUS (= stapled packet)
- SPECIES (= single page)
Changing (?) Classifications I
How many Kingdoms?????
Two Three Five Six
Plantae Protista* Monera Archaebacteria
Animalia Plantae Protista* Eubacteria
Animalia Fungi Protista*
Plantae Fungi
Animalia Plantae
Animalia
What is the difference?????
*Protista also known as Protoctista
Changing (?) Classifications II
Changing (?) Classifications III
The three DOMAIN system:
Not really that different
Archaea are in one domain
Bacteria are in the second domain
All eukaryotes are in the third domain
Kingdoms are the next subdivision
below the domain
The Protists
An ‘unnatural’ group
At the moment it is a ‘collect all’ (like
a junk drawer)
If it isn’t a plant, animal, fungus,
archaean or bacterium, then it is a
Protist
 In time, as we learn more, we will take
things out of this group and then there
may be more kingdoms, phyla, etc.
230-Classification-Systematics animal phylogeny.ppt

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230-Classification-Systematics animal phylogeny.ppt

  • 1. Bio. 230 --- Classification, Taxonomy, Nomenclature
  • 2. Taxonomy / Systematics / Classify What are Taxonomy* and Systematics*? What is a Phylogenetic Survey? What is Phylogeny*? What is Ontogeny*?
  • 3. Basic Classification Hierarchy* - DOMAIN - KINGDOM - DIVISION or PHYLUM - CLASS - ORDER - FAMILY - GENUS - SPECIES (many levels can have sublevels: e.g. subfamily)
  • 4. Basic Classification Hierarchy - DOMAIN (Eukarya) - KINGDOM (Animalia) - DIVISION or PHYLUM (Chordata) - SUBPHYLUM (Vertebrata) - CLASS (Mammalia) - ORDER (Primate) - FAMILY (Hominidae) - GENUS (Homo) - SPECIES (Homo sapiens) (many levels can have sublevels: e.g. subfamily)
  • 5. Taxon / Taxa What is a TAXON* (pl. taxa)????? NO ABSOLUTE way to determine if something should be a genus, a family or a phylum Still there is much agreement as to what goes in a group such as GREEN ALGAE or FLOWERING PLANTS or BACTERIA
  • 6. Position in the Hierarchy There is no ABSOLUTE rank in a hierarchy! (No ABSOLUTE way to determine position in a hierarchy) Despite this most authorities are in general agreement how to organize species into higher taxa An example (using families) Solanaceae Sphecidae How might “experts” differ in the above examples?
  • 7. The Species The only taxon that has ‘biological reality’ Human Beings (a species) What is our scientific name? Species: Homo sapiens Linnaeus Genus: Homo Specific Epithet: sapiens Genus + Specific Epithet = Species Author Citation: Linnaeus
  • 8. Classify / Classification (I) GOAL: a natural* classification A Classification*: information storage and retrieval system What type of information to use? Everything and anything  (morphology, anatomy, distribution, cytology, genetics, DNA homologies, behaviors, etc.)
  • 9. Classify / Classification (II) Why do we look down on classification activities and disciplines (taxonomy and systematics)? Why do classification schemes keep on changing? Why are taxonomy and systematics more important than ever?
  • 10. Nomenclature Naming things Why a system of Nomenclature*? Why scientific names? Why not just use common names? Binomial System Why latinized names? Very specific rules --- Why is this important? Rules (name endings, etc.) currently differ for plants vs. animals --- Why?
  • 11. Classification Hierarchy Revisited - ALL LIVING THINGS (= Storage Building) - DOMAIN (= a floor in the building) - KINGDOM (= large storage room) - DIVISION or PHYLUM (= file cabinet) - CLASS (= drawer) - ORDER (= large file folder) - FAMILY (= smaller folder in the large folder) - GENUS (= stapled packet) - SPECIES (= single page)
  • 12. Changing (?) Classifications I How many Kingdoms????? Two Three Five Six Plantae Protista* Monera Archaebacteria Animalia Plantae Protista* Eubacteria Animalia Fungi Protista* Plantae Fungi Animalia Plantae Animalia What is the difference????? *Protista also known as Protoctista
  • 14. Changing (?) Classifications III The three DOMAIN system: Not really that different Archaea are in one domain Bacteria are in the second domain All eukaryotes are in the third domain Kingdoms are the next subdivision below the domain
  • 15. The Protists An ‘unnatural’ group At the moment it is a ‘collect all’ (like a junk drawer) If it isn’t a plant, animal, fungus, archaean or bacterium, then it is a Protist  In time, as we learn more, we will take things out of this group and then there may be more kingdoms, phyla, etc.