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Relationships between forest
    1




  structure measurements
              Peter Scarth
             John Armston
             Tim Danaher
              Rob Hasset
              John Carter

  Statewide Landcover and Trees Study
Outline
                                   C a n o p y S tru c tu re




                                     F ie ld S it e s &
                                        S a m p lin g




                   C lu m p in g                               L e a f A n g le




                                   C lu m p in g M o d e l                        LA I ↔ BA M odel
FPC ↔ CCP M odel




                                         Conclusions
Primary canopy structural measurements
Stand structure → 2 components
 Structural complexity
 Structural attributes
Structural attributes
 Projected Foliage Cover
 Projected Canopy Cover
 Basal Area
 Foliage clumping - Ω
 Leaf Area Index
 •LAI
 •LAIe → Leaf Angle & Ω
Measuring Canopies - Where
      139°                   142°                       145°                               148°              151°
                                                                                                                                   154°

18°                                                                                                                                18°




             X
             X
                                                                X
                                                                X        #

                                                               Charters Towers
             #
                 Mount Isa
21°                                                                                                                                21°




                                    X
                                    X                            X
                                                                 X
                                                                 X                                Rockhampton
                                                                                                         #
                                                #
                                                    Longreach
24°                                                                                                                                24°




                                            X
                                            X           X


                                                    X
                                                    X                                                                   X
                                                                                                                        XX
                                        X
                                        X
                                                                             Charleville                 X
                                                                                                         X
                                                                                                        X XX
                                                                                                        X X
                                                                     X
                                                                         #



27°
                                                X
                                                X
                                                X                                                                                  27°

                                                                                                                      X
                                                                                                                      X   #
                                                                                                                               X
                                                                                                                               X
                                                                                                                    Brisbane




                                                                                                                                   154°
      139°                   142°                       145°                               148°              151°
Measuring Canopies - Why
   Open Woodland           Woodland         Forest         Closed Forest
                  40

  Tall



                  30
         Height




                  20




                  10
  Low

Very Low

                  0
                       0     0.2      0.4            0.6     0.8           1
                                             FPC
Measuring Canopies - Sampling Methods
  Measurements
           Cover
           FPC
           Basal Area
           Clumping
  3 × 100m + Trac
Distance




                                            Branch
             Crown

                         Green

                                     Dead




 1                   1           1
 2                   1           1
 3                   1           1
 4                   1           1
 5                   1           1
 6                   1                               1
 7                   1           1
 8                   1           1
 9                   1           1
10                   1           1
Introduction to CCP ↔ FPC Model

Crowns ∈ Forest
 P( )=ccp
               − λπ r 2
 ccp = 1 − e

Leaves ∈ Crowns
 P( )=fpc
               − GΩL
 fpc = 1 − e
Leaves ∈ Forest
 P( )=P( )×P( )
              fpc
 ccp =                 Ψ
       1 − ( 1 − fpc ) Ω
Clumping in Forests
 CCP ↔ FPC relationship
depends on “clumping”
   Clumping (Ω,Ψ) is
 deviation from “Random”
   Modelled using Neyman


   ccpclumped
                = eb (ccp −1)
      ccp
Fitting the Clumping Ratio Model
Invert FPC↔CCP and fit – looks OK 
                                             Fitted Clumping Parameters
      1
                                                                                                                                       gold01_
                                                                                                                                            02
                                                                                                                                 gold02_ 03
                                                                                                                                   suns01_
                                                                                                                                      02

            Ω    log ( 1 − fpc )
              =                   = a ccp eb (ccp −1)                                                                 chin04_ 01
                                                                                                                          gold01_
                                                                                                                           chin03_
                                                                                                                            03 01

            Ψ
     0.8
                          fpc                                                                                suns01_
                                                                                                                    01
                                                                                                            gold02_ 01 02
                                                                                                               chin04_
                                                                                                                  01
                                                                                                                  adav02_
                log 1 −
                          ccp 
                                                                                                         chin04_
                                                                                                               04
                                                                                                       chin02_
                                                                                                            02
                                                                                                  chin02_
                                                                                                         03

     0.6
€€
€€
 €
 €
 1




                                                                             adav01_
                                                                                  03
                                                                         adav02_
                                                                               01
                                                                     chin01_ 01
                                                                         chin01_
                                                                     chin02_ 03
                                                                           01
                                                                           02
                                                                          aram02_
     0.4                                                      adav01_ 02
                                                                  chin04_
                                                                 1n 02
                                                             1r1a                      0.4
                                                            gunp01_
                                                                  02
                                                         2n 02
                                                    2a adav03_                         0.38
                                                sr chat01_
                                               2r adav03_
                                                       0301
                                       adav01_ 03
                                           quil02_
                                            01                                         0.36
     0.2                          quil01_
                                        01 01
                                                                                             b
                                       aram02_
                                 suns01_
                                       04                                              0.34
                               quil01_
                              quil02_04
                                    01
                              quil02_
                                   02
                    cade01_ 03
                           01 03
                        quil01_
                         gunp01_                                                       0.32
                   adav01_02
                     cade01_
                          04
                  quil01_ 04
                     quil02_
                         02
              adav03_03
                 chat01_
               aram02_
        aram02_ 02
             chat01_
               02
                     01
                      04                                                               0.3                   a
          gunp01_01
                                                                                              0.955 0.96 0.965 0.97 0.975 0.98 0.985
      0
                              0.2                      0.4                      0.6                          0.8                           1
                                                                  CCP
Fitted CCP ↔ FPC Model
               Apply clumping model to FPC↔CCP model
                         No analytical inversion – use root finding 
                         1                                                                                                                                                                                                                                                                                          gold02_   02
                                                                                                                                                                                                                                                                                                                                   gold01_   02
                                                                                                                                                                                                                                                                                                                                                              suns01_   03




                                                                                                                                                                                                                                                                                                              chin03_    01
                                                                                                                                                                                                                                                                                     gold01_    01


                                                                                                                                                                                                                                                         chin04_    03

                                                                                                                                                                                                                                                                                               adav02_   02

                                                                                                                                                                                                                                                                    chin04_   01
                                                                                                                                                                                                                          suns01_         01
                                                                                                                                                                                                                           gold02_          01
Projected Crown Cover




                        0.8
                                                                                                                                                                                                                                               chin04_         04

                                                                                                                                                                                                                               chin02_           02


                                                                                                                                                                                                                                         chin02_          03




                        0.6                                                                                                                                                     adav01_         03



                                                                                                                                                                                                                                                                                                                                      fpc
                                                                                                                                                                                                                                                         ccp =
                                                                                                                                                                                                                     aram02_        03
                                                                                                                                                                                     adav02_         01
                                                                                                                                                                                                      chin01_   01


                                                                                                                                                              chin02_
                                                                                                                                                              chin01_          02
                                                                                                                                                                                01




                                                                                                                                                                                                                                                                                                                                                    a ccp eb (ccp −1)
                                                                                                                                                                                                                                                                                   1 − ( 1 − fpc )
                                                                                                                                                           chin04_        02


                                                                                                                             adav01_          102 n

                                                                                                                                        1 a                               gunp01_          02
                                                                                                                                       1 r


                                                                                                                                                      adav03_        02


                        0.4
                                                                                                                                   2    n

                                                                                                                                   chat01_            01

                                                                                                                        adav03_         03
                                                                                                   2 a



                                                                             sr              2 r
                                                                                                         quil02_        03



                                                                     adav01_            01                    aram02_         01

                                                                                                                                                                                                                                                                                                                                                        Basal Area
                                                                                                                                                                                                                                                                                                                                                         50
                                                                  quil01_            01
                                                                                 suns01_        04
                                                                                   quil01_        04
                                                                                quil02_        01


                        0.2
                                                                                quil02_        02



                                                                            gunp01_           03
                                                                 quil01_        03

                                     cade01_       01
                                                  adav01_
                                                           cade01_
                                                               quil02_

                                                      quil01_ 04 02
                                                                           02
                                                                                04
                                                                                                                                                                                                                                                                                                                                                         30
                                                       chat01_      03
                                                   aram02_       04
                                               adav03_       01
                                                 chat01_      02




                                                                                                                                                                                                                                                                                                                                                         10
                                               gunp01_      01
                                  aram02_        02




                         0
                              0                                                                                     0.2                                                                                                  0.4                                                        0.6                                                           0.8                        1
                                                                                                                                                                                                Projected Foliage Cover
Measuring Clumping (Ω)




                                                    L a rge C a n o p y G a p          C o n tin u o u s C a n o p y L a y e r        G a p in te r s p e r s e d w ith s m a ll c a n o p ie s


                                             1800


                                             1500
Trac
               Downwelling PAR (mMol/s/m2)




                                             1200
   Measures
canopy “gaps”                                900


   Compares                                  600

distribution to
                                             300
“Random”
   Difference is                                0
                                                    33               35         37          39                 41                43                 45                  47                 49
clumping Ω                                                                           Distance along transect (m)
Fitting Trac Omega (Ω) ↔ Clumping Model
                  1


                                                                                                 Omega ↔ CCP
Trac Clumping




                                                                                                modelled clumping
                0.95




                0.9                                                                                There is a fit but…
                                                                                                   Omega is a function
                0.85
                                                                                                 of Zenith!
                           0.88      0.9       0.92                           0.94       0.96
                                    Modelled Clumping


      Correct for                                                          1.02
                                                      Clumping Correction




    zenith
                       Zenith ↔ residuals                                   1.00


                       •Try 1st to 4th order fits
                       •3rd is best (⇓ error σ2)                            0.98
                       •Agrees with published
                       work (Chen)                                                  0    12      24          36
                                                                                                       Zenith Angle
                                                                                                                      48   60
Improved Omega (Ω) ↔ Clumping Model
            Same Relationship but improved confidence 
                   But limited number & variety of sites 
                  1




                0.95
Trac Clumping




                0.9




                0.85




                       0.86    0.88      0.9        0.92     0.94   0.96
                                         Modelled Clumping
Clumping ↔ CCP Models
           Can recover within canopy clumping (Ψ)
             Possible clumping > 1 implies “Regularity” (overdispersion)
                                            Clumping Factors
             1




           0.95



                            Global (Ω)
            0.9
Clumping




           0.85



                                Crown (Ψ)
            0.8



                                                        Ψ        eb (1−ccp)
           0.75
                                                   Ψ = Ω = Ωtrac
                                                        Ω         a ccp
            0.7
                  0       0.2                0.4               0.6   0.8      1

                                                   CCP
LAI ↔ Basal Area
Theoretical models → more leaf ≈ more BA
 Log(LAI) = a + b log(BA)
 •As reported in literature
 LAI = a BAb
 •b ⇒ 1                              4



 ∴LAI = a BA
 •Significant                        3
                Effective LAI (LΩ)




 outliers 
                                     2




                                     1

                                                                     log(1 −fpc)
                                                                LΩ=−
                                     0                                G →0.5

                                         0        10       20         30     40

                                                       Basal Area
Leaf Angle Distribution ↔ Basal Area
                                                 Estimate G from Trac & Field Data
                                                      Pushing data to its limits 
                                                      Poor fit but sensible result



                                           0.8
                      Leaf Angle Distribution


                                                                                             50o
                                           0.6




                                                     70o
                                           0.4

                                                                                       57o
             fpc 
     log 1 −
             ccp 
                  
G =−                                       0.2

           LΨ
                                                 0           10        20         30               40

                                                                     Basal Area
Leaf Angle Corrected LAI ↔ Basal Area
Slightly different estimator
 Improved confidence 
 High BA site has “flatter” leaves

                                   log(1 − fpc)
                    4       LΩ = −
                                    a + b BA
   Effective LAI (LΩ)




                    3




                    2




                    1




                    0




                        0          10             20       30   40

                                              Basal Area
FPC ↔ Basal Area Nonlinear Fit
  Final model has simple form 
       But still has wide confidence intervals on Statewide data 
       1
                                 BA
                          −

      0.8
            fpc = 1 − e       a + b BA



      0.6
FPC




      0.4
                                                                   CCP
                                                                 100%
      0.2
                                                                 60%

                                                                 20%


            0       10               20                30   40           50
                                          Basal Area
FPC ↔ LAI Final Relationship
                  We have estimated G and Ω
                      LAI ≈ 1.7 as FPC ⇒ 0 ∴ Mature trees have leaves 


                        fpc = 1 − e − GΩL
                  8
Leaf Area Index




                                                               Steeper Leaf Angles ≈ 70o

                  6

                        Within
                       Canopy
                      FPC≈ 50%
                  4


                                 Fitted Leaf Angles ≈ 70o to 50o

                  2

                                                                   Shallower Leaf Angles ≈ 50o
                                 0.2              0.4              0.6            0.8

                                                         FPC
Conclusions & Future Work
  Canopy parameters are interrelated
    Probably different for regrowth – Sample?
  No single “best” structure measure
  Leaf scale parameters important
    LAI & Leaf Angle
    Clumping
Thanks to:
 Rob Hasset
   Site selection & photography
 Sel Counter-
   Field campaign
 Slatters
   Additional field sites

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Relationships between forest structure measurements

  • 1. Relationships between forest 1 structure measurements Peter Scarth John Armston Tim Danaher Rob Hasset John Carter Statewide Landcover and Trees Study
  • 2. Outline C a n o p y S tru c tu re F ie ld S it e s & S a m p lin g C lu m p in g L e a f A n g le C lu m p in g M o d e l LA I ↔ BA M odel FPC ↔ CCP M odel Conclusions
  • 3. Primary canopy structural measurements Stand structure → 2 components Structural complexity Structural attributes Structural attributes Projected Foliage Cover Projected Canopy Cover Basal Area Foliage clumping - Ω Leaf Area Index •LAI •LAIe → Leaf Angle & Ω
  • 4. Measuring Canopies - Where 139° 142° 145° 148° 151° 154° 18° 18° X X X X # Charters Towers # Mount Isa 21° 21° X X X X X Rockhampton # # Longreach 24° 24° X X X X X X XX X X Charleville X X X XX X X X # 27° X X X 27° X X # X X Brisbane 154° 139° 142° 145° 148° 151°
  • 5. Measuring Canopies - Why Open Woodland Woodland Forest Closed Forest 40 Tall 30 Height 20 10 Low Very Low 0 0 0.2 0.4 0.6 0.8 1 FPC
  • 6. Measuring Canopies - Sampling Methods Measurements Cover FPC Basal Area Clumping 3 × 100m + Trac Distance Branch Crown Green Dead 1 1 1 2 1 1 3 1 1 4 1 1 5 1 1 6 1 1 7 1 1 8 1 1 9 1 1 10 1 1
  • 7. Introduction to CCP ↔ FPC Model Crowns ∈ Forest P( )=ccp − λπ r 2 ccp = 1 − e Leaves ∈ Crowns P( )=fpc − GΩL fpc = 1 − e Leaves ∈ Forest P( )=P( )×P( ) fpc ccp = Ψ 1 − ( 1 − fpc ) Ω
  • 8. Clumping in Forests CCP ↔ FPC relationship depends on “clumping” Clumping (Ω,Ψ) is deviation from “Random” Modelled using Neyman ccpclumped = eb (ccp −1) ccp
  • 9. Fitting the Clumping Ratio Model Invert FPC↔CCP and fit – looks OK  Fitted Clumping Parameters 1 gold01_ 02 gold02_ 03 suns01_ 02 Ω log ( 1 − fpc ) = = a ccp eb (ccp −1) chin04_ 01 gold01_ chin03_ 03 01 Ψ 0.8  fpc  suns01_ 01 gold02_ 01 02 chin04_ 01 adav02_ log 1 − ccp  chin04_ 04 chin02_ 02   chin02_ 03 0.6 €€ €€ € € 1 adav01_ 03 adav02_ 01 chin01_ 01 chin01_ chin02_ 03 01 02 aram02_ 0.4 adav01_ 02 chin04_ 1n 02 1r1a 0.4 gunp01_ 02 2n 02 2a adav03_ 0.38 sr chat01_ 2r adav03_ 0301 adav01_ 03 quil02_ 01 0.36 0.2 quil01_ 01 01 b aram02_ suns01_ 04 0.34 quil01_ quil02_04 01 quil02_ 02 cade01_ 03 01 03 quil01_ gunp01_ 0.32 adav01_02 cade01_ 04 quil01_ 04 quil02_ 02 adav03_03 chat01_ aram02_ aram02_ 02 chat01_ 02 01 04 0.3 a gunp01_01 0.955 0.96 0.965 0.97 0.975 0.98 0.985 0 0.2 0.4 0.6 0.8 1 CCP
  • 10. Fitted CCP ↔ FPC Model Apply clumping model to FPC↔CCP model No analytical inversion – use root finding  1 gold02_ 02 gold01_ 02 suns01_ 03 chin03_ 01 gold01_ 01 chin04_ 03 adav02_ 02 chin04_ 01 suns01_ 01 gold02_ 01 Projected Crown Cover 0.8 chin04_ 04 chin02_ 02 chin02_ 03 0.6 adav01_ 03 fpc ccp = aram02_ 03 adav02_ 01 chin01_ 01 chin02_ chin01_ 02 01 a ccp eb (ccp −1) 1 − ( 1 − fpc ) chin04_ 02 adav01_ 102 n 1 a gunp01_ 02 1 r adav03_ 02 0.4 2 n chat01_ 01 adav03_ 03 2 a sr 2 r quil02_ 03 adav01_ 01 aram02_ 01 Basal Area 50 quil01_ 01 suns01_ 04 quil01_ 04 quil02_ 01 0.2 quil02_ 02 gunp01_ 03 quil01_ 03 cade01_ 01 adav01_ cade01_ quil02_ quil01_ 04 02 02 04 30 chat01_ 03 aram02_ 04 adav03_ 01 chat01_ 02 10 gunp01_ 01 aram02_ 02 0 0 0.2 0.4 0.6 0.8 1 Projected Foliage Cover
  • 11. Measuring Clumping (Ω) L a rge C a n o p y G a p C o n tin u o u s C a n o p y L a y e r G a p in te r s p e r s e d w ith s m a ll c a n o p ie s 1800 1500 Trac Downwelling PAR (mMol/s/m2) 1200 Measures canopy “gaps” 900 Compares 600 distribution to 300 “Random” Difference is 0 33 35 37 39 41 43 45 47 49 clumping Ω Distance along transect (m)
  • 12. Fitting Trac Omega (Ω) ↔ Clumping Model 1 Omega ↔ CCP Trac Clumping modelled clumping 0.95 0.9 There is a fit but… Omega is a function 0.85 of Zenith! 0.88 0.9 0.92 0.94 0.96 Modelled Clumping Correct for  1.02 Clumping Correction zenith Zenith ↔ residuals 1.00 •Try 1st to 4th order fits •3rd is best (⇓ error σ2) 0.98 •Agrees with published work (Chen)  0 12 24 36 Zenith Angle 48 60
  • 13. Improved Omega (Ω) ↔ Clumping Model Same Relationship but improved confidence  But limited number & variety of sites  1 0.95 Trac Clumping 0.9 0.85 0.86 0.88 0.9 0.92 0.94 0.96 Modelled Clumping
  • 14. Clumping ↔ CCP Models Can recover within canopy clumping (Ψ) Possible clumping > 1 implies “Regularity” (overdispersion) Clumping Factors 1 0.95 Global (Ω) 0.9 Clumping 0.85 Crown (Ψ) 0.8 Ψ eb (1−ccp) 0.75 Ψ = Ω = Ωtrac Ω a ccp 0.7 0 0.2 0.4 0.6 0.8 1 CCP
  • 15. LAI ↔ Basal Area Theoretical models → more leaf ≈ more BA Log(LAI) = a + b log(BA) •As reported in literature LAI = a BAb •b ⇒ 1 4 ∴LAI = a BA •Significant 3 Effective LAI (LΩ) outliers  2 1 log(1 −fpc) LΩ=− 0 G →0.5 0 10 20 30 40 Basal Area
  • 16. Leaf Angle Distribution ↔ Basal Area Estimate G from Trac & Field Data Pushing data to its limits  Poor fit but sensible result 0.8 Leaf Angle Distribution 50o 0.6 70o 0.4 57o  fpc  log 1 −  ccp   G =− 0.2 LΨ 0 10 20 30 40 Basal Area
  • 17. Leaf Angle Corrected LAI ↔ Basal Area Slightly different estimator Improved confidence  High BA site has “flatter” leaves log(1 − fpc) 4 LΩ = − a + b BA Effective LAI (LΩ) 3 2 1 0 0 10 20 30 40 Basal Area
  • 18. FPC ↔ Basal Area Nonlinear Fit Final model has simple form  But still has wide confidence intervals on Statewide data  1 BA − 0.8 fpc = 1 − e a + b BA 0.6 FPC 0.4 CCP 100% 0.2 60% 20% 0 10 20 30 40 50 Basal Area
  • 19. FPC ↔ LAI Final Relationship We have estimated G and Ω LAI ≈ 1.7 as FPC ⇒ 0 ∴ Mature trees have leaves  fpc = 1 − e − GΩL 8 Leaf Area Index Steeper Leaf Angles ≈ 70o 6 Within Canopy FPC≈ 50% 4 Fitted Leaf Angles ≈ 70o to 50o 2 Shallower Leaf Angles ≈ 50o 0.2 0.4 0.6 0.8 FPC
  • 20. Conclusions & Future Work Canopy parameters are interrelated Probably different for regrowth – Sample? No single “best” structure measure Leaf scale parameters important LAI & Leaf Angle Clumping Thanks to: Rob Hasset Site selection & photography Sel Counter- Field campaign Slatters Additional field sites

Editor's Notes

  1. Mature Forest Types Time taken Transect Trac Issues in other areas? When? Trac Optimal Time FPC / Leaf angle short term variability
  2. Clumping Define Demonstrate Neyman model development Fitting Clumping Factor
  3. Clumping Define Demonstrate Neyman model development Fitting Clumping Factor
  4. Final function fit Rootfinding and stability Confidence Intervals MontiCarlo Credible Intervals Where wetter/dryer points move
  5. Describe instrument
  6. Angle dependence How derived from field and trac data Why BA used Fit Statistics