SlideShare a Scribd company logo
1 of 14
Download to read offline
Peroxisomes/
Microbody/ Cytosome
IInd Semester
Zoology (Hons) 1st year
Cell Biology
-DR. RANJANA SETH
• Discovered by De Duve and his colleagues , Peroxisomes
are simple membrane bound vesicles with a diameter of 0.1
to 1.0 micrometers , which contains a dense , crystalline
core of oxidative enzymes
• Peroxisomes are multifunctional organelles containing more
than 50 enzymes involved in diverse activities.
• These organelles were so named because they are the site of
synthesis and degradation of hydrogen peroxide , a
highly reactive and toxic oxidizing agent.
• Unlike Lysosomes , peroxisomes
are NOT derived from E.R and
therefore are not a part of the
endomembrane system.
• Peroxisomes are found
ubiquitously in eukaryotic cells
and are especially prominent in
MAMMALIAN LIVER and
KIDNEY cells , in algae and
PHOTOSYNTHETIC CELLS
of plants and in
GERMINATING SEEDLINGS
of plant species that store fats in
their seeds.
• The role of peroxisomes are not
as well understood in animals as
they are in plant cells .
• The important enzymes present in peroxisomes are :
a) Catalase
b) D- amino acid oxidase
c) Urate oxidase
d) Glycolate oxidase
e) Luciferase
Regardless of where they occur , peroxisomes are
characterized by the presence of catalase , an enzyme that
plays a vital role in the breakdown of hydrogen per
oxide .
Hydrogen peroxide is a potentially toxic compound that is
formed in a variety of oxidative reactions catalysed by
oxidases (which are located in peroxidases along with
catalase) . Thus , the generation and degradation of
hydrogen peroxide occurs in the same organelle thereby
protecting the other parts of the cell from exposure to
this toxic compound .
• Functions of peroxisomes
A)Hydrogen peroxide metabolism:
The most obvious role of peroxisomes is
detoxification of hydrogen peroxide. The oxidases
present in peroxidases vary in the specific
reactions they catalyse but all of them share the
property of transferring electrons from their
specific substrates to oxygen and form hydrogen
peroxide .
The hydrogen peroxide formed is broken down by
the enzyme catalase in two ways:
1)Catalytic mode
2)Peroxidative mode
• Catalytic mode
• Usually catalase functions in this mode
in which one molecule of H2O2 is
oxidized to O2 and the second one is
reduced to water . The overall reaction
becomes :
RH2 +1/2O2→R +H2O
Peroxidative mode :
Alternately catalase functions in the
second mode in which hydrogen
peroxide is reduced to water using
electrons derieved from an organic
donor
The overall reaction becomes :
R`H2+RH2→ R+R`+ 2H2O
Catalase is the most abundant protein (
representing upto 15% of protein
content of the organelle) , thus every
molecule of hydrogen peroxide will
be promptly degraded .
B)Detoxification of toxic compounds :
• In its peroxidative mode catalase can use as
its electron donor a variety of substances
including methanol , ethanol , formic acid ,
formaldehyde , nitrites and phenols. Since
all these compounds are harmful to the cells ,
their detoxification by catalase is of vital
importance . Prominent peroxisomes of liver
and kidney are thought to be important in
such detoxification reactions.
C) Oxidation of fatty acids:
Peroxisomes in many animal tissues have
enzymes necessary to oxidize fatty acids.This
process called Beta-oxidation also occurs in
mitochondria. About 25-50%of the fatty acid
oxidation in animal tissues occurs in
peroxisomes and the rest in mitochondria.
Peroxisomal Beta-oxidation is especially
important in the catabolism of fatty acids with
especially long carbon chains.
D)Metabolism of nitrogen containing compounds
:
Peroxisomes of most animals except primates
contain an enzyme called urate oxidase (also
called uricase) needed to oxidize urate , a purine
formed during the catabolism of nucleic acids and
some proteins .
Urate +oxygen Allantoin+H2O2
For this oxygen is required and hydrogen peroxide
is formed ( which is then metabolised by catalase)
and allantoin is further metabolised and excreted
as allantoic acid .
• Other peroxisomal enzymes like
aminotransferases ( which catalyze the
transfer of amino group from amino acids to
alpha keto acids) help in the synthesis and
degradation of amino acids by moving amino
group from one molecule from another .
E)Breakdown of unusual substances :
Some of the substrates for peroxisomal oxidases
are rare compounds for which the cell has no
other degradative pathways such as D- Amino
acids which are not recognised by enzymes
which degrade L-Amino acids .
• Some fungi are capable of metabolising alkanes ,
short term hydrocarbon compounds found in oil
and other petroleum products .
• These fungi may be useful for cleaning up oil
spills that would otherwise contaminate the
environments.
Plant peroxisomes
• In plants and algae , peroxisomes are involved in several
specific aspects of energy metabolism
Leaf Peroxisomes
• Cells of leaves and other photosynthetic tissues are
characterized by the presence of large , prominent leaf
peroxisomes often seen in close contact with chloroplasts
and mitochondria .
• This spatial proximity reflects the mutual involvement
of these three organelles in photorespiration , a light
dependent process that occurs only in photosynthetic tissue.
• Photorespiration involves the uptake of oxygen and release
of carbondioxide thereby decreasing the net amount of
carbon converted into organic form by photosynthetic
tissue. Several of the key enzymes of photorespiration are
localized to leaf peroxisomes .
Glyoxysomes
• A functionally distinct type of plant peroxisomes occurs
transiently in seedlings of plant species that store carbon and
energy reserves in the seeds as fats , mainly triglycerides.
• In these species , stored triglycerides are metabolized and
converted to sucrose during post germinative development by
a sequence of events which includes Beta-oxidation of fatty
acids as well as glyoxylate cycle.
• All the enzymes needed for these process are localized to
specialized peroxisomes called Glyoxysomes .
• Glyoxysomes are found only in tissues in which fat is stored in
cotyledons or endosperm . They are present for a relatively
short period of time (a week or so ) required for the seedling to
deplete its supply of stored fats .
• Glyoxysomes have been reported to appear again in senescent
tissues of some plant species to degrade lipids derived from
the membranesof senescent cells.
Peroxisome biogenesis
• Like any other organelle , peroxisome
biogenesis occurs by the division of pre –
existing peroxisomes .
• This raises a question as to how the
enzymes and other proteins present in the
matrix or membranes get there ?
• The answer is that the proteins destined
for peroxisomes are synthesized not on
membrane bound ribosomes ( RER ) but
on the robosomes of the cytosol and then
enter preexisting peroxisomes as full
length polypeptides. A process mediated
by specific membrane proteins. This
mode of protein import is known as post
–translational protein import

More Related Content

Similar to 1585301966_Z(H)-II-Peroxisomes, microbodies and cytosome.pdf

Similar to 1585301966_Z(H)-II-Peroxisomes, microbodies and cytosome.pdf (20)

Peroxisomes
Peroxisomes Peroxisomes
Peroxisomes
 
Lipids
LipidsLipids
Lipids
 
Phase 1 metabolism.pptx
Phase 1 metabolism.pptxPhase 1 metabolism.pptx
Phase 1 metabolism.pptx
 
dr. ihsan alsaimary microbial nutrition and nutritional requirements
dr. ihsan alsaimary  microbial nutrition and nutritional requirementsdr. ihsan alsaimary  microbial nutrition and nutritional requirements
dr. ihsan alsaimary microbial nutrition and nutritional requirements
 
Basic metabolic
Basic metabolicBasic metabolic
Basic metabolic
 
Enzymes- Overview
Enzymes- OverviewEnzymes- Overview
Enzymes- Overview
 
Lysosome - Basics
Lysosome - BasicsLysosome - Basics
Lysosome - Basics
 
Peroxisome
PeroxisomePeroxisome
Peroxisome
 
Peroxisome
PeroxisomePeroxisome
Peroxisome
 
microbial nutrition and nutritional requirements dr. ihsan alsaimary
 microbial nutrition and nutritional requirements  dr. ihsan alsaimary microbial nutrition and nutritional requirements  dr. ihsan alsaimary
microbial nutrition and nutritional requirements dr. ihsan alsaimary
 
5- Enzymes.pptx church to churb ch cnn go
5- Enzymes.pptx church to churb ch cnn go5- Enzymes.pptx church to churb ch cnn go
5- Enzymes.pptx church to churb ch cnn go
 
Enzyme
EnzymeEnzyme
Enzyme
 
Biology
BiologyBiology
Biology
 
enzyme-191130180618.pdf
enzyme-191130180618.pdfenzyme-191130180618.pdf
enzyme-191130180618.pdf
 
Classification of secondary metabolites and their applications.
Classification of secondary metabolites and their applications.Classification of secondary metabolites and their applications.
Classification of secondary metabolites and their applications.
 
carbohydratesandtheirclassification-180212121619.pptx
carbohydratesandtheirclassification-180212121619.pptxcarbohydratesandtheirclassification-180212121619.pptx
carbohydratesandtheirclassification-180212121619.pptx
 
Peroxisome
PeroxisomePeroxisome
Peroxisome
 
Enzymes b.pharm
Enzymes b.pharmEnzymes b.pharm
Enzymes b.pharm
 
Chapter 4: 4.4 to 4.5
Chapter 4: 4.4 to 4.5Chapter 4: 4.4 to 4.5
Chapter 4: 4.4 to 4.5
 
Enzymes
EnzymesEnzymes
Enzymes
 

Recently uploaded

Transparency, Recognition and the role of eSealing - Ildiko Mazar and Koen No...
Transparency, Recognition and the role of eSealing - Ildiko Mazar and Koen No...Transparency, Recognition and the role of eSealing - Ildiko Mazar and Koen No...
Transparency, Recognition and the role of eSealing - Ildiko Mazar and Koen No...
EADTU
 
QUATER-1-PE-HEALTH-LC2- this is just a sample of unpacked lesson
QUATER-1-PE-HEALTH-LC2- this is just a sample of unpacked lessonQUATER-1-PE-HEALTH-LC2- this is just a sample of unpacked lesson
QUATER-1-PE-HEALTH-LC2- this is just a sample of unpacked lesson
httgc7rh9c
 
Personalisation of Education by AI and Big Data - Lourdes Guàrdia
Personalisation of Education by AI and Big Data - Lourdes GuàrdiaPersonalisation of Education by AI and Big Data - Lourdes Guàrdia
Personalisation of Education by AI and Big Data - Lourdes Guàrdia
EADTU
 

Recently uploaded (20)

COMMUNICATING NEGATIVE NEWS - APPROACHES .pptx
COMMUNICATING NEGATIVE NEWS - APPROACHES .pptxCOMMUNICATING NEGATIVE NEWS - APPROACHES .pptx
COMMUNICATING NEGATIVE NEWS - APPROACHES .pptx
 
Transparency, Recognition and the role of eSealing - Ildiko Mazar and Koen No...
Transparency, Recognition and the role of eSealing - Ildiko Mazar and Koen No...Transparency, Recognition and the role of eSealing - Ildiko Mazar and Koen No...
Transparency, Recognition and the role of eSealing - Ildiko Mazar and Koen No...
 
Wellbeing inclusion and digital dystopias.pptx
Wellbeing inclusion and digital dystopias.pptxWellbeing inclusion and digital dystopias.pptx
Wellbeing inclusion and digital dystopias.pptx
 
TỔNG HỢP HƠN 100 ĐỀ THI THỬ TỐT NGHIỆP THPT TOÁN 2024 - TỪ CÁC TRƯỜNG, TRƯỜNG...
TỔNG HỢP HƠN 100 ĐỀ THI THỬ TỐT NGHIỆP THPT TOÁN 2024 - TỪ CÁC TRƯỜNG, TRƯỜNG...TỔNG HỢP HƠN 100 ĐỀ THI THỬ TỐT NGHIỆP THPT TOÁN 2024 - TỪ CÁC TRƯỜNG, TRƯỜNG...
TỔNG HỢP HƠN 100 ĐỀ THI THỬ TỐT NGHIỆP THPT TOÁN 2024 - TỪ CÁC TRƯỜNG, TRƯỜNG...
 
FSB Advising Checklist - Orientation 2024
FSB Advising Checklist - Orientation 2024FSB Advising Checklist - Orientation 2024
FSB Advising Checklist - Orientation 2024
 
QUATER-1-PE-HEALTH-LC2- this is just a sample of unpacked lesson
QUATER-1-PE-HEALTH-LC2- this is just a sample of unpacked lessonQUATER-1-PE-HEALTH-LC2- this is just a sample of unpacked lesson
QUATER-1-PE-HEALTH-LC2- this is just a sample of unpacked lesson
 
UGC NET Paper 1 Unit 7 DATA INTERPRETATION.pdf
UGC NET Paper 1 Unit 7 DATA INTERPRETATION.pdfUGC NET Paper 1 Unit 7 DATA INTERPRETATION.pdf
UGC NET Paper 1 Unit 7 DATA INTERPRETATION.pdf
 
21st_Century_Skills_Framework_Final_Presentation_2.pptx
21st_Century_Skills_Framework_Final_Presentation_2.pptx21st_Century_Skills_Framework_Final_Presentation_2.pptx
21st_Century_Skills_Framework_Final_Presentation_2.pptx
 
Simple, Complex, and Compound Sentences Exercises.pdf
Simple, Complex, and Compound Sentences Exercises.pdfSimple, Complex, and Compound Sentences Exercises.pdf
Simple, Complex, and Compound Sentences Exercises.pdf
 
Including Mental Health Support in Project Delivery, 14 May.pdf
Including Mental Health Support in Project Delivery, 14 May.pdfIncluding Mental Health Support in Project Delivery, 14 May.pdf
Including Mental Health Support in Project Delivery, 14 May.pdf
 
How to Manage Call for Tendor in Odoo 17
How to Manage Call for Tendor in Odoo 17How to Manage Call for Tendor in Odoo 17
How to Manage Call for Tendor in Odoo 17
 
dusjagr & nano talk on open tools for agriculture research and learning
dusjagr & nano talk on open tools for agriculture research and learningdusjagr & nano talk on open tools for agriculture research and learning
dusjagr & nano talk on open tools for agriculture research and learning
 
Accessible Digital Futures project (20/03/2024)
Accessible Digital Futures project (20/03/2024)Accessible Digital Futures project (20/03/2024)
Accessible Digital Futures project (20/03/2024)
 
PANDITA RAMABAI- Indian political thought GENDER.pptx
PANDITA RAMABAI- Indian political thought GENDER.pptxPANDITA RAMABAI- Indian political thought GENDER.pptx
PANDITA RAMABAI- Indian political thought GENDER.pptx
 
When Quality Assurance Meets Innovation in Higher Education - Report launch w...
When Quality Assurance Meets Innovation in Higher Education - Report launch w...When Quality Assurance Meets Innovation in Higher Education - Report launch w...
When Quality Assurance Meets Innovation in Higher Education - Report launch w...
 
NO1 Top Black Magic Specialist In Lahore Black magic In Pakistan Kala Ilam Ex...
NO1 Top Black Magic Specialist In Lahore Black magic In Pakistan Kala Ilam Ex...NO1 Top Black Magic Specialist In Lahore Black magic In Pakistan Kala Ilam Ex...
NO1 Top Black Magic Specialist In Lahore Black magic In Pakistan Kala Ilam Ex...
 
diagnosting testing bsc 2nd sem.pptx....
diagnosting testing bsc 2nd sem.pptx....diagnosting testing bsc 2nd sem.pptx....
diagnosting testing bsc 2nd sem.pptx....
 
Personalisation of Education by AI and Big Data - Lourdes Guàrdia
Personalisation of Education by AI and Big Data - Lourdes GuàrdiaPersonalisation of Education by AI and Big Data - Lourdes Guàrdia
Personalisation of Education by AI and Big Data - Lourdes Guàrdia
 
Details on CBSE Compartment Exam.pptx1111
Details on CBSE Compartment Exam.pptx1111Details on CBSE Compartment Exam.pptx1111
Details on CBSE Compartment Exam.pptx1111
 
Ernest Hemingway's For Whom the Bell Tolls
Ernest Hemingway's For Whom the Bell TollsErnest Hemingway's For Whom the Bell Tolls
Ernest Hemingway's For Whom the Bell Tolls
 

1585301966_Z(H)-II-Peroxisomes, microbodies and cytosome.pdf

  • 1. Peroxisomes/ Microbody/ Cytosome IInd Semester Zoology (Hons) 1st year Cell Biology -DR. RANJANA SETH
  • 2. • Discovered by De Duve and his colleagues , Peroxisomes are simple membrane bound vesicles with a diameter of 0.1 to 1.0 micrometers , which contains a dense , crystalline core of oxidative enzymes • Peroxisomes are multifunctional organelles containing more than 50 enzymes involved in diverse activities. • These organelles were so named because they are the site of synthesis and degradation of hydrogen peroxide , a highly reactive and toxic oxidizing agent.
  • 3. • Unlike Lysosomes , peroxisomes are NOT derived from E.R and therefore are not a part of the endomembrane system. • Peroxisomes are found ubiquitously in eukaryotic cells and are especially prominent in MAMMALIAN LIVER and KIDNEY cells , in algae and PHOTOSYNTHETIC CELLS of plants and in GERMINATING SEEDLINGS of plant species that store fats in their seeds. • The role of peroxisomes are not as well understood in animals as they are in plant cells .
  • 4. • The important enzymes present in peroxisomes are : a) Catalase b) D- amino acid oxidase c) Urate oxidase d) Glycolate oxidase e) Luciferase Regardless of where they occur , peroxisomes are characterized by the presence of catalase , an enzyme that plays a vital role in the breakdown of hydrogen per oxide . Hydrogen peroxide is a potentially toxic compound that is formed in a variety of oxidative reactions catalysed by oxidases (which are located in peroxidases along with catalase) . Thus , the generation and degradation of hydrogen peroxide occurs in the same organelle thereby protecting the other parts of the cell from exposure to this toxic compound .
  • 5. • Functions of peroxisomes A)Hydrogen peroxide metabolism: The most obvious role of peroxisomes is detoxification of hydrogen peroxide. The oxidases present in peroxidases vary in the specific reactions they catalyse but all of them share the property of transferring electrons from their specific substrates to oxygen and form hydrogen peroxide . The hydrogen peroxide formed is broken down by the enzyme catalase in two ways: 1)Catalytic mode 2)Peroxidative mode
  • 6. • Catalytic mode • Usually catalase functions in this mode in which one molecule of H2O2 is oxidized to O2 and the second one is reduced to water . The overall reaction becomes : RH2 +1/2O2→R +H2O Peroxidative mode : Alternately catalase functions in the second mode in which hydrogen peroxide is reduced to water using electrons derieved from an organic donor The overall reaction becomes : R`H2+RH2→ R+R`+ 2H2O Catalase is the most abundant protein ( representing upto 15% of protein content of the organelle) , thus every molecule of hydrogen peroxide will be promptly degraded .
  • 7. B)Detoxification of toxic compounds : • In its peroxidative mode catalase can use as its electron donor a variety of substances including methanol , ethanol , formic acid , formaldehyde , nitrites and phenols. Since all these compounds are harmful to the cells , their detoxification by catalase is of vital importance . Prominent peroxisomes of liver and kidney are thought to be important in such detoxification reactions.
  • 8. C) Oxidation of fatty acids: Peroxisomes in many animal tissues have enzymes necessary to oxidize fatty acids.This process called Beta-oxidation also occurs in mitochondria. About 25-50%of the fatty acid oxidation in animal tissues occurs in peroxisomes and the rest in mitochondria. Peroxisomal Beta-oxidation is especially important in the catabolism of fatty acids with especially long carbon chains.
  • 9. D)Metabolism of nitrogen containing compounds : Peroxisomes of most animals except primates contain an enzyme called urate oxidase (also called uricase) needed to oxidize urate , a purine formed during the catabolism of nucleic acids and some proteins . Urate +oxygen Allantoin+H2O2 For this oxygen is required and hydrogen peroxide is formed ( which is then metabolised by catalase) and allantoin is further metabolised and excreted as allantoic acid .
  • 10. • Other peroxisomal enzymes like aminotransferases ( which catalyze the transfer of amino group from amino acids to alpha keto acids) help in the synthesis and degradation of amino acids by moving amino group from one molecule from another . E)Breakdown of unusual substances : Some of the substrates for peroxisomal oxidases are rare compounds for which the cell has no other degradative pathways such as D- Amino acids which are not recognised by enzymes which degrade L-Amino acids .
  • 11. • Some fungi are capable of metabolising alkanes , short term hydrocarbon compounds found in oil and other petroleum products . • These fungi may be useful for cleaning up oil spills that would otherwise contaminate the environments.
  • 12. Plant peroxisomes • In plants and algae , peroxisomes are involved in several specific aspects of energy metabolism Leaf Peroxisomes • Cells of leaves and other photosynthetic tissues are characterized by the presence of large , prominent leaf peroxisomes often seen in close contact with chloroplasts and mitochondria . • This spatial proximity reflects the mutual involvement of these three organelles in photorespiration , a light dependent process that occurs only in photosynthetic tissue. • Photorespiration involves the uptake of oxygen and release of carbondioxide thereby decreasing the net amount of carbon converted into organic form by photosynthetic tissue. Several of the key enzymes of photorespiration are localized to leaf peroxisomes .
  • 13. Glyoxysomes • A functionally distinct type of plant peroxisomes occurs transiently in seedlings of plant species that store carbon and energy reserves in the seeds as fats , mainly triglycerides. • In these species , stored triglycerides are metabolized and converted to sucrose during post germinative development by a sequence of events which includes Beta-oxidation of fatty acids as well as glyoxylate cycle. • All the enzymes needed for these process are localized to specialized peroxisomes called Glyoxysomes . • Glyoxysomes are found only in tissues in which fat is stored in cotyledons or endosperm . They are present for a relatively short period of time (a week or so ) required for the seedling to deplete its supply of stored fats . • Glyoxysomes have been reported to appear again in senescent tissues of some plant species to degrade lipids derived from the membranesof senescent cells.
  • 14. Peroxisome biogenesis • Like any other organelle , peroxisome biogenesis occurs by the division of pre – existing peroxisomes . • This raises a question as to how the enzymes and other proteins present in the matrix or membranes get there ? • The answer is that the proteins destined for peroxisomes are synthesized not on membrane bound ribosomes ( RER ) but on the robosomes of the cytosol and then enter preexisting peroxisomes as full length polypeptides. A process mediated by specific membrane proteins. This mode of protein import is known as post –translational protein import