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FOOTBALLOMICS1,2
by Ramy K. Aziz, PhD
What can football teach us about
genomics & the central dogma?
1 “Football” is synonymous to the word “soccer,” used in ≤ 1% of the world
2 Dedicated to Jonathan Eisen, PhD: A #Badomic a day keeps boredom away!
8 Mar 2015
Life informatics! The ‘Central Dogma’…
The Flow of Information In The Cell
DNA makes RNA makes Protein
DNA RNA Protein
1 GENOME n Transcriptomes ≥ n Proteomes
Proce-
ssing
Folding
etc..
transcriptn trn
Complex
Three lessons:
1) Life is all about proteins
2) If you’re a protein, there is no way back!
3) All the truth is in the genome, silent, waiting to be
expressed
Ramy K. Aziz (@azizrk): FootballOmics
What does football teach us about central dogma?
8 Mar 2015
Lesson #1:
18-25 players (genes) are
listed, but only 11 are
"transcribed" into the pitch and
those are the ones that are
likely to be "expressed"…
Ramy K. Aziz (@azizrk): FootballOmics
What does football teach us about central dogma?
8 Mar 2015 Ramy K. Aziz (@azizrk): FootballOmics
Lesson #2a:
The "game" is
highly
regulated:
Some players
may be
induced or
repressed in
the middle of
the game
What does football teach us about central dogma?
8 Mar 2015 Ramy K. Aziz (@azizrk): FootballOmics
Lesson #2b:
The "game" is highly regulated:
Most players are “differentially
expressed” at different time
points…
What does football teach us about central dogma?
8 Mar 2015 Ramy K. Aziz (@azizrk): FootballOmics
Lesson #3: the –omics
paradox
Genome vs. sum of its genes/
systems vs. reductionist view:
a team's outcome is not
necessarily equal to the
sum of its players efforts
What does football teach us about central dogma?
8 Mar 2015 Ramy K. Aziz (@azizrk): FootballOmics
Lesson #4a:
A players "function" is context
dependent: player-player
interactions are key to interpret the
overall outcome
What does football teach us about central dogma?
• Lesson #4b:
• A players "function" is context dependent. A protein
expressed in another bacterial host may behave very
differently.
Salah with Chelsea vs. Salah with Fiorentina
8 Mar 2015 Ramy K. Aziz (@azizrk): FootballOmics

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FootballOmics

  • 1. FOOTBALLOMICS1,2 by Ramy K. Aziz, PhD What can football teach us about genomics & the central dogma? 1 “Football” is synonymous to the word “soccer,” used in ≤ 1% of the world 2 Dedicated to Jonathan Eisen, PhD: A #Badomic a day keeps boredom away!
  • 2. 8 Mar 2015 Life informatics! The ‘Central Dogma’… The Flow of Information In The Cell DNA makes RNA makes Protein DNA RNA Protein 1 GENOME n Transcriptomes ≥ n Proteomes Proce- ssing Folding etc.. transcriptn trn Complex Three lessons: 1) Life is all about proteins 2) If you’re a protein, there is no way back! 3) All the truth is in the genome, silent, waiting to be expressed Ramy K. Aziz (@azizrk): FootballOmics
  • 3. What does football teach us about central dogma? 8 Mar 2015 Lesson #1: 18-25 players (genes) are listed, but only 11 are "transcribed" into the pitch and those are the ones that are likely to be "expressed"… Ramy K. Aziz (@azizrk): FootballOmics
  • 4. What does football teach us about central dogma? 8 Mar 2015 Ramy K. Aziz (@azizrk): FootballOmics Lesson #2a: The "game" is highly regulated: Some players may be induced or repressed in the middle of the game
  • 5. What does football teach us about central dogma? 8 Mar 2015 Ramy K. Aziz (@azizrk): FootballOmics Lesson #2b: The "game" is highly regulated: Most players are “differentially expressed” at different time points…
  • 6. What does football teach us about central dogma? 8 Mar 2015 Ramy K. Aziz (@azizrk): FootballOmics Lesson #3: the –omics paradox Genome vs. sum of its genes/ systems vs. reductionist view: a team's outcome is not necessarily equal to the sum of its players efforts
  • 7. What does football teach us about central dogma? 8 Mar 2015 Ramy K. Aziz (@azizrk): FootballOmics Lesson #4a: A players "function" is context dependent: player-player interactions are key to interpret the overall outcome
  • 8. What does football teach us about central dogma? • Lesson #4b: • A players "function" is context dependent. A protein expressed in another bacterial host may behave very differently. Salah with Chelsea vs. Salah with Fiorentina 8 Mar 2015 Ramy K. Aziz (@azizrk): FootballOmics